RNA–Protein interactions for RNA: ENST00000474962.1

CLIP2-204, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 3

Gene CLIP2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-204ENST00000474962 EPB41L2O43491 1005 aaKnown RBP13.84□□□□□ -0.19
CLIP2-204ENST00000474962 CYP21A2P08686 494 aa13.84□□□□□ -0.19
CLIP2-204ENST00000474962 SNHG28P0DPA3 235 aa13.84□□□□□ -0.19
CLIP2-204ENST00000474962 RAG1P15918 1043 aa13.84□□□□□ -0.19
CLIP2-204ENST00000474962 SMPD1P17405 629 aa13.84□□□□□ -0.19
CLIP2-204ENST00000474962 CST5P28325 142 aaPredicted RBP13.84□□□□□ -0.19
CLIP2-204ENST00000474962 NT5C2P49902 561 aa13.84□□□□□ -0.19
CLIP2-204ENST00000474962 CREB3L3Q68CJ9 461 aa13.84□□□□□ -0.19
CLIP2-204ENST00000474962 DGKHQ86XP1 1220 aa13.84□□□□□ -0.19
CLIP2-204ENST00000474962 PCSK9Q8NBP7 692 aaKnown RBP13.84□□□□□ -0.19
CLIP2-204ENST00000474962 CLEC4DQ8WXI8 215 aa13.84□□□□□ -0.19
CLIP2-204ENST00000474962 GLT1D1Q96MS3 346 aa13.84□□□□□ -0.19
CLIP2-204ENST00000474962 TOX2Q96NM4 488 aa13.84□□□□□ -0.19
CLIP2-204ENST00000474962 MTMR10Q9NXD2 777 aa13.84□□□□□ -0.19
CLIP2-204ENST00000474962 GNEQ9Y223 722 aaKnown RBP13.84□□□□□ -0.19
CLIP2-204ENST00000474962 PTPDC1A2A3K4 754 aa13.83□□□□□ -0.2
CLIP2-204ENST00000474962 SLC27A2O14975 620 aa13.83□□□□□ -0.2
CLIP2-204ENST00000474962 NECTIN1Q15223 517 aa13.83□□□□□ -0.2
CLIP2-204ENST00000474962 IQSEC1Q6DN90 963 aa13.83□□□□□ -0.2
CLIP2-204ENST00000474962 FBXO16Q8IX29 292 aaPredicted RBP13.83□□□□□ -0.2
CLIP2-204ENST00000474962 NCOA7Q8NI08 942 aa13.83□□□□□ -0.2
CLIP2-204ENST00000474962 ANKS1AQ92625 1134 aa13.83□□□□□ -0.2
CLIP2-204ENST00000474962 UPF2Q9HAU5 1272 aaKnown RBP13.83□□□□□ -0.2
CLIP2-204ENST00000474962 ELP1O95163 1332 aa13.83□□□□□ -0.2
CLIP2-204ENST00000474962 E7EWF7 191 aa13.82□□□□□ -0.2
CLIP2-204ENST00000474962 ARVCFO00192 962 aa13.82□□□□□ -0.2
CLIP2-204ENST00000474962 ABCB7O75027 752 aa13.82□□□□□ -0.2
CLIP2-204ENST00000474962 CALML3P27482 149 aa13.82□□□□□ -0.2
CLIP2-204ENST00000474962 NKX3-2P78367 333 aa13.82□□□□□ -0.2
CLIP2-204ENST00000474962 KRT32Q14532 448 aa13.82□□□□□ -0.2
CLIP2-204ENST00000474962 CCDC178Q5BJE1 867 aa13.82□□□□□ -0.2
CLIP2-204ENST00000474962 CXCL17Q6UXB2 119 aa13.82□□□□□ -0.2
CLIP2-204ENST00000474962 IQCA1Q86XH1 822 aa13.82□□□□□ -0.2
CLIP2-204ENST00000474962 PNMA1Q8ND90 353 aa13.82□□□□□ -0.2
CLIP2-204ENST00000474962 MORC4Q8TE76 937 aa13.82□□□□□ -0.2
CLIP2-204ENST00000474962 TBC1D5Q92609 795 aa13.82□□□□□ -0.2
CLIP2-204ENST00000474962 FAM161BQ96MY7 647 aa13.82□□□□□ -0.2
CLIP2-204ENST00000474962 ZSCAN10Q96SZ4 725 aaPredicted RBP13.82□□□□□ -0.2
CLIP2-204ENST00000474962 USP26Q9BXU7 913 aa13.82□□□□□ -0.2
CLIP2-204ENST00000474962 CDH23Q9H251 3354 aa13.82□□□□□ -0.2
CLIP2-204ENST00000474962 TIMP1P01033 207 aa13.81□□□□□ -0.2
CLIP2-204ENST00000474962 RPS6P62753 249 aaKnown RBP13.81□□□□□ -0.2
CLIP2-204ENST00000474962 FSCN1Q16658 493 aaKnown RBP13.81□□□□□ -0.2
CLIP2-204ENST00000474962 USH1GQ495M9 461 aa13.81□□□□□ -0.2
CLIP2-204ENST00000474962 SLC30A10Q6XR72 485 aa13.81□□□□□ -0.2
CLIP2-204ENST00000474962 RNF207Q6ZRF8 634 aa13.81□□□□□ -0.2
CLIP2-204ENST00000474962 TLK2Q86UE8 772 aa13.81□□□□□ -0.2
CLIP2-204ENST00000474962 ENAHQ8N8S7 591 aaPredicted RBP13.81□□□□□ -0.2
CLIP2-204ENST00000474962 SLC17A8Q8NDX2 589 aa13.81□□□□□ -0.2
CLIP2-204ENST00000474962 AP5M1Q9H0R1 490 aa13.81□□□□□ -0.2
CLIP2-204ENST00000474962 KAT14Q9H8E8 782 aa13.81□□□□□ -0.2
CLIP2-204ENST00000474962 VAT1LQ9HCJ6 419 aa13.81□□□□□ -0.2
CLIP2-204ENST00000474962 GRIN2DO15399 1336 aa13.81□□□□□ -0.2
CLIP2-204ENST00000474962 A0A0U1RQG5 324 aaPredicted RBP13.8□□□□□ -0.2
CLIP2-204ENST00000474962 ERICH2A1L162 156 aa13.8□□□□□ -0.2
CLIP2-204ENST00000474962 HSPA4P34932 840 aa13.8□□□□□ -0.2
CLIP2-204ENST00000474962 ALDH5A1P51649 535 aaPredicted RBP13.8□□□□□ -0.2
CLIP2-204ENST00000474962 FPGSQ05932 587 aa13.8□□□□□ -0.2
CLIP2-204ENST00000474962 SART3Q15020 963 aaKnown RBP13.8□□□□□ -0.2
CLIP2-204ENST00000474962 C8orf34Q49A92 452 aa13.8□□□□□ -0.2
CLIP2-204ENST00000474962 GPATCH4Q5T3I0 446 aaKnown RBP13.8□□□□□ -0.2
CLIP2-204ENST00000474962 C16orf59Q7L2K0 433 aa13.8□□□□□ -0.2
CLIP2-204ENST00000474962 ADGRF4Q8IZF3 695 aa13.8□□□□□ -0.2
CLIP2-204ENST00000474962 UBAC1Q9BSL1 405 aa13.8□□□□□ -0.2
CLIP2-204ENST00000474962 WDR11Q9BZH6 1224 aa13.8□□□□□ -0.2
CLIP2-204ENST00000474962 VTA1Q9NP79 307 aa13.8□□□□□ -0.2
CLIP2-204ENST00000474962 ADD3Q9UEY8 706 aaKnown RBP13.8□□□□□ -0.2
CLIP2-204ENST00000474962 TBX21Q9UL17 535 aa13.8□□□□□ -0.2
CLIP2-204ENST00000474962 LTBP2Q14767 1821 aa13.79□□□□□ -0.2
CLIP2-204ENST00000474962 LAMA4Q16363 1823 aa13.79□□□□□ -0.2
CLIP2-204ENST00000474962 PSMA5P28066 241 aa13.79□□□□□ -0.2
CLIP2-204ENST00000474962 PSMC6P62333 389 aa13.79□□□□□ -0.2
CLIP2-204ENST00000474962 ITGA7Q13683 1181 aa13.79□□□□□ -0.2
CLIP2-204ENST00000474962 DUSP28Q4G0W2 176 aa13.79□□□□□ -0.2
CLIP2-204ENST00000474962 FAM109BQ6ICB4 259 aaPredicted RBP13.79□□□□□ -0.2
CLIP2-204ENST00000474962 MFSD5Q6N075 450 aa13.79□□□□□ -0.2
CLIP2-204ENST00000474962 CYB5R4Q7L1T6 521 aa13.79□□□□□ -0.2
CLIP2-204ENST00000474962 FAM126BQ8IXS8 530 aa13.79□□□□□ -0.2
CLIP2-204ENST00000474962 SLC43A3Q8NBI5 491 aa13.79□□□□□ -0.2
CLIP2-204ENST00000474962 GUCD1Q96NT3 240 aa13.79□□□□□ -0.2
CLIP2-204ENST00000474962 STXBP5LQ9Y2K9 1186 aa13.79□□□□□ -0.2
CLIP2-204ENST00000474962 Q9Y3F1 56 aa13.79□□□□□ -0.2
CLIP2-204ENST00000474962 TNKSO95271 1327 aa13.79□□□□□ -0.2
CLIP2-204ENST00000474962 CHD9Q3L8U1 2897 aa13.78□□□□□ -0.2
CLIP2-204ENST00000474962 SPDYE4A6NLX3 237 aa13.78□□□□□ -0.2
CLIP2-204ENST00000474962 CD4P01730 458 aa13.78□□□□□ -0.2
CLIP2-204ENST00000474962 HMGB1P09429 215 aaKnown RBP13.78□□□□□ -0.2
CLIP2-204ENST00000474962 MCM5P33992 734 aa13.78□□□□□ -0.2
CLIP2-204ENST00000474962 TSGA10IPQ3SY00 556 aa13.78□□□□□ -0.2
CLIP2-204ENST00000474962 STAG2Q8N3U4 1231 aa13.78□□□□□ -0.2
CLIP2-204ENST00000474962 RGS22Q8NE09 1264 aa13.78□□□□□ -0.2
CLIP2-204ENST00000474962 RNPC3Q96LT9 517 aaKnown RBP13.78□□□□□ -0.2
CLIP2-204ENST00000474962 NEK1Q96PY6 1258 aa13.78□□□□□ -0.2
CLIP2-204ENST00000474962 TRPV6Q9H1D0 765 aa13.78□□□□□ -0.2
CLIP2-204ENST00000474962 SEMA6BQ9H3T3 888 aa13.78□□□□□ -0.2
CLIP2-204ENST00000474962 JMJD4Q9H9V9 463 aa13.78□□□□□ -0.2
CLIP2-204ENST00000474962 PNMA2Q9UL42 364 aa13.78□□□□□ -0.2
CLIP2-204ENST00000474962 TAF6LQ9Y6J9 622 aa13.78□□□□□ -0.2
CLIP2-204ENST00000474962 MROH7Q68CQ1 1323 aa13.78□□□□□ -0.2
CLIP2-204ENST00000474962 WDR19Q8NEZ3 1342 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms