RNA–Protein interactions for RNA: ENST00000474725.5

EDEM3-206, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 2

Gene EDEM3, Length 1,911 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-206ENST00000474725 GCOM1H8Y6P7 765 aaPredicted RBP23.08■■□□□ 1.28
EDEM3-206ENST00000474725 POLR2MP0CAP2 368 aa23.08■■□□□ 1.28
EDEM3-206ENST00000474725 SNAPC2Q13487 334 aa23.08■■□□□ 1.28
EDEM3-206ENST00000474725 TMEM132BQ14DG7 1078 aa23.08■■□□□ 1.28
EDEM3-206ENST00000474725 MCTP2Q6DN12 878 aa23.08■■□□□ 1.28
EDEM3-206ENST00000474725 FASTKD5Q7L8L6 764 aaKnown RBP23.08■■□□□ 1.28
EDEM3-206ENST00000474725 MRPS27Q92552 414 aaKnown RBP23.08■■□□□ 1.28
EDEM3-206ENST00000474725 PNMA2Q9UL42 364 aa23.08■■□□□ 1.28
EDEM3-206ENST00000474725 FOSP01100 380 aaPredicted RBP23.07■■□□□ 1.28
EDEM3-206ENST00000474725 MUM1L1Q5H9M0 696 aa23.07■■□□□ 1.28
EDEM3-206ENST00000474725 SHC4Q6S5L8 630 aa23.07■■□□□ 1.28
EDEM3-206ENST00000474725 HOMER2Q9NSB8 354 aa23.07■■□□□ 1.28
EDEM3-206ENST00000474725 A0A1B0GVL5 298 aa23.06■■□□□ 1.28
EDEM3-206ENST00000474725 SPDYE3A6NKU9 549 aa23.06■■□□□ 1.28
EDEM3-206ENST00000474725 NFIBO00712 420 aa23.06■■□□□ 1.28
EDEM3-206ENST00000474725 NR1I2O75469 434 aa23.06■■□□□ 1.28
EDEM3-206ENST00000474725 CMA1P23946 247 aa23.06■■□□□ 1.28
EDEM3-206ENST00000474725 OAZ1P54368 228 aa23.06■■□□□ 1.28
EDEM3-206ENST00000474725 L1TD1Q5T7N2 865 aaKnown RBP23.06■■□□□ 1.28
EDEM3-206ENST00000474725 GPAT2Q6NUI2 795 aa23.06■■□□□ 1.28
EDEM3-206ENST00000474725 FCHSD1Q86WN1 690 aa23.06■■□□□ 1.28
EDEM3-206ENST00000474725 TEX2Q8IWB9 1127 aa23.06■■□□□ 1.28
EDEM3-206ENST00000474725 TMEM60Q9H2L4 133 aa23.06■■□□□ 1.28
EDEM3-206ENST00000474725 DACT1Q9NYF0 836 aa23.06■■□□□ 1.28
EDEM3-206ENST00000474725 ZNF214Q9UL59 606 aaPredicted RBP23.06■■□□□ 1.28
EDEM3-206ENST00000474725 RIPK3Q9Y572 518 aa23.06■■□□□ 1.28
EDEM3-206ENST00000474725 COL11A1P12107 1806 aaPredicted RBP23.06■■□□□ 1.28
EDEM3-206ENST00000474725 MKRN3Q13064 507 aaKnown RBP23.06■■□□□ 1.28
EDEM3-206ENST00000474725 POTEEQ6S8J3 1075 aa23.06■■□□□ 1.28
EDEM3-206ENST00000474725 CCDC73Q6ZRK6 1079 aa23.06■■□□□ 1.28
EDEM3-206ENST00000474725 TRERF1Q96PN7 1200 aa23.06■■□□□ 1.28
EDEM3-206ENST00000474725 ASCC2Q9H1I8 757 aaPredicted RBP23.06■■□□□ 1.28
EDEM3-206ENST00000474725 TDP2O95551 362 aa23.05■■□□□ 1.28
EDEM3-206ENST00000474725 IRX3P78415 501 aaPredicted RBP23.05■■□□□ 1.28
EDEM3-206ENST00000474725 SPECC1Q5M775 1068 aa23.05■■□□□ 1.28
EDEM3-206ENST00000474725 SNRNP48Q6IEG0 339 aaKnown RBP23.05■■□□□ 1.28
EDEM3-206ENST00000474725 SYAP1Q96A49 352 aaPredicted RBP23.05■■□□□ 1.28
EDEM3-206ENST00000474725 FERMT2Q96AC1 680 aa23.05■■□□□ 1.28
EDEM3-206ENST00000474725 ATP2A1O14983 1001 aa23.04■■□□□ 1.28
EDEM3-206ENST00000474725 NDUFA8P51970 172 aa23.04■■□□□ 1.28
EDEM3-206ENST00000474725 IL17AQ16552 155 aa23.04■■□□□ 1.28
EDEM3-206ENST00000474725 RESP18Q5W5W9 173 aa23.04■■□□□ 1.28
EDEM3-206ENST00000474725 MCF2L2Q86YR7 1114 aa23.04■■□□□ 1.28
EDEM3-206ENST00000474725 ENGASEQ8NFI3 743 aa23.04■■□□□ 1.28
EDEM3-206ENST00000474725 CSRNP2Q9H175 543 aa23.04■■□□□ 1.28
EDEM3-206ENST00000474725 TRPM7Q96QT4 1865 aa23.04■■□□□ 1.28
EDEM3-206ENST00000474725 HSD17B4P51659 736 aa23.04■■□□□ 1.28
EDEM3-206ENST00000474725 SNW1Q13573 536 aaKnown RBP23.04■■□□□ 1.28
EDEM3-206ENST00000474725 ZSCAN23Q3MJ62 389 aa23.04■■□□□ 1.28
EDEM3-206ENST00000474725 LBX2Q6XYB7 198 aa23.04■■□□□ 1.28
EDEM3-206ENST00000474725 ZNF579Q8NAF0 562 aaKnown RBP23.04■■□□□ 1.28
EDEM3-206ENST00000474725 MYH7BA7E2Y1 1941 aa23.03■■□□□ 1.28
EDEM3-206ENST00000474725 VWA3AA6NCI4 1184 aa23.03■■□□□ 1.28
EDEM3-206ENST00000474725 KIF3CO14782 793 aa23.03■■□□□ 1.28
EDEM3-206ENST00000474725 NEMFO60524 1076 aa23.03■■□□□ 1.28
EDEM3-206ENST00000474725 PFKFB1P16118 471 aa23.03■■□□□ 1.28
EDEM3-206ENST00000474725 USP11P51784 963 aa23.03■■□□□ 1.28
EDEM3-206ENST00000474725 HUNKP57058 714 aa23.03■■□□□ 1.28
EDEM3-206ENST00000474725 ARHGAP4P98171 946 aa23.03■■□□□ 1.28
EDEM3-206ENST00000474725 FAM160A1Q05DH4 1040 aa23.03■■□□□ 1.28
EDEM3-206ENST00000474725 ORC2Q13416 577 aaPredicted RBP23.03■■□□□ 1.28
EDEM3-206ENST00000474725 PLS1Q14651 629 aa23.03■■□□□ 1.28
EDEM3-206ENST00000474725 CCDC183Q5T5S1 534 aa23.03■■□□□ 1.28
EDEM3-206ENST00000474725 SPRYD7Q5W111 196 aa23.03■■□□□ 1.28
EDEM3-206ENST00000474725 ARL6IP4Q66PJ3 421 aaKnown RBP23.03■■□□□ 1.28
EDEM3-206ENST00000474725 PPP4R3AQ6IN85 833 aa23.03■■□□□ 1.28
EDEM3-206ENST00000474725 CRYGNQ8WXF5 182 aa23.03■■□□□ 1.28
EDEM3-206ENST00000474725 MS4A4AQ96JQ5 239 aa23.03■■□□□ 1.28
EDEM3-206ENST00000474725 TEX13BQ9BXU2 312 aa23.03■■□□□ 1.28
EDEM3-206ENST00000474725 RNF146Q9NTX7 359 aa23.03■■□□□ 1.28
EDEM3-206ENST00000474725 SLC37A4O43826 429 aa23.02■■□□□ 1.28
EDEM3-206ENST00000474725 PEX10O60683 326 aa23.02■■□□□ 1.28
EDEM3-206ENST00000474725 SREBF1P36956 1147 aa23.02■■□□□ 1.28
EDEM3-206ENST00000474725 STAT3P40763 770 aa23.02■■□□□ 1.28
EDEM3-206ENST00000474725 GTF2A2P52657 109 aa23.02■■□□□ 1.28
EDEM3-206ENST00000474725 PABPC4Q13310 644 aaKnown RBP eCLIP23.02■■□□□ 1.28
EDEM3-206ENST00000474725 POTEDQ86YR6 584 aa23.02■■□□□ 1.28
EDEM3-206ENST00000474725 FMR1NBQ8N0W7 255 aaPredicted RBP23.02■■□□□ 1.28
EDEM3-206ENST00000474725 BTBD7Q9P203 1132 aa23.02■■□□□ 1.28
EDEM3-206ENST00000474725 LAD1O00515 517 aa23.02■■□□□ 1.28
EDEM3-206ENST00000474725 CETPP11597 493 aa23.02■■□□□ 1.28
EDEM3-206ENST00000474725 OSBPP22059 807 aa23.02■■□□□ 1.28
EDEM3-206ENST00000474725 HERVK_113P62684 666 aa23.02■■□□□ 1.28
EDEM3-206ENST00000474725 GHRHRQ02643 423 aa23.02■■□□□ 1.28
EDEM3-206ENST00000474725 DDX19AQ9NUU7 478 aaKnown RBP23.02■■□□□ 1.28
EDEM3-206ENST00000474725 PASKQ96RG2 1323 aa23.01■■□□□ 1.27
EDEM3-206ENST00000474725 MB21D1Q8N884 522 aa23.01■■□□□ 1.27
EDEM3-206ENST00000474725 COL20A1Q9P218 1284 aa23.01■■□□□ 1.27
EDEM3-206ENST00000474725 HPSEQ9Y251 543 aa23.01■■□□□ 1.27
EDEM3-206ENST00000474725 FAM237AA0A1B0GTK4 181 aa23■■□□□ 1.27
EDEM3-206ENST00000474725 GOLGA6L3A6NEY3 463 aa23■■□□□ 1.27
EDEM3-206ENST00000474725 OR52Z1P0C646 297 aa23■■□□□ 1.27
EDEM3-206ENST00000474725 DTHD1Q6ZMT9 781 aa23■■□□□ 1.27
EDEM3-206ENST00000474725 NAP1L4Q99733 375 aaKnown RBP23■■□□□ 1.27
EDEM3-206ENST00000474725 DDX25Q9UHL0 483 aaKnown RBP23■■□□□ 1.27
EDEM3-206ENST00000474725 CYP3A7-CYP3A51PA0A087WV96 503 aa23■■□□□ 1.27
EDEM3-206ENST00000474725 CCL15-CCL14A0A0B4J2E2 113 aa23■■□□□ 1.27
EDEM3-206ENST00000474725 ZBTB48P10074 688 aaPredicted RBP23■■□□□ 1.27
EDEM3-206ENST00000474725 GCFC2P16383 781 aaKnown RBP23■■□□□ 1.27
EDEM3-206ENST00000474725 CYP3A7P24462 503 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms