RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 IL6STP40189 918 aaPredicted RBP6.87□□□□□ -1.31
ATPAF1-204ENST00000474020 CTSWP56202 376 aa6.87□□□□□ -1.31
ATPAF1-204ENST00000474020 ARTNQ5T4W7 220 aa6.87□□□□□ -1.31
ATPAF1-204ENST00000474020 ATL3Q6DD88 541 aa6.87□□□□□ -1.31
ATPAF1-204ENST00000474020 LDHAL6AQ6ZMR3 332 aa6.87□□□□□ -1.31
ATPAF1-204ENST00000474020 Q6ZUG5 572 aa6.87□□□□□ -1.31
ATPAF1-204ENST00000474020 ZNF589Q86UQ0 364 aaPredicted RBP6.87□□□□□ -1.31
ATPAF1-204ENST00000474020 BSNDQ8WZ55 320 aa6.87□□□□□ -1.31
ATPAF1-204ENST00000474020 GTF3C6Q969F1 213 aa6.87□□□□□ -1.31
ATPAF1-204ENST00000474020 BHLHE41Q9C0J9 482 aaPredicted RBP6.87□□□□□ -1.31
ATPAF1-204ENST00000474020 ZFYVE28Q9HCC9 887 aa6.87□□□□□ -1.31
ATPAF1-204ENST00000474020 MTMR6Q9Y217 621 aa6.87□□□□□ -1.31
ATPAF1-204ENST00000474020 ZNF652Q9Y2D9 606 aa6.87□□□□□ -1.31
ATPAF1-204ENST00000474020 GLI3P10071 1580 aa6.86□□□□□ -1.31
ATPAF1-204ENST00000474020 BCL9O00512 1426 aa6.86□□□□□ -1.31
ATPAF1-204ENST00000474020 GOLGA6L6A8MZA4 724 aa6.86□□□□□ -1.31
ATPAF1-204ENST00000474020 CDKL5O76039 1030 aa6.86□□□□□ -1.31
ATPAF1-204ENST00000474020 TPM3P06753 285 aa6.86□□□□□ -1.31
ATPAF1-204ENST00000474020 CSF1RP07333 972 aa6.86□□□□□ -1.31
ATPAF1-204ENST00000474020 TIMM10P62072 90 aa6.86□□□□□ -1.31
ATPAF1-204ENST00000474020 STK3Q13188 491 aa6.86□□□□□ -1.31
ATPAF1-204ENST00000474020 DDB1Q16531 1140 aa6.86□□□□□ -1.31
ATPAF1-204ENST00000474020 LRRC24Q50LG9 513 aa6.86□□□□□ -1.31
ATPAF1-204ENST00000474020 PARP10Q53GL7 1025 aa6.86□□□□□ -1.31
ATPAF1-204ENST00000474020 PEAR1Q5VY43 1037 aaPredicted RBP6.86□□□□□ -1.31
ATPAF1-204ENST00000474020 NAA16Q6N069 864 aaPredicted RBP6.86□□□□□ -1.31
ATPAF1-204ENST00000474020 CPLX2Q6PUV4 134 aaKnown RBP6.86□□□□□ -1.31
ATPAF1-204ENST00000474020 NECAB1Q8N987 351 aa6.86□□□□□ -1.31
ATPAF1-204ENST00000474020 APPBP2Q92624 585 aa6.86□□□□□ -1.31
ATPAF1-204ENST00000474020 SMARCC1Q92922 1105 aaPredicted RBP6.86□□□□□ -1.31
ATPAF1-204ENST00000474020 ZNF512BQ96KM6 892 aaPredicted RBP6.86□□□□□ -1.31
ATPAF1-204ENST00000474020 SPATA32Q96LK8 384 aa6.86□□□□□ -1.31
ATPAF1-204ENST00000474020 UBL7Q96S82 380 aaPredicted RBP6.86□□□□□ -1.31
ATPAF1-204ENST00000474020 NUP62CLQ9H1M0 184 aa6.86□□□□□ -1.31
ATPAF1-204ENST00000474020 ZFP64Q9NPA5 681 aa6.86□□□□□ -1.31
ATPAF1-204ENST00000474020 DDX19AQ9NUU7 478 aaKnown RBP6.86□□□□□ -1.31
ATPAF1-204ENST00000474020 ASAP1Q9ULH1 1129 aa6.86□□□□□ -1.31
ATPAF1-204ENST00000474020 PLCH1Q4KWH8 1693 aa6.86□□□□□ -1.31
ATPAF1-204ENST00000474020 DISP2A7MBM2 1401 aa6.85□□□□□ -1.31
ATPAF1-204ENST00000474020 MAST3O60307 1309 aa6.85□□□□□ -1.31
ATPAF1-204ENST00000474020 WDR19Q8NEZ3 1342 aa6.85□□□□□ -1.31
ATPAF1-204ENST00000474020 ZNF213O14771 459 aa6.85□□□□□ -1.31
ATPAF1-204ENST00000474020 CPLX1O14810 134 aa6.85□□□□□ -1.31
ATPAF1-204ENST00000474020 NDUFB5O43674 189 aa6.85□□□□□ -1.31
ATPAF1-204ENST00000474020 PFKFB2O60825 505 aa6.85□□□□□ -1.31
ATPAF1-204ENST00000474020 LARGE1O95461 756 aa6.85□□□□□ -1.31
ATPAF1-204ENST00000474020 CAVIN2O95810 425 aa6.85□□□□□ -1.31
ATPAF1-204ENST00000474020 CYP21A2P08686 494 aa6.85□□□□□ -1.31
ATPAF1-204ENST00000474020 CYP19A1P11511 503 aaPredicted RBP6.85□□□□□ -1.31
ATPAF1-204ENST00000474020 IGHMBP2P38935 993 aaKnown RBP6.85□□□□□ -1.31
ATPAF1-204ENST00000474020 ARL4DP49703 201 aa6.85□□□□□ -1.31
ATPAF1-204ENST00000474020 ARHGAP4P98171 946 aa6.85□□□□□ -1.31
ATPAF1-204ENST00000474020 C19orf57Q0VDD7 668 aa6.85□□□□□ -1.31
ATPAF1-204ENST00000474020 TOB2Q14106 344 aaPredicted RBP6.85□□□□□ -1.31
ATPAF1-204ENST00000474020 LRP8Q14114 963 aa6.85□□□□□ -1.31
ATPAF1-204ENST00000474020 PUM3Q15397 648 aaKnown RBP6.85□□□□□ -1.31
ATPAF1-204ENST00000474020 ZRSR1Q15695 479 aaKnown RBP6.85□□□□□ -1.31
ATPAF1-204ENST00000474020 CCDC152Q4G0S7 254 aa6.85□□□□□ -1.31
ATPAF1-204ENST00000474020 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.85□□□□□ -1.31
ATPAF1-204ENST00000474020 CCDC129Q6ZRS4 1044 aa6.85□□□□□ -1.31
ATPAF1-204ENST00000474020 VN1R5Q7Z5H4 357 aa6.85□□□□□ -1.31
ATPAF1-204ENST00000474020 NLRP10Q86W26 655 aa6.85□□□□□ -1.31
ATPAF1-204ENST00000474020 NCOA7Q8NI08 942 aa6.85□□□□□ -1.31
ATPAF1-204ENST00000474020 BICD2Q8TD16 824 aa6.85□□□□□ -1.31
ATPAF1-204ENST00000474020 UBASH3BQ8TF42 649 aa6.85□□□□□ -1.31
ATPAF1-204ENST00000474020 SLC7A3Q8WY07 619 aa6.85□□□□□ -1.31
ATPAF1-204ENST00000474020 BRF1Q92994 677 aa6.85□□□□□ -1.31
ATPAF1-204ENST00000474020 EDC3Q96F86 508 aaKnown RBP6.85□□□□□ -1.31
ATPAF1-204ENST00000474020 FAM89AQ96GI7 184 aa6.85□□□□□ -1.31
ATPAF1-204ENST00000474020 MPHOSPH8Q99549 860 aa6.85□□□□□ -1.31
ATPAF1-204ENST00000474020 UTP14AQ9BVJ6 771 aaKnown RBP6.85□□□□□ -1.31
ATPAF1-204ENST00000474020 LATS2Q9NRM7 1088 aa6.85□□□□□ -1.31
ATPAF1-204ENST00000474020 AHDC1Q5TGY3 1603 aaPredicted RBP6.85□□□□□ -1.31
ATPAF1-204ENST00000474020 TJP1Q07157 1748 aa6.84□□□□□ -1.31
ATPAF1-204ENST00000474020 E7EWF7 191 aa6.84□□□□□ -1.31
ATPAF1-204ENST00000474020 CTAGE5O15320 804 aa6.84□□□□□ -1.31
ATPAF1-204ENST00000474020 GSC2O15499 205 aa6.84□□□□□ -1.31
ATPAF1-204ENST00000474020 HSPD1P10809 573 aaKnown RBP6.84□□□□□ -1.31
ATPAF1-204ENST00000474020 GPTP24298 496 aa6.84□□□□□ -1.31
ATPAF1-204ENST00000474020 KIAA2012Q0VF49 1180 aa6.84□□□□□ -1.31
ATPAF1-204ENST00000474020 MAP3K12Q12852 859 aa6.84□□□□□ -1.31
ATPAF1-204ENST00000474020 IKBKEQ14164 716 aa6.84□□□□□ -1.31
ATPAF1-204ENST00000474020 UBE3CQ15386 1083 aa6.84□□□□□ -1.31
ATPAF1-204ENST00000474020 MAP3K11Q16584 847 aa6.84□□□□□ -1.31
ATPAF1-204ENST00000474020 SASS6Q6UVJ0 657 aa6.84□□□□□ -1.31
ATPAF1-204ENST00000474020 SYNE3Q6ZMZ3 975 aa6.84□□□□□ -1.31
ATPAF1-204ENST00000474020 CCDC73Q6ZRK6 1079 aa6.84□□□□□ -1.31
ATPAF1-204ENST00000474020 ARMC10Q8N2F6 343 aa6.84□□□□□ -1.31
ATPAF1-204ENST00000474020 RNF214Q8ND24 703 aa6.84□□□□□ -1.31
ATPAF1-204ENST00000474020 RGS22Q8NE09 1264 aa6.84□□□□□ -1.31
ATPAF1-204ENST00000474020 LPIN2Q92539 896 aa6.84□□□□□ -1.31
ATPAF1-204ENST00000474020 ZNF274Q96GC6 653 aaPredicted RBP6.84□□□□□ -1.31
ATPAF1-204ENST00000474020 FAM46AQ96IP4 442 aaKnown RBP6.84□□□□□ -1.31
ATPAF1-204ENST00000474020 TCEANC2Q96MN5 208 aa6.84□□□□□ -1.31
ATPAF1-204ENST00000474020 NAP1L5Q96NT1 182 aaPredicted RBP6.84□□□□□ -1.31
ATPAF1-204ENST00000474020 CDC5LQ99459 802 aaKnown RBP6.84□□□□□ -1.31
ATPAF1-204ENST00000474020 NACAP1Q9BZK3 213 aa6.84□□□□□ -1.31
ATPAF1-204ENST00000474020 TNMDQ9H2S6 317 aa6.84□□□□□ -1.31
ATPAF1-204ENST00000474020 GNL3LQ9NVN8 582 aaKnown RBP6.84□□□□□ -1.31
ATPAF1-204ENST00000474020 RNF112Q9ULX5 631 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 171.3 ms