RNA–Protein interactions for RNA: ENST00000474157.1

GPNMB-209, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 513 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-209ENST00000474157 NAIF1Q69YI7 327 aaPredicted RBP8.31□□□□□ -1.08
GPNMB-209ENST00000474157 TXNDC11Q6PKC3 985 aa8.31□□□□□ -1.08
GPNMB-209ENST00000474157 TADA2BQ86TJ2 420 aa8.31□□□□□ -1.08
GPNMB-209ENST00000474157 RELL1Q8IUW5 271 aa8.31□□□□□ -1.08
GPNMB-209ENST00000474157 APLFQ8IW19 511 aaPredicted RBP8.31□□□□□ -1.08
GPNMB-209ENST00000474157 ZNF654Q8IZM8 581 aa8.31□□□□□ -1.08
GPNMB-209ENST00000474157 CTCFLQ8NI51 663 aaPredicted RBP8.31□□□□□ -1.08
GPNMB-209ENST00000474157 DTNBP1Q96EV8 351 aa8.31□□□□□ -1.08
GPNMB-209ENST00000474157 PLEKHG4BQ96PX9 1271 aa8.31□□□□□ -1.08
GPNMB-209ENST00000474157 RSRP1Q9BUV0 290 aa8.31□□□□□ -1.08
GPNMB-209ENST00000474157 MTFR1LQ9H019 292 aa8.31□□□□□ -1.08
GPNMB-209ENST00000474157 ACBD3Q9H3P7 528 aa8.31□□□□□ -1.08
GPNMB-209ENST00000474157 RMI1Q9H9A7 625 aa8.31□□□□□ -1.08
GPNMB-209ENST00000474157 SRA1Q9HD15 236 aaKnown RBP8.31□□□□□ -1.08
GPNMB-209ENST00000474157 LRRC4BQ9NT99 713 aa8.31□□□□□ -1.08
GPNMB-209ENST00000474157 THRAP3Q9Y2W1 955 aaKnown RBP8.31□□□□□ -1.08
GPNMB-209ENST00000474157 NRXN3Q9Y4C0 1643 aa8.31□□□□□ -1.08
GPNMB-209ENST00000474157 SBNO1A3KN83 1393 aa8.31□□□□□ -1.08
GPNMB-209ENST00000474157 GOLGA6L19H0YKK7 550 aa8.3□□□□□ -1.08
GPNMB-209ENST00000474157 TPD52L2O43399 206 aaKnown RBP8.3□□□□□ -1.08
GPNMB-209ENST00000474157 H2AFXP16104 143 aaPredicted RBP8.3□□□□□ -1.08
GPNMB-209ENST00000474157 LIG3P49916 1009 aa8.3□□□□□ -1.08
GPNMB-209ENST00000474157 PPP2R3AQ06190 1150 aa8.3□□□□□ -1.08
GPNMB-209ENST00000474157 G3BP1Q13283 466 aaKnown RBP eCLIP8.3□□□□□ -1.08
GPNMB-209ENST00000474157 PWP1Q13610 501 aa8.3□□□□□ -1.08
GPNMB-209ENST00000474157 NAALADL2Q58DX5 795 aa8.3□□□□□ -1.08
GPNMB-209ENST00000474157 CCDC80Q76M96 950 aa8.3□□□□□ -1.08
GPNMB-209ENST00000474157 GET4Q7L5D6 327 aaPredicted RBP8.3□□□□□ -1.08
GPNMB-209ENST00000474157 FILIP1Q7Z7B0 1213 aa8.3□□□□□ -1.08
GPNMB-209ENST00000474157 WFDC8Q8IUA0 241 aa8.3□□□□□ -1.08
GPNMB-209ENST00000474157 CCDC50Q8IVM0 306 aa8.3□□□□□ -1.08
GPNMB-209ENST00000474157 WDR63Q8IWG1 891 aa8.3□□□□□ -1.08
GPNMB-209ENST00000474157 ANKRD13AQ8IZ07 590 aa8.3□□□□□ -1.08
GPNMB-209ENST00000474157 MYOCDQ8IZQ8 938 aa8.3□□□□□ -1.08
GPNMB-209ENST00000474157 ATL2Q8NHH9 583 aa8.3□□□□□ -1.08
GPNMB-209ENST00000474157 MAGEC3Q8TD91 643 aa8.3□□□□□ -1.08
GPNMB-209ENST00000474157 C22orf23Q9BZE7 217 aa8.3□□□□□ -1.08
GPNMB-209ENST00000474157 TSPY26PQ9H489 355 aa8.3□□□□□ -1.08
GPNMB-209ENST00000474157 PPME1Q9Y570 386 aa8.3□□□□□ -1.08
GPNMB-209ENST00000474157 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.3□□□□□ -1.08
GPNMB-209ENST00000474157 ANKRD36BQ8N2N9 1353 aa8.3□□□□□ -1.08
GPNMB-209ENST00000474157 PRAG1Q86YV5 1406 aa8.29□□□□□ -1.08
GPNMB-209ENST00000474157 MINDY4BA8MYZ0 360 aa8.29□□□□□ -1.08
GPNMB-209ENST00000474157 SOX1O00570 391 aaPredicted RBP8.29□□□□□ -1.08
GPNMB-209ENST00000474157 EPB41L2O43491 1005 aaKnown RBP8.29□□□□□ -1.08
GPNMB-209ENST00000474157 NEMFO60524 1076 aa8.29□□□□□ -1.08
GPNMB-209ENST00000474157 RTN2O75298 545 aa8.29□□□□□ -1.08
GPNMB-209ENST00000474157 CCDC175P0C221 793 aa8.29□□□□□ -1.08
GPNMB-209ENST00000474157 HARSP12081 509 aaKnown RBP8.29□□□□□ -1.08
GPNMB-209ENST00000474157 PAX3P23760 479 aa8.29□□□□□ -1.08
GPNMB-209ENST00000474157 GBP2P32456 591 aaPredicted RBP8.29□□□□□ -1.08
GPNMB-209ENST00000474157 TNNI2P48788 182 aa8.29□□□□□ -1.08
GPNMB-209ENST00000474157 CDR1P51861 262 aa8.29□□□□□ -1.08
GPNMB-209ENST00000474157 DHX8Q14562 1220 aaKnown RBP8.29□□□□□ -1.08
GPNMB-209ENST00000474157 SLMAPQ14BN4 828 aa8.29□□□□□ -1.08
GPNMB-209ENST00000474157 PCNX4Q63HM2 1172 aa8.29□□□□□ -1.08
GPNMB-209ENST00000474157 HGSNATQ68CP4 663 aa8.29□□□□□ -1.08
GPNMB-209ENST00000474157 TTBK2Q6IQ55 1244 aa8.29□□□□□ -1.08
GPNMB-209ENST00000474157 RCSD1Q6JBY9 416 aa8.29□□□□□ -1.08
GPNMB-209ENST00000474157 TREML4Q6UXN2 200 aa8.29□□□□□ -1.08
GPNMB-209ENST00000474157 NFXL1Q6ZNB6 911 aa8.29□□□□□ -1.08
GPNMB-209ENST00000474157 CCDC73Q6ZRK6 1079 aa8.29□□□□□ -1.08
GPNMB-209ENST00000474157 BRAPQ7Z569 592 aa8.29□□□□□ -1.08
GPNMB-209ENST00000474157 WAPLQ7Z5K2 1190 aa8.29□□□□□ -1.08
GPNMB-209ENST00000474157 APBB1IPQ7Z5R6 666 aaPredicted RBP8.29□□□□□ -1.08
GPNMB-209ENST00000474157 IQCF2Q8IXL9 164 aa8.29□□□□□ -1.08
GPNMB-209ENST00000474157 PMFBP1Q8TBY8 1022 aa8.29□□□□□ -1.08
GPNMB-209ENST00000474157 SLC7A3Q8WY07 619 aa8.29□□□□□ -1.08
GPNMB-209ENST00000474157 PRDM11Q9NQV5 511 aa8.29□□□□□ -1.08
GPNMB-209ENST00000474157 MCM8Q9UJA3 840 aa8.29□□□□□ -1.08
GPNMB-209ENST00000474157 CTDP1Q9Y5B0 961 aaPredicted RBP8.29□□□□□ -1.08
GPNMB-209ENST00000474157 NWD2Q9ULI1 1742 aa8.29□□□□□ -1.08
GPNMB-209ENST00000474157 CLTCL1P53675 1640 aa8.29□□□□□ -1.08
GPNMB-209ENST00000474157 NRKQ7Z2Y5 1582 aa8.28□□□□□ -1.08
GPNMB-209ENST00000474157 NUP155O75694 1391 aa8.28□□□□□ -1.08
GPNMB-209ENST00000474157 LINC01387J3KSC0 135 aa8.28□□□□□ -1.08
GPNMB-209ENST00000474157 CBFA2T2O43439 604 aa8.28□□□□□ -1.08
GPNMB-209ENST00000474157 E2F6O75461 281 aa8.28□□□□□ -1.08
GPNMB-209ENST00000474157 RTN3O95197 1032 aaPredicted RBP8.28□□□□□ -1.08
GPNMB-209ENST00000474157 TRPC1P48995 793 aa8.28□□□□□ -1.08
GPNMB-209ENST00000474157 PREPLQ4J6C6 727 aaPredicted RBP8.28□□□□□ -1.08
GPNMB-209ENST00000474157 MSL1Q68DK7 614 aa8.28□□□□□ -1.08
GPNMB-209ENST00000474157 TTC19Q6DKK2 380 aaPredicted RBP8.28□□□□□ -1.08
GPNMB-209ENST00000474157 FAM117BQ6P1L5 589 aa8.28□□□□□ -1.08
GPNMB-209ENST00000474157 CCDC170Q8IYT3 715 aa8.28□□□□□ -1.08
GPNMB-209ENST00000474157 PHC3Q8NDX5 983 aa8.28□□□□□ -1.08
GPNMB-209ENST00000474157 SAAL1Q96ER3 474 aa8.28□□□□□ -1.08
GPNMB-209ENST00000474157 TMEM74Q96NL1 305 aa8.28□□□□□ -1.08
GPNMB-209ENST00000474157 TINF2Q9BSI4 451 aa8.28□□□□□ -1.08
GPNMB-209ENST00000474157 CAPN10Q9HC96 672 aa8.28□□□□□ -1.08
GPNMB-209ENST00000474157 PRDM6Q9NQX0 595 aa8.28□□□□□ -1.08
GPNMB-209ENST00000474157 STK32BQ9NY57 414 aa8.28□□□□□ -1.08
GPNMB-209ENST00000474157 TLR6Q9Y2C9 796 aa8.28□□□□□ -1.08
GPNMB-209ENST00000474157 TNS1Q9HBL0 1735 aaKnown RBP8.28□□□□□ -1.08
GPNMB-209ENST00000474157 CCDC171Q6TFL3 1326 aa8.28□□□□□ -1.08
GPNMB-209ENST00000474157 CDC42BPGQ6DT37 1551 aa8.27□□□□□ -1.09
GPNMB-209ENST00000474157 MAP3K5Q99683 1374 aa8.27□□□□□ -1.09
GPNMB-209ENST00000474157 U2SURPO15042 1029 aaKnown RBP8.27□□□□□ -1.09
GPNMB-209ENST00000474157 OPA1O60313 960 aa8.27□□□□□ -1.09
GPNMB-209ENST00000474157 GRIN3BO60391 1043 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms