RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, human

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM50B-208	ENST00000474272	UBXN11	Q5T124	520 aa		6.12	□□□□□ -1.43
TMEM50B-208	ENST00000474272	CPNE8	Q86YQ8	564 aa		6.12	□□□□□ -1.43
TMEM50B-208	ENST00000474272	TAB3	Q8N5C8	712 aa	Predicted RBP	6.12	□□□□□ -1.43
TMEM50B-208	ENST00000474272	USP40	Q9NVE5	1235 aa		6.12	□□□□□ -1.43
TMEM50B-208	ENST00000474272	DUSP10	Q9Y6W6	482 aa		6.12	□□□□□ -1.43
TMEM50B-208	ENST00000474272	GLI4	P10075	376 aa		6.11	□□□□□ -1.43
TMEM50B-208	ENST00000474272	NCAM1	P13591	858 aa		6.11	□□□□□ -1.43
TMEM50B-208	ENST00000474272	INSRR	P14616	1297 aa		6.11	□□□□□ -1.43
TMEM50B-208	ENST00000474272	ZNF16	P17020	682 aa	Predicted RBP	6.11	□□□□□ -1.43
TMEM50B-208	ENST00000474272	PML	P29590	882 aa		6.11	□□□□□ -1.43
TMEM50B-208	ENST00000474272	HTRA3	P83110	453 aa		6.11	□□□□□ -1.43
TMEM50B-208	ENST00000474272	FANCC	Q00597	558 aa		6.11	□□□□□ -1.43
TMEM50B-208	ENST00000474272	DLX2	Q07687	328 aa	Predicted RBP	6.11	□□□□□ -1.43
TMEM50B-208	ENST00000474272	TCEAL1	Q15170	157 aa		6.11	□□□□□ -1.43
TMEM50B-208	ENST00000474272	SAPCD2	Q86UD0	394 aa		6.11	□□□□□ -1.43
TMEM50B-208	ENST00000474272	FGD4	Q96M96	766 aa		6.11	□□□□□ -1.43
TMEM50B-208	ENST00000474272	NOX5	Q96PH1	765 aa		6.11	□□□□□ -1.43
TMEM50B-208	ENST00000474272	EFEMP1	Q12805	493 aa		6.1	□□□□□ -1.43
TMEM50B-208	ENST00000474272	GNPTAB	Q3T906	1256 aa		6.1	□□□□□ -1.43
TMEM50B-208	ENST00000474272	ADAT2	Q7Z6V5	191 aa	Known RBP	6.1	□□□□□ -1.43
TMEM50B-208	ENST00000474272	RBBP8NL	Q8NC74	664 aa	Predicted RBP	6.1	□□□□□ -1.43
TMEM50B-208	ENST00000474272	NLGN2	Q8NFZ4	835 aa		6.1	□□□□□ -1.43
TMEM50B-208	ENST00000474272	HAUS7	Q99871	368 aa		6.1	□□□□□ -1.43
TMEM50B-208	ENST00000474272	SYT3	Q9BQG1	590 aa		6.1	□□□□□ -1.43
TMEM50B-208	ENST00000474272	GULP1	Q9UBP9	304 aa		6.1	□□□□□ -1.43
TMEM50B-208	ENST00000474272	AURKA	O14965	403 aa		6.09	□□□□□ -1.43
TMEM50B-208	ENST00000474272	CORO7	P57737	925 aa		6.09	□□□□□ -1.43
TMEM50B-208	ENST00000474272	CAP1	Q01518	475 aa		6.09	□□□□□ -1.43
TMEM50B-208	ENST00000474272	SPATS1	Q496A3	300 aa		6.09	□□□□□ -1.43
TMEM50B-208	ENST00000474272	HHIPL2	Q6UWX4	724 aa		6.09	□□□□□ -1.43
TMEM50B-208	ENST00000474272	SMARCC2	Q8TAQ2	1214 aa		6.09	□□□□□ -1.43
TMEM50B-208	ENST00000474272	GINM1	Q9NU53	330 aa		6.09	□□□□□ -1.43
TMEM50B-208	ENST00000474272	DIS3	Q9Y2L1	958 aa	Known RBP	6.09	□□□□□ -1.43
TMEM50B-208	ENST00000474272	SIT1	Q9Y3P8	196 aa		6.09	□□□□□ -1.43
TMEM50B-208	ENST00000474272	EPHX1	P07099	455 aa		6.08	□□□□□ -1.44
TMEM50B-208	ENST00000474272	CNR2	P34972	360 aa		6.08	□□□□□ -1.44
TMEM50B-208	ENST00000474272	PUM1	Q14671	1186 aa	Known RBP eCLIP	6.08	□□□□□ -1.44
TMEM50B-208	ENST00000474272	ZXDC	Q2QGD7	858 aa	Predicted RBP	6.08	□□□□□ -1.44
TMEM50B-208	ENST00000474272	ZFYVE27	Q5T4F4	411 aa		6.08	□□□□□ -1.44
TMEM50B-208	ENST00000474272	B3GNT8	Q7Z7M8	397 aa		6.08	□□□□□ -1.44
TMEM50B-208	ENST00000474272	CARF	Q8N187	725 aa		6.08	□□□□□ -1.44
TMEM50B-208	ENST00000474272	LZTR1	Q8N653	840 aa		6.08	□□□□□ -1.44
TMEM50B-208	ENST00000474272	ZNF428	Q96B54	188 aa		6.08	□□□□□ -1.44
TMEM50B-208	ENST00000474272	RNF38	Q9H0F5	515 aa		6.08	□□□□□ -1.44
TMEM50B-208	ENST00000474272		A0A087WZG4	1122 aa		6.07	□□□□□ -1.44
TMEM50B-208	ENST00000474272	SH3D21	A4FU49	640 aa		6.07	□□□□□ -1.44
TMEM50B-208	ENST00000474272	C2orf71	A6NGG8	1288 aa		6.07	□□□□□ -1.44
TMEM50B-208	ENST00000474272	NOBOX	O60393	691 aa		6.07	□□□□□ -1.44
TMEM50B-208	ENST00000474272	SMAD4	Q13485	552 aa	Known RBP	6.07	□□□□□ -1.44
TMEM50B-208	ENST00000474272	EEF1DP3	Q658K8	133 aa		6.07	□□□□□ -1.44
TMEM50B-208	ENST00000474272	HEATR6	Q6AI08	1181 aa	Known RBP	6.07	□□□□□ -1.44
TMEM50B-208	ENST00000474272	RCSD1	Q6JBY9	416 aa		6.07	□□□□□ -1.44
TMEM50B-208	ENST00000474272	USP33	Q8TEY7	942 aa		6.07	□□□□□ -1.44
TMEM50B-208	ENST00000474272	RNF34	Q969K3	372 aa		6.07	□□□□□ -1.44
TMEM50B-208	ENST00000474272	DDX11	Q96FC9	970 aa		6.07	□□□□□ -1.44
TMEM50B-208	ENST00000474272	CRBN	Q96SW2	442 aa		6.07	□□□□□ -1.44
TMEM50B-208	ENST00000474272	KLHL25	Q9H0H3	589 aa		6.07	□□□□□ -1.44
TMEM50B-208	ENST00000474272	TMPRSS5	Q9H3S3	457 aa		6.07	□□□□□ -1.44
TMEM50B-208	ENST00000474272	SPATA6	Q9NWH7	488 aa	Predicted RBP	6.07	□□□□□ -1.44
TMEM50B-208	ENST00000474272	WHRN	Q9P202	907 aa		6.07	□□□□□ -1.44
TMEM50B-208	ENST00000474272		K7ESM1	405 aa		6.06	□□□□□ -1.44
TMEM50B-208	ENST00000474272	SEPHS1	P49903	392 aa		6.06	□□□□□ -1.44
TMEM50B-208	ENST00000474272	CABP7	Q86V35	215 aa		6.06	□□□□□ -1.44
TMEM50B-208	ENST00000474272	ZBTB8A	Q96BR9	441 aa		6.06	□□□□□ -1.44
TMEM50B-208	ENST00000474272	TSPAN17	Q96FV3	270 aa		6.06	□□□□□ -1.44
TMEM50B-208	ENST00000474272	MTA3	Q9BTC8	594 aa		6.06	□□□□□ -1.44
TMEM50B-208	ENST00000474272	BCL11A	Q9H165	835 aa		6.06	□□□□□ -1.44
TMEM50B-208	ENST00000474272	DDX41	Q9UJV9	622 aa	Known RBP	6.06	□□□□□ -1.44
TMEM50B-208	ENST00000474272	EFR3B	Q9Y2G0	817 aa		6.06	□□□□□ -1.44
TMEM50B-208	ENST00000474272		A0A1W2PQH9	124 aa		6.05	□□□□□ -1.44
TMEM50B-208	ENST00000474272	FUCA1	P04066	466 aa		6.05	□□□□□ -1.44
TMEM50B-208	ENST00000474272	NTRK1	P04629	796 aa		6.05	□□□□□ -1.44
TMEM50B-208	ENST00000474272	PAK2	Q13177	524 aa		6.05	□□□□□ -1.44
TMEM50B-208	ENST00000474272	STK32C	Q86UX6	486 aa		6.05	□□□□□ -1.44
TMEM50B-208	ENST00000474272	CGGBP1	Q9UFW8	167 aa	Predicted RBP	6.05	□□□□□ -1.44
TMEM50B-208	ENST00000474272	BACE2	Q9Y5Z0	518 aa		6.05	□□□□□ -1.44
TMEM50B-208	ENST00000474272	C7orf72	A4D263	438 aa		6.04	□□□□□ -1.44
TMEM50B-208	ENST00000474272	PPM1B	O75688	479 aa		6.04	□□□□□ -1.44
TMEM50B-208	ENST00000474272	SARS	P49591	514 aa	Known RBP	6.04	□□□□□ -1.44
TMEM50B-208	ENST00000474272	EIF6	P56537	245 aa	Known RBP	6.04	□□□□□ -1.44
TMEM50B-208	ENST00000474272	SLC7A5	Q01650	507 aa		6.04	□□□□□ -1.44
TMEM50B-208	ENST00000474272	PPP2R5E	Q16537	467 aa		6.04	□□□□□ -1.44
TMEM50B-208	ENST00000474272	MBLAC2	Q68D91	279 aa		6.04	□□□□□ -1.44
TMEM50B-208	ENST00000474272	KLHL6	Q8WZ60	621 aa		6.04	□□□□□ -1.44
TMEM50B-208	ENST00000474272	PEX11G	Q96HA9	241 aa		6.04	□□□□□ -1.44
TMEM50B-208	ENST00000474272	GPR20	Q99678	358 aa		6.04	□□□□□ -1.44
TMEM50B-208	ENST00000474272	LNPK	Q9C0E8	428 aa		6.04	□□□□□ -1.44
TMEM50B-208	ENST00000474272	GBP3	Q9H0R5	595 aa		6.04	□□□□□ -1.44
TMEM50B-208	ENST00000474272	GPRC5C	Q9NQ84	441 aa		6.04	□□□□□ -1.44
TMEM50B-208	ENST00000474272	SUGT1	Q9Y2Z0	365 aa		6.04	□□□□□ -1.44
TMEM50B-208	ENST00000474272	NPHP3-ACAD11	A0A0J9YXS1	232 aa		6.03	□□□□□ -1.44
TMEM50B-208	ENST00000474272	GJA9	P57773	515 aa		6.03	□□□□□ -1.44
TMEM50B-208	ENST00000474272	AMPD2	Q01433	879 aa		6.03	□□□□□ -1.44
TMEM50B-208	ENST00000474272	CACNB2	Q08289	660 aa	Predicted RBP	6.03	□□□□□ -1.44
TMEM50B-208	ENST00000474272	WWC2	Q6AWC2	1192 aa		6.03	□□□□□ -1.44
TMEM50B-208	ENST00000474272	ZNF761	Q86XN6	746 aa	Predicted RBP	6.03	□□□□□ -1.44
TMEM50B-208	ENST00000474272	FAM26E	Q8N5C1	309 aa		6.03	□□□□□ -1.44
TMEM50B-208	ENST00000474272	LGR4	Q9BXB1	951 aa		6.03	□□□□□ -1.44
TMEM50B-208	ENST00000474272	BTG4	Q9NY30	223 aa		6.03	□□□□□ -1.44
TMEM50B-208	ENST00000474272	CLEC1B	Q9P126	229 aa		6.03	□□□□□ -1.44

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