RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 EVI5LQ96CN4 794 aa18.43■□□□□ 0.54
SRRT-209ENST00000474896 WDR11Q9BZH6 1224 aa18.43■□□□□ 0.54
SRRT-209ENST00000474896 GPCPD1Q9NPB8 672 aa18.43■□□□□ 0.54
SRRT-209ENST00000474896 ADD3Q9UEY8 706 aaKnown RBP18.43■□□□□ 0.54
SRRT-209ENST00000474896 ZBTB47Q9UFB7 747 aaPredicted RBP18.43■□□□□ 0.54
SRRT-209ENST00000474896 SPTBN5Q9NRC6 3674 aaKnown RBP18.42■□□□□ 0.54
SRRT-209ENST00000474896 PTPDC1A2A3K4 754 aa18.42■□□□□ 0.54
SRRT-209ENST00000474896 ALDH5A1P51649 535 aaPredicted RBP18.42■□□□□ 0.54
SRRT-209ENST00000474896 RRP12Q5JTH9 1297 aaKnown RBP18.42■□□□□ 0.54
SRRT-209ENST00000474896 SYDE2Q5VT97 1194 aa18.42■□□□□ 0.54
SRRT-209ENST00000474896 EXOC6Q8TAG9 804 aa18.42■□□□□ 0.54
SRRT-209ENST00000474896 TMEM47Q9BQJ4 181 aa18.42■□□□□ 0.54
SRRT-209ENST00000474896 WNT8AQ9H1J5 351 aa18.42■□□□□ 0.54
SRRT-209ENST00000474896 ALDH8A1Q9H2A2 487 aaPredicted RBP18.42■□□□□ 0.54
SRRT-209ENST00000474896 SLC28A3Q9HAS3 691 aa18.42■□□□□ 0.54
SRRT-209ENST00000474896 HELLSQ9NRZ9 838 aa18.42■□□□□ 0.54
SRRT-209ENST00000474896 YBX2Q9Y2T7 364 aaKnown RBP18.42■□□□□ 0.54
SRRT-209ENST00000474896 FRMPD2Q68DX3 1309 aaPredicted RBP18.42■□□□□ 0.54
SRRT-209ENST00000474896 TTC28Q96AY4 2481 aa18.42■□□□□ 0.54
SRRT-209ENST00000474896 NFIBO00712 420 aa18.41■□□□□ 0.54
SRRT-209ENST00000474896 FGAP02671 866 aa18.41■□□□□ 0.54
SRRT-209ENST00000474896 TOP1P11387 765 aaKnown RBP18.41■□□□□ 0.54
SRRT-209ENST00000474896 RABGGTBP53611 331 aa18.41■□□□□ 0.54
SRRT-209ENST00000474896 SCLYQ96I15 445 aa18.41■□□□□ 0.54
SRRT-209ENST00000474896 SLC4A7Q9Y6M7 1214 aa18.41■□□□□ 0.54
SRRT-209ENST00000474896 SALL3Q9BXA9 1300 aa18.41■□□□□ 0.54
SRRT-209ENST00000474896 MYL3P08590 195 aa18.4■□□□□ 0.54
SRRT-209ENST00000474896 CALML3P27482 149 aa18.4■□□□□ 0.54
SRRT-209ENST00000474896 ATXN2LQ8WWM7 1075 aaKnown RBP18.4■□□□□ 0.54
SRRT-209ENST00000474896 TCP11L1Q9NUJ3 509 aa18.4■□□□□ 0.54
SRRT-209ENST00000474896 TRMT13Q9NUP7 481 aaKnown RBP18.4■□□□□ 0.54
SRRT-209ENST00000474896 POLR3EQ9NVU0 708 aa18.4■□□□□ 0.54
SRRT-209ENST00000474896 LCTP09848 1927 aa18.4■□□□□ 0.54
SRRT-209ENST00000474896 LOC102724159A0A0B4J2E5 919 aa18.39■□□□□ 0.53
SRRT-209ENST00000474896 RBM47A0AV96 593 aaKnown RBP18.39■□□□□ 0.53
SRRT-209ENST00000474896 ZBBXA8MT70 800 aa18.39■□□□□ 0.53
SRRT-209ENST00000474896 TNFRSF10AO00220 468 aa18.39■□□□□ 0.53
SRRT-209ENST00000474896 SUPT20HL2P0C7V6 817 aa18.39■□□□□ 0.53
SRRT-209ENST00000474896 CYP2C9P11712 490 aa18.39■□□□□ 0.53
SRRT-209ENST00000474896 MYOGP15173 224 aa18.39■□□□□ 0.53
SRRT-209ENST00000474896 PURAQ00577 322 aaKnown RBP18.39■□□□□ 0.53
SRRT-209ENST00000474896 PWP2Q15269 919 aaKnown RBP18.39■□□□□ 0.53
SRRT-209ENST00000474896 MCMDC2Q4G0Z9 681 aa18.39■□□□□ 0.53
SRRT-209ENST00000474896 CLEC4DQ8WXI8 215 aa18.39■□□□□ 0.53
SRRT-209ENST00000474896 VWCEQ96DN2 955 aa18.39■□□□□ 0.53
SRRT-209ENST00000474896 FAM227BQ96M60 508 aa18.39■□□□□ 0.53
SRRT-209ENST00000474896 GPHNQ9NQX3 736 aaPredicted RBP18.39■□□□□ 0.53
SRRT-209ENST00000474896 LRRC37A2A6NM11 1700 aa18.39■□□□□ 0.53
SRRT-209ENST00000474896 GBF1Q92538 1859 aa18.38■□□□□ 0.53
SRRT-209ENST00000474896 CPT1AP50416 773 aa18.38■□□□□ 0.53
SRRT-209ENST00000474896 PDE1AP54750 535 aa18.38■□□□□ 0.53
SRRT-209ENST00000474896 SLC30A10Q6XR72 485 aa18.38■□□□□ 0.53
SRRT-209ENST00000474896 RNF207Q6ZRF8 634 aa18.38■□□□□ 0.53
SRRT-209ENST00000474896 OR6J1Q8NGC5 347 aa18.38■□□□□ 0.53
SRRT-209ENST00000474896 ASB2Q96Q27 587 aa18.38■□□□□ 0.53
SRRT-209ENST00000474896 MTG1Q9BT17 334 aaPredicted RBP18.38■□□□□ 0.53
SRRT-209ENST00000474896 THEGQ9P2T0 379 aa18.38■□□□□ 0.53
SRRT-209ENST00000474896 TNKSO95271 1327 aa18.38■□□□□ 0.53
SRRT-209ENST00000474896 A0A0D9SFI3 127 aa18.37■□□□□ 0.53
SRRT-209ENST00000474896 HSPD1P10809 573 aaKnown RBP18.37■□□□□ 0.53
SRRT-209ENST00000474896 PDHBP11177 359 aa18.37■□□□□ 0.53
SRRT-209ENST00000474896 ATP2A2P16615 1042 aaKnown RBP18.37■□□□□ 0.53
SRRT-209ENST00000474896 HAND2P61296 217 aa18.37■□□□□ 0.53
SRRT-209ENST00000474896 MRPS5P82675 430 aaKnown RBP18.37■□□□□ 0.53
SRRT-209ENST00000474896 PDE4DQ08499 809 aa18.37■□□□□ 0.53
SRRT-209ENST00000474896 TTLL4Q14679 1199 aa18.37■□□□□ 0.53
SRRT-209ENST00000474896 NBPF20Q3BBV1 942 aa18.37■□□□□ 0.53
SRRT-209ENST00000474896 DEFB128Q7Z7B8 93 aa18.37■□□□□ 0.53
SRRT-209ENST00000474896 PCDHA11Q9Y5I1 949 aa18.37■□□□□ 0.53
SRRT-209ENST00000474896 NEFLP07196 543 aa18.36■□□□□ 0.53
SRRT-209ENST00000474896 RPS6P62753 249 aaKnown RBP18.36■□□□□ 0.53
SRRT-209ENST00000474896 AAMPQ13685 434 aa18.36■□□□□ 0.53
SRRT-209ENST00000474896 BRDTQ58F21 947 aaPredicted RBP18.36■□□□□ 0.53
SRRT-209ENST00000474896 FAM47CQ5HY64 1035 aa18.36■□□□□ 0.53
SRRT-209ENST00000474896 PPP2R2DQ66LE6 453 aa18.36■□□□□ 0.53
SRRT-209ENST00000474896 PPP1R13LQ8WUF5 828 aa18.36■□□□□ 0.53
SRRT-209ENST00000474896 TTC14Q96N46 770 aa18.36■□□□□ 0.53
SRRT-209ENST00000474896 PNMA2Q9UL42 364 aa18.36■□□□□ 0.53
SRRT-209ENST00000474896 NKRFO15226 690 aaKnown RBP eCLIP18.35■□□□□ 0.53
SRRT-209ENST00000474896 PFKMP08237 780 aa18.35■□□□□ 0.53
SRRT-209ENST00000474896 ZNF543Q08ER8 600 aa18.35■□□□□ 0.53
SRRT-209ENST00000474896 NMIQ13287 307 aaPredicted RBP18.35■□□□□ 0.53
SRRT-209ENST00000474896 MFSD6Q6ZSS7 791 aa18.35■□□□□ 0.53
SRRT-209ENST00000474896 ZNF589Q86UQ0 364 aaPredicted RBP18.35■□□□□ 0.53
SRRT-209ENST00000474896 COPS5Q92905 334 aa18.35■□□□□ 0.53
SRRT-209ENST00000474896 MPHOSPH6Q99547 160 aaKnown RBP18.35■□□□□ 0.53
SRRT-209ENST00000474896 KPNA6O60684 536 aa18.34■□□□□ 0.53
SRRT-209ENST00000474896 TXNP10599 105 aaKnown RBP18.34■□□□□ 0.53
SRRT-209ENST00000474896 PPP2R5BQ15173 497 aa18.34■□□□□ 0.53
SRRT-209ENST00000474896 DNERQ8NFT8 737 aa18.34■□□□□ 0.53
SRRT-209ENST00000474896 SCFD2Q8WU76 684 aa18.34■□□□□ 0.53
SRRT-209ENST00000474896 RAD50Q92878 1312 aa18.33■□□□□ 0.53
SRRT-209ENST00000474896 A6NJR5 290 aa18.33■□□□□ 0.52
SRRT-209ENST00000474896 TRIM6-TRIM34B2RNG4 842 aa18.33■□□□□ 0.52
SRRT-209ENST00000474896 SNHG28P0DPA3 235 aa18.33■□□□□ 0.52
SRRT-209ENST00000474896 EDNRBP24530 442 aa18.33■□□□□ 0.52
SRRT-209ENST00000474896 TMEM67Q5HYA8 995 aa18.33■□□□□ 0.52
SRRT-209ENST00000474896 NFRKBQ6P4R8 1299 aa18.33■□□□□ 0.52
SRRT-209ENST00000474896 TICAM2Q86XR7 235 aa18.33■□□□□ 0.52
SRRT-209ENST00000474896 MICALL1Q8N3F8 863 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms