RNA–Protein interactions for RNA: ENST00000474144.5

TMEM54-204, Transcript of transmembrane protein 54, humanhuman

TSL 3

Gene TMEM54, Length 748 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-204ENST00000474144 PCSK9Q8NBP7 692 aaKnown RBP23.23■■□□□ 1.31
TMEM54-204ENST00000474144 BADQ92934 168 aa23.23■■□□□ 1.31
TMEM54-204ENST00000474144 IFIT3O14879 490 aaKnown RBP23.22■■□□□ 1.31
TMEM54-204ENST00000474144 DYNC1LI2O43237 492 aaPredicted RBP23.22■■□□□ 1.31
TMEM54-204ENST00000474144 CLTBP09497 229 aa23.22■■□□□ 1.31
TMEM54-204ENST00000474144 NKX3-2P78367 333 aa23.22■■□□□ 1.31
TMEM54-204ENST00000474144 IQSEC1Q6DN90 963 aa23.22■■□□□ 1.31
TMEM54-204ENST00000474144 KIAA1211Q6ZU35 1233 aa23.22■■□□□ 1.31
TMEM54-204ENST00000474144 CENPQQ7L2Z9 268 aaPredicted RBP23.22■■□□□ 1.31
TMEM54-204ENST00000474144 NCOA7Q8NI08 942 aa23.22■■□□□ 1.31
TMEM54-204ENST00000474144 GLT1D1Q96MS3 346 aa23.22■■□□□ 1.31
TMEM54-204ENST00000474144 VTA1Q9NP79 307 aa23.22■■□□□ 1.31
TMEM54-204ENST00000474144 MAD2L2Q9UI95 211 aa23.22■■□□□ 1.31
TMEM54-204ENST00000474144 MYH6P13533 1939 aa23.21■■□□□ 1.31
TMEM54-204ENST00000474144 RALYLQ86SE5 291 aaKnown RBP23.21■■□□□ 1.31
TMEM54-204ENST00000474144 LSG1Q9H089 658 aaKnown RBP23.21■■□□□ 1.31
TMEM54-204ENST00000474144 ABCB11O95342 1321 aa23.2■■□□□ 1.3
TMEM54-204ENST00000474144 KLRF2D3W0D1 207 aa23.2■■□□□ 1.3
TMEM54-204ENST00000474144 ANTXR2P58335 489 aa23.2■■□□□ 1.3
TMEM54-204ENST00000474144 FAAP100Q0VG06 881 aa23.2■■□□□ 1.3
TMEM54-204ENST00000474144 LRIT3Q3SXY7 679 aa23.2■■□□□ 1.3
TMEM54-204ENST00000474144 ANKRD33Q7Z3H0 272 aa23.2■■□□□ 1.3
TMEM54-204ENST00000474144 VTI1AQ96AJ9 217 aa23.2■■□□□ 1.3
TMEM54-204ENST00000474144 ESYT1Q9BSJ8 1104 aa23.2■■□□□ 1.3
TMEM54-204ENST00000474144 ELP1O95163 1332 aa23.19■■□□□ 1.3
TMEM54-204ENST00000474144 PALM3A6NDB9 673 aaPredicted RBP23.19■■□□□ 1.3
TMEM54-204ENST00000474144 WTAPQ15007 396 aa23.19■■□□□ 1.3
TMEM54-204ENST00000474144 FSCN1Q16658 493 aaKnown RBP23.19■■□□□ 1.3
TMEM54-204ENST00000474144 SLC35G1Q2M3R5 365 aa23.19■■□□□ 1.3
TMEM54-204ENST00000474144 CXCL17Q6UXB2 119 aa23.19■■□□□ 1.3
TMEM54-204ENST00000474144 FBXO11Q86XK2 927 aa23.19■■□□□ 1.3
TMEM54-204ENST00000474144 MB21D2Q8IYB1 491 aaPredicted RBP23.19■■□□□ 1.3
TMEM54-204ENST00000474144 RGS22Q8NE09 1264 aa23.19■■□□□ 1.3
TMEM54-204ENST00000474144 AP5M1Q9H0R1 490 aa23.19■■□□□ 1.3
TMEM54-204ENST00000474144 COL20A1Q9P218 1284 aa23.19■■□□□ 1.3
TMEM54-204ENST00000474144 LOC102724159A0A0B4J2E5 919 aa23.18■■□□□ 1.3
TMEM54-204ENST00000474144 ERICH2A1L162 156 aa23.18■■□□□ 1.3
TMEM54-204ENST00000474144 PPP1R11O60927 126 aaPredicted RBP23.18■■□□□ 1.3
TMEM54-204ENST00000474144 EDNRBP24530 442 aa23.18■■□□□ 1.3
TMEM54-204ENST00000474144 CDK7P50613 346 aa23.18■■□□□ 1.3
TMEM54-204ENST00000474144 PDE4DQ08499 809 aa23.18■■□□□ 1.3
TMEM54-204ENST00000474144 COL9A3Q14050 684 aaPredicted RBP23.18■■□□□ 1.3
TMEM54-204ENST00000474144 GRM4Q14833 912 aa23.18■■□□□ 1.3
TMEM54-204ENST00000474144 PWP2Q15269 919 aaKnown RBP23.18■■□□□ 1.3
TMEM54-204ENST00000474144 DNERQ8NFT8 737 aa23.18■■□□□ 1.3
TMEM54-204ENST00000474144 TOX2Q96NM4 488 aa23.18■■□□□ 1.3
TMEM54-204ENST00000474144 TAAR1Q96RJ0 339 aa23.18■■□□□ 1.3
TMEM54-204ENST00000474144 WDR11Q9BZH6 1224 aa23.18■■□□□ 1.3
TMEM54-204ENST00000474144 GPHNQ9NQX3 736 aaPredicted RBP23.18■■□□□ 1.3
TMEM54-204ENST00000474144 TMEM39AQ9NV64 488 aa23.18■■□□□ 1.3
TMEM54-204ENST00000474144 RBM47A0AV96 593 aaKnown RBP23.17■■□□□ 1.3
TMEM54-204ENST00000474144 ARVCFO00192 962 aa23.17■■□□□ 1.3
TMEM54-204ENST00000474144 KIAA0355O15063 1070 aa23.17■■□□□ 1.3
TMEM54-204ENST00000474144 SHHQ15465 462 aa23.17■■□□□ 1.3
TMEM54-204ENST00000474144 DUSP28Q4G0W2 176 aa23.17■■□□□ 1.3
TMEM54-204ENST00000474144 C9orf50Q5SZB4 431 aa23.17■■□□□ 1.3
TMEM54-204ENST00000474144 SYTL5Q8TDW5 730 aaPredicted RBP23.17■■□□□ 1.3
TMEM54-204ENST00000474144 IGDCC4Q8TDY8 1250 aa23.17■■□□□ 1.3
TMEM54-204ENST00000474144 MTMR8Q96EF0 704 aa23.17■■□□□ 1.3
TMEM54-204ENST00000474144 Q9Y3F1 56 aa23.17■■□□□ 1.3
TMEM54-204ENST00000474144 A0A0U1RQG5 324 aaPredicted RBP23.16■■□□□ 1.3
TMEM54-204ENST00000474144 DCDC2CA8MYV0 355 aa23.16■■□□□ 1.3
TMEM54-204ENST00000474144 TROAPQ12815 778 aa23.16■■□□□ 1.3
TMEM54-204ENST00000474144 TMEM67Q5HYA8 995 aa23.16■■□□□ 1.3
TMEM54-204ENST00000474144 MRPL11Q9Y3B7 192 aaKnown RBP23.16■■□□□ 1.3
TMEM54-204ENST00000474144 OPLAHO14841 1288 aa23.15■■□□□ 1.3
TMEM54-204ENST00000474144 SLC27A2O14975 620 aa23.15■■□□□ 1.3
TMEM54-204ENST00000474144 RAG1P15918 1043 aa23.15■■□□□ 1.3
TMEM54-204ENST00000474144 SART3Q15020 963 aaKnown RBP23.15■■□□□ 1.3
TMEM54-204ENST00000474144 BMP2KLQ5H9B9 411 aa23.15■■□□□ 1.3
TMEM54-204ENST00000474144 HOMER1Q86YM7 354 aa23.15■■□□□ 1.3
TMEM54-204ENST00000474144 MCF2L2Q86YR7 1114 aa23.15■■□□□ 1.3
TMEM54-204ENST00000474144 COPS5Q92905 334 aa23.15■■□□□ 1.3
TMEM54-204ENST00000474144 AMNQ9BXJ7 453 aa23.15■■□□□ 1.3
TMEM54-204ENST00000474144 GRIN2DO15399 1336 aa23.14■■□□□ 1.3
TMEM54-204ENST00000474144 ZBTB5O15062 677 aa23.14■■□□□ 1.29
TMEM54-204ENST00000474144 CYTH3O43739 400 aa23.14■■□□□ 1.29
TMEM54-204ENST00000474144 EPHB4P54760 987 aa23.14■■□□□ 1.29
TMEM54-204ENST00000474144 PSMC6P62333 389 aa23.14■■□□□ 1.29
TMEM54-204ENST00000474144 FAM126BQ8IXS8 530 aa23.14■■□□□ 1.29
TMEM54-204ENST00000474144 PIGSQ96S52 555 aa23.14■■□□□ 1.29
TMEM54-204ENST00000474144 MPHOSPH6Q99547 160 aaKnown RBP23.14■■□□□ 1.29
TMEM54-204ENST00000474144 ANO2Q9NQ90 1003 aa23.14■■□□□ 1.29
TMEM54-204ENST00000474144 LAMA2P24043 3122 aaKnown RBP23.14■■□□□ 1.29
TMEM54-204ENST00000474144 MROH7Q68CQ1 1323 aa23.13■■□□□ 1.29
TMEM54-204ENST00000474144 ZEB2O60315 1214 aa23.13■■□□□ 1.29
TMEM54-204ENST00000474144 ARIH2O95376 493 aa23.13■■□□□ 1.29
TMEM54-204ENST00000474144 CFBP00751 764 aa23.13■■□□□ 1.29
TMEM54-204ENST00000474144 NECTIN1Q15223 517 aa23.13■■□□□ 1.29
TMEM54-204ENST00000474144 CREB3L3Q68CJ9 461 aa23.13■■□□□ 1.29
TMEM54-204ENST00000474144 Q7L0L9 218 aa23.13■■□□□ 1.29
TMEM54-204ENST00000474144 OR6J1Q8NGC5 347 aa23.13■■□□□ 1.29
TMEM54-204ENST00000474144 MYL10Q9BUA6 226 aa23.13■■□□□ 1.29
TMEM54-204ENST00000474144 RIOX1Q9H6W3 641 aa23.13■■□□□ 1.29
TMEM54-204ENST00000474144 LY9Q9HBG7 655 aa23.13■■□□□ 1.29
TMEM54-204ENST00000474144 TBX21Q9UL17 535 aa23.13■■□□□ 1.29
TMEM54-204ENST00000474144 PRC1O43663 620 aa23.12■■□□□ 1.29
TMEM54-204ENST00000474144 CABYRO75952 493 aa23.12■■□□□ 1.29
TMEM54-204ENST00000474144 ITGA7Q13683 1181 aa23.12■■□□□ 1.29
TMEM54-204ENST00000474144 CATIPQ7Z7H3 387 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms