RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 MICALL1Q8N3F8 863 aa16.55■□□□□ 0.24
CCDC78-209ENST00000474647 SCLYQ96I15 445 aa16.55■□□□□ 0.24
CCDC78-209ENST00000474647 VTA1Q9NP79 307 aa16.55■□□□□ 0.24
CCDC78-209ENST00000474647 IL17RBQ9NRM6 502 aa16.55■□□□□ 0.24
CCDC78-209ENST00000474647 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.55■□□□□ 0.24
CCDC78-209ENST00000474647 BDP1A6H8Y1 2624 aa16.54■□□□□ 0.24
CCDC78-209ENST00000474647 PTPDC1A2A3K4 754 aa16.54■□□□□ 0.24
CCDC78-209ENST00000474647 ICAM1P05362 532 aa16.54■□□□□ 0.24
CCDC78-209ENST00000474647 SLC16A2P36021 539 aa16.54■□□□□ 0.24
CCDC78-209ENST00000474647 PPP2R2DQ66LE6 453 aa16.54■□□□□ 0.24
CCDC78-209ENST00000474647 IL27Q8NEV9 243 aa16.54■□□□□ 0.24
CCDC78-209ENST00000474647 ATXN2LQ8WWM7 1075 aaKnown RBP16.54■□□□□ 0.24
CCDC78-209ENST00000474647 YTHDC1Q96MU7 727 aaKnown RBP16.54■□□□□ 0.24
CCDC78-209ENST00000474647 SLC4A7Q9Y6M7 1214 aa16.54■□□□□ 0.24
CCDC78-209ENST00000474647 PRRC2BQ5JSZ5 2229 aaKnown RBP16.53■□□□□ 0.24
CCDC78-209ENST00000474647 FRMPD2Q68DX3 1309 aaPredicted RBP16.53■□□□□ 0.24
CCDC78-209ENST00000474647 FOXP2O15409 715 aa16.53■□□□□ 0.24
CCDC78-209ENST00000474647 MYL3P08590 195 aa16.53■□□□□ 0.24
CCDC78-209ENST00000474647 MX1P20591 662 aa16.53■□□□□ 0.24
CCDC78-209ENST00000474647 ALDH5A1P51649 535 aaPredicted RBP16.53■□□□□ 0.24
CCDC78-209ENST00000474647 RRP12Q5JTH9 1297 aaKnown RBP16.53■□□□□ 0.24
CCDC78-209ENST00000474647 RPUSD2Q8IZ73 545 aaKnown RBP16.53■□□□□ 0.24
CCDC78-209ENST00000474647 DCAF4Q8WV16 495 aa16.53■□□□□ 0.24
CCDC78-209ENST00000474647 ASB2Q96Q27 587 aa16.53■□□□□ 0.24
CCDC78-209ENST00000474647 SEZ6LQ9BYH1 1024 aa16.53■□□□□ 0.24
CCDC78-209ENST00000474647 ALDH8A1Q9H2A2 487 aaPredicted RBP16.53■□□□□ 0.24
CCDC78-209ENST00000474647 ADD3Q9UEY8 706 aaKnown RBP16.53■□□□□ 0.24
CCDC78-209ENST00000474647 Q9Y3F1 56 aa16.53■□□□□ 0.24
CCDC78-209ENST00000474647 NFIBO00712 420 aa16.52■□□□□ 0.24
CCDC78-209ENST00000474647 MYOGP15173 224 aa16.52■□□□□ 0.24
CCDC78-209ENST00000474647 BAATQ14032 418 aaPredicted RBP16.52■□□□□ 0.24
CCDC78-209ENST00000474647 FAM47CQ5HY64 1035 aa16.52■□□□□ 0.24
CCDC78-209ENST00000474647 VPS53Q5VIR6 699 aa16.52■□□□□ 0.24
CCDC78-209ENST00000474647 TTBK2Q6IQ55 1244 aa16.52■□□□□ 0.24
CCDC78-209ENST00000474647 DEFB128Q7Z7B8 93 aa16.52■□□□□ 0.24
CCDC78-209ENST00000474647 ADAMTS19Q8TE59 1207 aa16.52■□□□□ 0.24
CCDC78-209ENST00000474647 RANBP17Q9H2T7 1088 aaKnown RBP16.52■□□□□ 0.24
CCDC78-209ENST00000474647 TRMT13Q9NUP7 481 aaKnown RBP16.52■□□□□ 0.24
CCDC78-209ENST00000474647 TNKSO95271 1327 aa16.51■□□□□ 0.23
CCDC78-209ENST00000474647 CYP2C9P11712 490 aa16.51■□□□□ 0.23
CCDC78-209ENST00000474647 CALML3P27482 149 aa16.51■□□□□ 0.23
CCDC78-209ENST00000474647 CPT1AP50416 773 aa16.51■□□□□ 0.23
CCDC78-209ENST00000474647 MRPS5P82675 430 aaKnown RBP16.51■□□□□ 0.23
CCDC78-209ENST00000474647 DUSP28Q4G0W2 176 aa16.51■□□□□ 0.23
CCDC78-209ENST00000474647 SYDE2Q5VT97 1194 aa16.51■□□□□ 0.23
CCDC78-209ENST00000474647 SLC30A10Q6XR72 485 aa16.51■□□□□ 0.23
CCDC78-209ENST00000474647 OR6J1Q8NGC5 347 aa16.51■□□□□ 0.23
CCDC78-209ENST00000474647 WDR11Q9BZH6 1224 aa16.51■□□□□ 0.23
CCDC78-209ENST00000474647 GPCPD1Q9NPB8 672 aa16.51■□□□□ 0.23
CCDC78-209ENST00000474647 GPHNQ9NQX3 736 aaPredicted RBP16.51■□□□□ 0.23
CCDC78-209ENST00000474647 POLR3EQ9NVU0 708 aa16.51■□□□□ 0.23
CCDC78-209ENST00000474647 ZBTB47Q9UFB7 747 aaPredicted RBP16.51■□□□□ 0.23
CCDC78-209ENST00000474647 SIP14410 1827 aa16.51■□□□□ 0.23
CCDC78-209ENST00000474647 ATP2A2P16615 1042 aaKnown RBP16.5■□□□□ 0.23
CCDC78-209ENST00000474647 COL9A1P20849 921 aa16.5■□□□□ 0.23
CCDC78-209ENST00000474647 PURAQ00577 322 aaKnown RBP16.5■□□□□ 0.23
CCDC78-209ENST00000474647 TTLL4Q14679 1199 aa16.5■□□□□ 0.23
CCDC78-209ENST00000474647 MORC4Q8TE76 937 aa16.5■□□□□ 0.23
CCDC78-209ENST00000474647 PPP1R13LQ8WUF5 828 aa16.5■□□□□ 0.23
CCDC78-209ENST00000474647 UHRF1Q96T88 793 aaPredicted RBP16.5■□□□□ 0.23
CCDC78-209ENST00000474647 TSPYL2Q9H2G4 693 aaPredicted RBP16.5■□□□□ 0.23
CCDC78-209ENST00000474647 PCDHB15Q9Y5E8 787 aa16.5■□□□□ 0.23
CCDC78-209ENST00000474647 PCDHA11Q9Y5I1 949 aa16.5■□□□□ 0.23
CCDC78-209ENST00000474647 RAD50Q92878 1312 aa16.49■□□□□ 0.23
CCDC78-209ENST00000474647 ORC4O43929 436 aa16.49■□□□□ 0.23
CCDC78-209ENST00000474647 SUPT20HL2P0C7V6 817 aa16.49■□□□□ 0.23
CCDC78-209ENST00000474647 CHMP4BP1P59074 171 aa16.49■□□□□ 0.23
CCDC78-209ENST00000474647 PDE4DQ08499 809 aa16.49■□□□□ 0.23
CCDC78-209ENST00000474647 PPP2R5BQ15173 497 aa16.49■□□□□ 0.23
CCDC78-209ENST00000474647 SKIV2LQ15477 1246 aaKnown RBP16.49■□□□□ 0.23
CCDC78-209ENST00000474647 ANAPC4Q9UJX5 808 aa16.49■□□□□ 0.23
CCDC78-209ENST00000474647 PFKMP08237 780 aa16.48■□□□□ 0.23
CCDC78-209ENST00000474647 TOP1P11387 765 aaKnown RBP16.48■□□□□ 0.23
CCDC78-209ENST00000474647 BRDTQ58F21 947 aaPredicted RBP16.48■□□□□ 0.23
CCDC78-209ENST00000474647 BTNL9Q6UXG8 535 aa16.48■□□□□ 0.23
CCDC78-209ENST00000474647 RNF207Q6ZRF8 634 aa16.48■□□□□ 0.23
CCDC78-209ENST00000474647 MPHOSPH6Q99547 160 aaKnown RBP16.48■□□□□ 0.23
CCDC78-209ENST00000474647 TMEM47Q9BQJ4 181 aa16.48■□□□□ 0.23
CCDC78-209ENST00000474647 MTG1Q9BT17 334 aaPredicted RBP16.48■□□□□ 0.23
CCDC78-209ENST00000474647 CERS4Q9HA82 394 aa16.48■□□□□ 0.23
CCDC78-209ENST00000474647 DOCK5Q9H7D0 1870 aa16.48■□□□□ 0.23
CCDC78-209ENST00000474647 MICAL3Q7RTP6 2002 aa16.47■□□□□ 0.23
CCDC78-209ENST00000474647 CA3P07451 260 aa16.47■□□□□ 0.23
CCDC78-209ENST00000474647 ACTN1P12814 892 aa16.47■□□□□ 0.23
CCDC78-209ENST00000474647 NBPF20Q3BBV1 942 aa16.47■□□□□ 0.23
CCDC78-209ENST00000474647 TMEM67Q5HYA8 995 aa16.47■□□□□ 0.23
CCDC78-209ENST00000474647 EVI5LQ96CN4 794 aa16.47■□□□□ 0.23
CCDC78-209ENST00000474647 VWCEQ96DN2 955 aa16.47■□□□□ 0.23
CCDC78-209ENST00000474647 NLRC5Q86WI3 1866 aa16.47■□□□□ 0.23
CCDC78-209ENST00000474647 SALL3Q9BXA9 1300 aa16.46■□□□□ 0.23
CCDC78-209ENST00000474647 LOC102724159A0A0B4J2E5 919 aa16.46■□□□□ 0.23
CCDC78-209ENST00000474647 RBM47A0AV96 593 aaKnown RBP16.46■□□□□ 0.23
CCDC78-209ENST00000474647 RFXAPO00287 272 aa16.46■□□□□ 0.23
CCDC78-209ENST00000474647 PDHBP11177 359 aa16.46■□□□□ 0.23
CCDC78-209ENST00000474647 NOVP48745 357 aa16.46■□□□□ 0.23
CCDC78-209ENST00000474647 HAND2P61296 217 aa16.46■□□□□ 0.23
CCDC78-209ENST00000474647 TFF2Q03403 129 aa16.46■□□□□ 0.23
CCDC78-209ENST00000474647 PWP2Q15269 919 aaKnown RBP16.46■□□□□ 0.23
CCDC78-209ENST00000474647 USH1GQ495M9 461 aa16.46■□□□□ 0.23
CCDC78-209ENST00000474647 CLEC4DQ8WXI8 215 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms