RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 C6orf222P0C671 652 aaPredicted RBP18.58■□□□□ 0.56
ITGB1-210ENST00000474568 TNFAIP2Q03169 654 aa18.58■□□□□ 0.56
ITGB1-210ENST00000474568 TMEM63BQ5T3F8 832 aa18.58■□□□□ 0.56
ITGB1-210ENST00000474568 CHRDL2Q6WN34 429 aa18.58■□□□□ 0.56
ITGB1-210ENST00000474568 MICU3Q86XE3 530 aa18.58■□□□□ 0.56
ITGB1-210ENST00000474568 TMTC2Q8N394 836 aa18.58■□□□□ 0.56
ITGB1-210ENST00000474568 SYTL5Q8TDW5 730 aaPredicted RBP18.58■□□□□ 0.56
ITGB1-210ENST00000474568 TAAR1Q96RJ0 339 aa18.58■□□□□ 0.56
ITGB1-210ENST00000474568 MTA3Q9BTC8 594 aa18.58■□□□□ 0.56
ITGB1-210ENST00000474568 RIOX1Q9H6W3 641 aa18.58■□□□□ 0.56
ITGB1-210ENST00000474568 COL20A1Q9P218 1284 aa18.58■□□□□ 0.56
ITGB1-210ENST00000474568 PCDHA1Q9Y5I3 950 aa18.58■□□□□ 0.56
ITGB1-210ENST00000474568 SLC12A7Q9Y666 1083 aa18.58■□□□□ 0.56
ITGB1-210ENST00000474568 REC8O95072 547 aa18.57■□□□□ 0.56
ITGB1-210ENST00000474568 KIF5BP33176 963 aa18.57■□□□□ 0.56
ITGB1-210ENST00000474568 LIFRP42702 1097 aa18.57■□□□□ 0.56
ITGB1-210ENST00000474568 PDE4DQ08499 809 aa18.57■□□□□ 0.56
ITGB1-210ENST00000474568 KRT32Q14532 448 aa18.57■□□□□ 0.56
ITGB1-210ENST00000474568 TAPT1Q6NXT6 567 aa18.57■□□□□ 0.56
ITGB1-210ENST00000474568 DHX32Q7L7V1 743 aaKnown RBP18.57■□□□□ 0.56
ITGB1-210ENST00000474568 MCF2L2Q86YR7 1114 aa18.57■□□□□ 0.56
ITGB1-210ENST00000474568 JAKMIP1Q96N16 626 aaKnown RBP18.57■□□□□ 0.56
ITGB1-210ENST00000474568 COLQQ9Y215 455 aaPredicted RBP18.57■□□□□ 0.56
ITGB1-210ENST00000474568 ATP11BQ9Y2G3 1177 aa18.57■□□□□ 0.56
ITGB1-210ENST00000474568 SNX14Q9Y5W7 946 aa18.57■□□□□ 0.56
ITGB1-210ENST00000474568 OPLAHO14841 1288 aa18.56■□□□□ 0.56
ITGB1-210ENST00000474568 SMPD1P17405 629 aa18.56■□□□□ 0.56
ITGB1-210ENST00000474568 HSPA4P34932 840 aa18.56■□□□□ 0.56
ITGB1-210ENST00000474568 RTP1P59025 263 aa18.56■□□□□ 0.56
ITGB1-210ENST00000474568 BEX3Q00994 111 aa18.56■□□□□ 0.56
ITGB1-210ENST00000474568 EXOSC10Q01780 885 aaKnown RBP18.56■□□□□ 0.56
ITGB1-210ENST00000474568 TSGA10IPQ3SY00 556 aa18.56■□□□□ 0.56
ITGB1-210ENST00000474568 CCDC82Q8N4S0 544 aa18.56■□□□□ 0.56
ITGB1-210ENST00000474568 RGS22Q8NE09 1264 aa18.56■□□□□ 0.56
ITGB1-210ENST00000474568 MORC4Q8TE76 937 aa18.56■□□□□ 0.56
ITGB1-210ENST00000474568 SPC25Q9HBM1 224 aa18.56■□□□□ 0.56
ITGB1-210ENST00000474568 VTA1Q9NP79 307 aa18.56■□□□□ 0.56
ITGB1-210ENST00000474568 NAP1L2Q9ULW6 460 aaPredicted RBP18.56■□□□□ 0.56
ITGB1-210ENST00000474568 PHF24Q9UPV7 400 aa18.56■□□□□ 0.56
ITGB1-210ENST00000474568 MCM3APO60318 1980 aa18.55■□□□□ 0.56
ITGB1-210ENST00000474568 PNMA6FA0A0J9YX94 578 aa18.55■□□□□ 0.56
ITGB1-210ENST00000474568 hCG_1642624A0A1W2PR95 340 aa18.55■□□□□ 0.56
ITGB1-210ENST00000474568 DYNC1LI2O43237 492 aaPredicted RBP18.55■□□□□ 0.56
ITGB1-210ENST00000474568 HOXA13P31271 388 aaPredicted RBP18.55■□□□□ 0.56
ITGB1-210ENST00000474568 KCNA10Q16322 511 aa18.55■□□□□ 0.56
ITGB1-210ENST00000474568 SLC39A5Q6ZMH5 540 aa18.55■□□□□ 0.56
ITGB1-210ENST00000474568 SYNE3Q6ZMZ3 975 aa18.55■□□□□ 0.56
ITGB1-210ENST00000474568 SRBD1Q8N5C6 995 aaKnown RBP18.55■□□□□ 0.56
ITGB1-210ENST00000474568 MAP3K14Q99558 947 aa18.55■□□□□ 0.56
ITGB1-210ENST00000474568 BRPF3Q9ULD4 1205 aa18.55■□□□□ 0.56
ITGB1-210ENST00000474568 A0A1W2PQ45 241 aaPredicted RBP18.54■□□□□ 0.56
ITGB1-210ENST00000474568 A0A1W2PQY0 241 aa18.54■□□□□ 0.56
ITGB1-210ENST00000474568 CALM1P0DP23 149 aa18.54■□□□□ 0.56
ITGB1-210ENST00000474568 CALM2P0DP24 149 aa18.54■□□□□ 0.56
ITGB1-210ENST00000474568 CALM3P0DP25 149 aa18.54■□□□□ 0.56
ITGB1-210ENST00000474568 EIF2AK2P19525 551 aaKnown RBP18.54■□□□□ 0.56
ITGB1-210ENST00000474568 ACLYP53396 1101 aa18.54■□□□□ 0.56
ITGB1-210ENST00000474568 GJA9P57773 515 aa18.54■□□□□ 0.56
ITGB1-210ENST00000474568 FGD1P98174 961 aa18.54■□□□□ 0.56
ITGB1-210ENST00000474568 TRIM60Q495X7 471 aa18.54■□□□□ 0.56
ITGB1-210ENST00000474568 GNASQ5JWF2 1037 aa18.54■□□□□ 0.56
ITGB1-210ENST00000474568 TLK2Q86UE8 772 aa18.54■□□□□ 0.56
ITGB1-210ENST00000474568 KLHDC9Q8NEP7 349 aa18.54■□□□□ 0.56
ITGB1-210ENST00000474568 DNERQ8NFT8 737 aa18.54■□□□□ 0.56
ITGB1-210ENST00000474568 KCNB2Q92953 911 aa18.54■□□□□ 0.56
ITGB1-210ENST00000474568 RRP36Q96EU6 259 aaKnown RBP18.54■□□□□ 0.56
ITGB1-210ENST00000474568 RMDN3Q96TC7 470 aa18.54■□□□□ 0.56
ITGB1-210ENST00000474568 MPHOSPH6Q99547 160 aaKnown RBP18.54■□□□□ 0.56
ITGB1-210ENST00000474568 LCTP09848 1927 aa18.54■□□□□ 0.56
ITGB1-210ENST00000474568 ALPK3Q96L96 1907 aa18.53■□□□□ 0.56
ITGB1-210ENST00000474568 KLF18A0A0U1RQI7 1052 aa18.53■□□□□ 0.56
ITGB1-210ENST00000474568 EDNRBP24530 442 aa18.53■□□□□ 0.56
ITGB1-210ENST00000474568 GNAQP50148 359 aa18.53■□□□□ 0.56
ITGB1-210ENST00000474568 ARHGEF16Q5VV41 709 aa18.53■□□□□ 0.56
ITGB1-210ENST00000474568 IQSEC1Q6DN90 963 aa18.53■□□□□ 0.56
ITGB1-210ENST00000474568 APOA5Q6Q788 366 aa18.53■□□□□ 0.56
ITGB1-210ENST00000474568 SGMS1Q86VZ5 419 aa18.53■□□□□ 0.56
ITGB1-210ENST00000474568 FANCBQ8NB91 859 aa18.53■□□□□ 0.56
ITGB1-210ENST00000474568 LZTS2Q9BRK4 669 aa18.53■□□□□ 0.56
ITGB1-210ENST00000474568 SPZ1Q9BXG8 430 aa18.53■□□□□ 0.56
ITGB1-210ENST00000474568 WDR11Q9BZH6 1224 aa18.53■□□□□ 0.56
ITGB1-210ENST00000474568 AP5M1Q9H0R1 490 aa18.53■□□□□ 0.56
ITGB1-210ENST00000474568 UPF3AQ9H1J1 476 aaKnown RBP18.53■□□□□ 0.56
ITGB1-210ENST00000474568 SEC63Q9UGP8 760 aaKnown RBP18.53■□□□□ 0.56
ITGB1-210ENST00000474568 GNEQ9Y223 722 aaKnown RBP18.53■□□□□ 0.56
ITGB1-210ENST00000474568 CTAGE5O15320 804 aa18.52■□□□□ 0.56
ITGB1-210ENST00000474568 ASGR1P07306 291 aa18.52■□□□□ 0.56
ITGB1-210ENST00000474568 HMGB1P09429 215 aaKnown RBP18.52■□□□□ 0.56
ITGB1-210ENST00000474568 CCSAPQ6IQ19 270 aaPredicted RBP18.52■□□□□ 0.56
ITGB1-210ENST00000474568 BLOC1S2Q6QNY1 142 aa18.52■□□□□ 0.56
ITGB1-210ENST00000474568 Q6ZUG5 572 aa18.52■□□□□ 0.56
ITGB1-210ENST00000474568 TMTC3Q6ZXV5 915 aa18.52■□□□□ 0.56
ITGB1-210ENST00000474568 FCHSD1Q86WN1 690 aa18.52■□□□□ 0.56
ITGB1-210ENST00000474568 NSUN6Q8TEA1 469 aaKnown RBP18.52■□□□□ 0.56
ITGB1-210ENST00000474568 VTI1AQ96AJ9 217 aa18.52■□□□□ 0.56
ITGB1-210ENST00000474568 TSEN34Q9BSV6 310 aaKnown RBP18.52■□□□□ 0.56
ITGB1-210ENST00000474568 PRDM5Q9NQX1 630 aaPredicted RBP18.52■□□□□ 0.56
ITGB1-210ENST00000474568 STARD7Q9NQZ5 370 aa18.52■□□□□ 0.56
ITGB1-210ENST00000474568 LOC102724159A0A0B4J2E5 919 aa18.51■□□□□ 0.55
ITGB1-210ENST00000474568 GOLGA8AA7E2F4 631 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms