RNA–Protein interactions for RNA: ENST00000474475.1

TNFRSF9-202, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-202ENST00000474475 SLC16A2P36021 539 aa10.35□□□□□ -0.75
TNFRSF9-202ENST00000474475 SHHQ15465 462 aa10.35□□□□□ -0.75
TNFRSF9-202ENST00000474475 KCNA10Q16322 511 aa10.35□□□□□ -0.75
TNFRSF9-202ENST00000474475 BTNL9Q6UXG8 535 aa10.35□□□□□ -0.75
TNFRSF9-202ENST00000474475 UPF3AQ9H1J1 476 aaKnown RBP10.35□□□□□ -0.75
TNFRSF9-202ENST00000474475 RANBP17Q9H2T7 1088 aaKnown RBP10.35□□□□□ -0.75
TNFRSF9-202ENST00000474475 STARD7Q9NQZ5 370 aa10.35□□□□□ -0.75
TNFRSF9-202ENST00000474475 TCP11L1Q9NUJ3 509 aa10.35□□□□□ -0.75
TNFRSF9-202ENST00000474475 MTMR10Q9NXD2 777 aa10.35□□□□□ -0.75
TNFRSF9-202ENST00000474475 CCPG1Q9ULG6 757 aa10.35□□□□□ -0.75
TNFRSF9-202ENST00000474475 DDX49Q9Y6V7 483 aaKnown RBP10.35□□□□□ -0.75
TNFRSF9-202ENST00000474475 FRMPD2Q68DX3 1309 aaPredicted RBP10.34□□□□□ -0.75
TNFRSF9-202ENST00000474475 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.34□□□□□ -0.75
TNFRSF9-202ENST00000474475 GRXCR2A6NFK2 248 aa10.34□□□□□ -0.75
TNFRSF9-202ENST00000474475 MOXD2PA6NHM9 499 aa10.34□□□□□ -0.75
TNFRSF9-202ENST00000474475 KIAA0355O15063 1070 aa10.34□□□□□ -0.75
TNFRSF9-202ENST00000474475 ICAM1P05362 532 aa10.34□□□□□ -0.75
TNFRSF9-202ENST00000474475 ASGR1P07306 291 aa10.34□□□□□ -0.75
TNFRSF9-202ENST00000474475 C6orf222P0C671 652 aaPredicted RBP10.34□□□□□ -0.75
TNFRSF9-202ENST00000474475 GJA9P57773 515 aa10.34□□□□□ -0.75
TNFRSF9-202ENST00000474475 FAAP100Q0VG06 881 aa10.34□□□□□ -0.75
TNFRSF9-202ENST00000474475 AKNAD1Q5T1N1 836 aa10.34□□□□□ -0.75
TNFRSF9-202ENST00000474475 MFSD6Q6ZSS7 791 aa10.34□□□□□ -0.75
TNFRSF9-202ENST00000474475 ANKRD33Q7Z3H0 272 aa10.34□□□□□ -0.75
TNFRSF9-202ENST00000474475 NUP133Q8WUM0 1156 aa10.34□□□□□ -0.75
TNFRSF9-202ENST00000474475 PURBQ96QR8 312 aaKnown RBP10.34□□□□□ -0.75
TNFRSF9-202ENST00000474475 GPCPD1Q9NPB8 672 aa10.34□□□□□ -0.75
TNFRSF9-202ENST00000474475 CYP39A1Q9NYL5 469 aa10.34□□□□□ -0.75
TNFRSF9-202ENST00000474475 LAMA4Q16363 1823 aa10.34□□□□□ -0.75
TNFRSF9-202ENST00000474475 NEDD4P46934 1319 aa10.33□□□□□ -0.76
TNFRSF9-202ENST00000474475 ASB14A6NK59 587 aa10.33□□□□□ -0.76
TNFRSF9-202ENST00000474475 NUDT7P0C024 238 aa10.33□□□□□ -0.76
TNFRSF9-202ENST00000474475 PDHBP11177 359 aa10.33□□□□□ -0.76
TNFRSF9-202ENST00000474475 PCP11498 1178 aaKnown RBP10.33□□□□□ -0.76
TNFRSF9-202ENST00000474475 PTGS1P23219 599 aa10.33□□□□□ -0.76
TNFRSF9-202ENST00000474475 MLLT3P42568 568 aaPredicted RBP10.33□□□□□ -0.76
TNFRSF9-202ENST00000474475 CDK7P50613 346 aa10.33□□□□□ -0.76
TNFRSF9-202ENST00000474475 EPHB4P54760 987 aa10.33□□□□□ -0.76
TNFRSF9-202ENST00000474475 NKX3-2P78367 333 aa10.33□□□□□ -0.76
TNFRSF9-202ENST00000474475 TNFAIP2Q03169 654 aa10.33□□□□□ -0.76
TNFRSF9-202ENST00000474475 GNASQ5JWF2 1037 aa10.33□□□□□ -0.76
TNFRSF9-202ENST00000474475 SYDE2Q5VT97 1194 aa10.33□□□□□ -0.76
TNFRSF9-202ENST00000474475 CWC27Q6UX04 472 aaKnown RBP10.33□□□□□ -0.76
TNFRSF9-202ENST00000474475 NSMFQ6X4W1 530 aa10.33□□□□□ -0.76
TNFRSF9-202ENST00000474475 PCSK9Q8NBP7 692 aaKnown RBP10.33□□□□□ -0.76
TNFRSF9-202ENST00000474475 GLT1D1Q96MS3 346 aa10.33□□□□□ -0.76
TNFRSF9-202ENST00000474475 TTC14Q96N46 770 aa10.33□□□□□ -0.76
TNFRSF9-202ENST00000474475 TOX2Q96NM4 488 aa10.33□□□□□ -0.76
TNFRSF9-202ENST00000474475 ZKSCAN3Q9BRR0 538 aa10.33□□□□□ -0.76
TNFRSF9-202ENST00000474475 ELP1O95163 1332 aa10.33□□□□□ -0.76
TNFRSF9-202ENST00000474475 DCDC2CA8MYV0 355 aa10.32□□□□□ -0.76
TNFRSF9-202ENST00000474475 NFIBO00712 420 aa10.32□□□□□ -0.76
TNFRSF9-202ENST00000474475 ZNF213O14771 459 aa10.32□□□□□ -0.76
TNFRSF9-202ENST00000474475 SNHG28P0DPA3 235 aa10.32□□□□□ -0.76
TNFRSF9-202ENST00000474475 RAG1P15918 1043 aa10.32□□□□□ -0.76
TNFRSF9-202ENST00000474475 MFAP1P55081 439 aaKnown RBP10.32□□□□□ -0.76
TNFRSF9-202ENST00000474475 BEX3Q00994 111 aa10.32□□□□□ -0.76
TNFRSF9-202ENST00000474475 ZNF543Q08ER8 600 aa10.32□□□□□ -0.76
TNFRSF9-202ENST00000474475 BAATQ14032 418 aaPredicted RBP10.32□□□□□ -0.76
TNFRSF9-202ENST00000474475 TMEM63BQ5T3F8 832 aa10.32□□□□□ -0.76
TNFRSF9-202ENST00000474475 FAM109BQ6ICB4 259 aaPredicted RBP10.32□□□□□ -0.76
TNFRSF9-202ENST00000474475 TAPT1Q6NXT6 567 aa10.32□□□□□ -0.76
TNFRSF9-202ENST00000474475 EEPD1Q7L9B9 569 aa10.32□□□□□ -0.76
TNFRSF9-202ENST00000474475 FBXO16Q8IX29 292 aaPredicted RBP10.32□□□□□ -0.76
TNFRSF9-202ENST00000474475 MORC4Q8TE76 937 aa10.32□□□□□ -0.76
TNFRSF9-202ENST00000474475 DDX12PQ92771 950 aa10.32□□□□□ -0.76
TNFRSF9-202ENST00000474475 RNF41Q9H4P4 317 aaPredicted RBP10.32□□□□□ -0.76
TNFRSF9-202ENST00000474475 SPC25Q9HBM1 224 aa10.32□□□□□ -0.76
TNFRSF9-202ENST00000474475 PDGFCQ9NRA1 345 aa10.32□□□□□ -0.76
TNFRSF9-202ENST00000474475 DIAPH3Q9NSV4 1193 aa10.32□□□□□ -0.76
TNFRSF9-202ENST00000474475 TMEM39AQ9NV64 488 aa10.32□□□□□ -0.76
TNFRSF9-202ENST00000474475 TBX21Q9UL17 535 aa10.32□□□□□ -0.76
TNFRSF9-202ENST00000474475 GNEQ9Y223 722 aaKnown RBP10.32□□□□□ -0.76
TNFRSF9-202ENST00000474475 STXBP5LQ9Y2K9 1186 aa10.32□□□□□ -0.76
TNFRSF9-202ENST00000474475 LAMA3Q16787 3333 aa10.31□□□□□ -0.76
TNFRSF9-202ENST00000474475 GOLGA8HP0CJ92 632 aa10.31□□□□□ -0.76
TNFRSF9-202ENST00000474475 SMPD1P17405 629 aa10.31□□□□□ -0.76
TNFRSF9-202ENST00000474475 FPGSQ05932 587 aa10.31□□□□□ -0.76
TNFRSF9-202ENST00000474475 SLC30A10Q6XR72 485 aa10.31□□□□□ -0.76
TNFRSF9-202ENST00000474475 NOL8Q76FK4 1167 aaKnown RBP10.31□□□□□ -0.76
TNFRSF9-202ENST00000474475 TLK2Q86UE8 772 aa10.31□□□□□ -0.76
TNFRSF9-202ENST00000474475 DGKHQ86XP1 1220 aa10.31□□□□□ -0.76
TNFRSF9-202ENST00000474475 CLEC4DQ8WXI8 215 aa10.31□□□□□ -0.76
TNFRSF9-202ENST00000474475 ESR2Q92731 530 aa10.31□□□□□ -0.76
TNFRSF9-202ENST00000474475 FAM161BQ96MY7 647 aa10.31□□□□□ -0.76
TNFRSF9-202ENST00000474475 GUCD1Q96NT3 240 aa10.31□□□□□ -0.76
TNFRSF9-202ENST00000474475 IL25Q9H293 177 aa10.31□□□□□ -0.76
TNFRSF9-202ENST00000474475 A0A0U1RQG5 324 aaPredicted RBP10.3□□□□□ -0.76
TNFRSF9-202ENST00000474475 B4E1Z4 1266 aa10.3□□□□□ -0.76
TNFRSF9-202ENST00000474475 ARVCFO00192 962 aa10.3□□□□□ -0.76
TNFRSF9-202ENST00000474475 HIP1O00291 1037 aa10.3□□□□□ -0.76
TNFRSF9-202ENST00000474475 DYNC1LI2O43237 492 aaPredicted RBP10.3□□□□□ -0.76
TNFRSF9-202ENST00000474475 KDM4AO75164 1064 aa10.3□□□□□ -0.76
TNFRSF9-202ENST00000474475 TIMP1P01033 207 aa10.3□□□□□ -0.76
TNFRSF9-202ENST00000474475 HOXB1P14653 301 aaPredicted RBP10.3□□□□□ -0.76
TNFRSF9-202ENST00000474475 ALDH5A1P51649 535 aaPredicted RBP10.3□□□□□ -0.76
TNFRSF9-202ENST00000474475 IQSEC1Q6DN90 963 aa10.3□□□□□ -0.76
TNFRSF9-202ENST00000474475 CXCL17Q6UXB2 119 aa10.3□□□□□ -0.76
TNFRSF9-202ENST00000474475 FAM126BQ8IXS8 530 aa10.3□□□□□ -0.76
TNFRSF9-202ENST00000474475 VTI1AQ96AJ9 217 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms