RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 SNX17Q15036 470 aa21.64■■□□□ 1.05
CCDC171-206ENST00000474193 QRICH1Q2TAL8 776 aa21.64■■□□□ 1.05
CCDC171-206ENST00000474193 TRIM60Q495X7 471 aa21.64■■□□□ 1.05
CCDC171-206ENST00000474193 KATNBL1Q9H079 304 aa21.64■■□□□ 1.05
CCDC171-206ENST00000474193 UPF3AQ9H1J1 476 aaKnown RBP21.64■■□□□ 1.05
CCDC171-206ENST00000474193 JMJD4Q9H9V9 463 aa21.64■■□□□ 1.05
CCDC171-206ENST00000474193 Q9Y3F1 56 aa21.64■■□□□ 1.05
CCDC171-206ENST00000474193 TRIOBPQ9H2D6 2365 aa21.63■■□□□ 1.05
CCDC171-206ENST00000474193 ELP1O95163 1332 aa21.63■■□□□ 1.05
CCDC171-206ENST00000474193 ASGR1P07306 291 aa21.63■■□□□ 1.05
CCDC171-206ENST00000474193 MDM2Q00987 491 aaPredicted RBP21.63■■□□□ 1.05
CCDC171-206ENST00000474193 CHST3Q7LGC8 479 aa21.63■■□□□ 1.05
CCDC171-206ENST00000474193 FBXO16Q8IX29 292 aaPredicted RBP21.63■■□□□ 1.05
CCDC171-206ENST00000474193 MORC4Q8TE76 937 aa21.63■■□□□ 1.05
CCDC171-206ENST00000474193 MROH7Q68CQ1 1323 aa21.62■■□□□ 1.05
CCDC171-206ENST00000474193 PALM3A6NDB9 673 aaPredicted RBP21.62■■□□□ 1.05
CCDC171-206ENST00000474193 DYNC1LI2O43237 492 aaPredicted RBP21.62■■□□□ 1.05
CCDC171-206ENST00000474193 TLE2Q04725 743 aa21.62■■□□□ 1.05
CCDC171-206ENST00000474193 BRDTQ58F21 947 aaPredicted RBP21.62■■□□□ 1.05
CCDC171-206ENST00000474193 CREB3L3Q68CJ9 461 aa21.62■■□□□ 1.05
CCDC171-206ENST00000474193 SLC30A10Q6XR72 485 aa21.62■■□□□ 1.05
CCDC171-206ENST00000474193 NFXL1Q6ZNB6 911 aa21.62■■□□□ 1.05
CCDC171-206ENST00000474193 TLK2Q86UE8 772 aa21.62■■□□□ 1.05
CCDC171-206ENST00000474193 STAG2Q8N3U4 1231 aa21.62■■□□□ 1.05
CCDC171-206ENST00000474193 TMEM87BQ96K49 555 aa21.62■■□□□ 1.05
CCDC171-206ENST00000474193 PURBQ96QR8 312 aaKnown RBP21.62■■□□□ 1.05
CCDC171-206ENST00000474193 MAD2L2Q9UI95 211 aa21.62■■□□□ 1.05
CCDC171-206ENST00000474193 CCDC69A6NI79 296 aa21.61■■□□□ 1.05
CCDC171-206ENST00000474193 SLC27A2O14975 620 aa21.61■■□□□ 1.05
CCDC171-206ENST00000474193 ZBTB5O15062 677 aa21.61■■□□□ 1.05
CCDC171-206ENST00000474193 CABYRO75952 493 aa21.61■■□□□ 1.05
CCDC171-206ENST00000474193 KIF5BP33176 963 aa21.61■■□□□ 1.05
CCDC171-206ENST00000474193 GRM4Q14833 912 aa21.61■■□□□ 1.05
CCDC171-206ENST00000474193 NECTIN1Q15223 517 aa21.61■■□□□ 1.05
CCDC171-206ENST00000474193 TAPT1Q6NXT6 567 aa21.61■■□□□ 1.05
CCDC171-206ENST00000474193 STOX1Q6ZVD7 989 aa21.61■■□□□ 1.05
CCDC171-206ENST00000474193 TDHQ8IZJ6 230 aa21.61■■□□□ 1.05
CCDC171-206ENST00000474193 CTCFLQ8NI51 663 aaPredicted RBP21.61■■□□□ 1.05
CCDC171-206ENST00000474193 NSUN6Q8TEA1 469 aaKnown RBP21.61■■□□□ 1.05
CCDC171-206ENST00000474193 WDR11Q9BZH6 1224 aa21.61■■□□□ 1.05
CCDC171-206ENST00000474193 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.6■■□□□ 1.05
CCDC171-206ENST00000474193 PRC1O43663 620 aa21.6■■□□□ 1.05
CCDC171-206ENST00000474193 PQBP1O60828 265 aaKnown RBP21.6■■□□□ 1.05
CCDC171-206ENST00000474193 CLTBP09497 229 aa21.6■■□□□ 1.05
CCDC171-206ENST00000474193 SMPD1P17405 629 aa21.6■■□□□ 1.05
CCDC171-206ENST00000474193 FSCN1Q16658 493 aaKnown RBP21.6■■□□□ 1.05
CCDC171-206ENST00000474193 C8orf34Q49A92 452 aa21.6■■□□□ 1.05
CCDC171-206ENST00000474193 MB21D2Q8IYB1 491 aaPredicted RBP21.6■■□□□ 1.05
CCDC171-206ENST00000474193 SAMD3Q8N6K7 520 aa21.6■■□□□ 1.05
CCDC171-206ENST00000474193 IGDCC4Q8TDY8 1250 aa21.6■■□□□ 1.05
CCDC171-206ENST00000474193 TOX2Q96NM4 488 aa21.6■■□□□ 1.05
CCDC171-206ENST00000474193 SEZ6LQ9BYH1 1024 aa21.6■■□□□ 1.05
CCDC171-206ENST00000474193 PDGFCQ9NRA1 345 aa21.6■■□□□ 1.05
CCDC171-206ENST00000474193 MAP3K20Q9NYL2 800 aaKnown RBP21.6■■□□□ 1.05
CCDC171-206ENST00000474193 GNEQ9Y223 722 aaKnown RBP21.6■■□□□ 1.05
CCDC171-206ENST00000474193 PCDHA1Q9Y5I3 950 aa21.6■■□□□ 1.05
CCDC171-206ENST00000474193 MYH6P13533 1939 aa21.6■■□□□ 1.05
CCDC171-206ENST00000474193 ASTN1O14525 1302 aa21.59■■□□□ 1.05
CCDC171-206ENST00000474193 A0A0U1RQG5 324 aaPredicted RBP21.59■■□□□ 1.05
CCDC171-206ENST00000474193 NKRFO15226 690 aaKnown RBP eCLIP21.59■■□□□ 1.05
CCDC171-206ENST00000474193 TLR3O15455 904 aaKnown RBP21.59■■□□□ 1.05
CCDC171-206ENST00000474193 CFBP00751 764 aa21.59■■□□□ 1.05
CCDC171-206ENST00000474193 GNAQP50148 359 aa21.59■■□□□ 1.05
CCDC171-206ENST00000474193 NKX3-2P78367 333 aa21.59■■□□□ 1.05
CCDC171-206ENST00000474193 KRT32Q14532 448 aa21.59■■□□□ 1.05
CCDC171-206ENST00000474193 DUSP28Q4G0W2 176 aa21.59■■□□□ 1.05
CCDC171-206ENST00000474193 CCSAPQ6IQ19 270 aaPredicted RBP21.59■■□□□ 1.05
CCDC171-206ENST00000474193 HOMER1Q86YM7 354 aa21.59■■□□□ 1.05
CCDC171-206ENST00000474193 SCFD2Q8WU76 684 aa21.59■■□□□ 1.05
CCDC171-206ENST00000474193 IWS1Q96ST2 819 aa21.59■■□□□ 1.05
CCDC171-206ENST00000474193 MAP3K14Q99558 947 aa21.59■■□□□ 1.05
CCDC171-206ENST00000474193 USP26Q9BXU7 913 aa21.59■■□□□ 1.05
CCDC171-206ENST00000474193 GPHNQ9NQX3 736 aaPredicted RBP21.59■■□□□ 1.05
CCDC171-206ENST00000474193 TMEM39AQ9NV64 488 aa21.59■■□□□ 1.05
CCDC171-206ENST00000474193 MYADML2A6NDP7 307 aa21.58■■□□□ 1.05
CCDC171-206ENST00000474193 ADCY6O43306 1168 aa21.58■■□□□ 1.05
CCDC171-206ENST00000474193 CALM1P0DP23 149 aa21.58■■□□□ 1.05
CCDC171-206ENST00000474193 CALM2P0DP24 149 aa21.58■■□□□ 1.05
CCDC171-206ENST00000474193 CALM3P0DP25 149 aa21.58■■□□□ 1.05
CCDC171-206ENST00000474193 BEX3Q00994 111 aa21.58■■□□□ 1.05
CCDC171-206ENST00000474193 TROAPQ12815 778 aa21.58■■□□□ 1.05
CCDC171-206ENST00000474193 ARHGEF16Q5VV41 709 aa21.58■■□□□ 1.05
CCDC171-206ENST00000474193 SYNE3Q6ZMZ3 975 aa21.58■■□□□ 1.05
CCDC171-206ENST00000474193 RMDN3Q96TC7 470 aa21.58■■□□□ 1.05
CCDC171-206ENST00000474193 LZTS2Q9BRK4 669 aa21.58■■□□□ 1.05
CCDC171-206ENST00000474193 RIOX1Q9H6W3 641 aa21.58■■□□□ 1.05
CCDC171-206ENST00000474193 UPF2Q9HAU5 1272 aaKnown RBP21.58■■□□□ 1.05
CCDC171-206ENST00000474193 PDLIM7Q9NR12 457 aa21.58■■□□□ 1.05
CCDC171-206ENST00000474193 TAF6LQ9Y6J9 622 aa21.58■■□□□ 1.05
CCDC171-206ENST00000474193 PNMA6FA0A0J9YX94 578 aa21.57■■□□□ 1.04
CCDC171-206ENST00000474193 DDAH1O94760 285 aa21.57■■□□□ 1.04
CCDC171-206ENST00000474193 RAG1P15918 1043 aa21.57■■□□□ 1.04
CCDC171-206ENST00000474193 HSPA4P34932 840 aa21.57■■□□□ 1.04
CCDC171-206ENST00000474193 CPT1AP50416 773 aa21.57■■□□□ 1.04
CCDC171-206ENST00000474193 ANTXR2P58335 489 aa21.57■■□□□ 1.04
CCDC171-206ENST00000474193 TTLL4Q14679 1199 aa21.57■■□□□ 1.04
CCDC171-206ENST00000474193 PPP2R5BQ15173 497 aa21.57■■□□□ 1.04
CCDC171-206ENST00000474193 STXBP2Q15833 593 aa21.57■■□□□ 1.04
CCDC171-206ENST00000474193 ANKRD33Q7Z3H0 272 aa21.57■■□□□ 1.04
CCDC171-206ENST00000474193 ZNF654Q8IZM8 581 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms