RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 PWP2Q15269 919 aaKnown RBP15.89■□□□□ 0.13
USF1-205ENST00000473969 ANKRD1Q15327 319 aa15.89■□□□□ 0.13
USF1-205ENST00000473969 SLC30A10Q6XR72 485 aa15.89■□□□□ 0.13
USF1-205ENST00000473969 DNERQ8NFT8 737 aa15.89■□□□□ 0.13
USF1-205ENST00000473969 ABHD16BQ9H3Z7 469 aa15.89■□□□□ 0.13
USF1-205ENST00000473969 MAP3K20Q9NYL2 800 aaKnown RBP15.89■□□□□ 0.13
USF1-205ENST00000473969 FAM184BQ9ULE4 1060 aa15.89■□□□□ 0.13
USF1-205ENST00000473969 GCOM1H8Y6P7 765 aaPredicted RBP15.88■□□□□ 0.13
USF1-205ENST00000473969 PPP1R11O60927 126 aaPredicted RBP15.88■□□□□ 0.13
USF1-205ENST00000473969 IGHA2P01877 340 aa15.88■□□□□ 0.13
USF1-205ENST00000473969 POLR2MP0CAP2 368 aa15.88■□□□□ 0.13
USF1-205ENST00000473969 AKR1A1P14550 325 aa15.88■□□□□ 0.13
USF1-205ENST00000473969 ALDH5A1P51649 535 aaPredicted RBP15.88■□□□□ 0.13
USF1-205ENST00000473969 ACVR2BQ13705 512 aa15.88■□□□□ 0.13
USF1-205ENST00000473969 SLC35G1Q2M3R5 365 aa15.88■□□□□ 0.13
USF1-205ENST00000473969 CPLX2Q6PUV4 134 aaKnown RBP15.88■□□□□ 0.13
USF1-205ENST00000473969 CUL5Q93034 780 aa15.88■□□□□ 0.13
USF1-205ENST00000473969 CPLX1O14810 134 aa15.87■□□□□ 0.13
USF1-205ENST00000473969 SNAI1O95863 264 aaPredicted RBP15.87■□□□□ 0.13
USF1-205ENST00000473969 RARBP10826 455 aa15.87■□□□□ 0.13
USF1-205ENST00000473969 ADD1P35611 737 aaKnown RBP15.87■□□□□ 0.13
USF1-205ENST00000473969 PDE4DQ08499 809 aa15.87■□□□□ 0.13
USF1-205ENST00000473969 TOB2Q14106 344 aaPredicted RBP15.87■□□□□ 0.13
USF1-205ENST00000473969 ARHGEF16Q5VV41 709 aa15.87■□□□□ 0.13
USF1-205ENST00000473969 HEATR3Q7Z4Q2 680 aa15.87■□□□□ 0.13
USF1-205ENST00000473969 ANKLE1Q8NAG6 615 aa15.87■□□□□ 0.13
USF1-205ENST00000473969 TRPV1Q8NER1 839 aa15.87■□□□□ 0.13
USF1-205ENST00000473969 NSUN6Q8TEA1 469 aaKnown RBP15.87■□□□□ 0.13
USF1-205ENST00000473969 ZNF274Q96GC6 653 aaPredicted RBP15.87■□□□□ 0.13
USF1-205ENST00000473969 CRISPLD2Q9H0B8 497 aa15.87■□□□□ 0.13
USF1-205ENST00000473969 RBM27Q9P2N5 1060 aaKnown RBP15.87■□□□□ 0.13
USF1-205ENST00000473969 V9GY48 417 aaPredicted RBP15.87■□□□□ 0.13
USF1-205ENST00000473969 ZNFX1Q9P2E3 1918 aaKnown RBP15.87■□□□□ 0.13
USF1-205ENST00000473969 hCG_1642624A0A1W2PR95 340 aa15.86■□□□□ 0.13
USF1-205ENST00000473969 FARP2O94887 1054 aaPredicted RBP15.86■□□□□ 0.13
USF1-205ENST00000473969 MYCNP04198 464 aaPredicted RBP15.86■□□□□ 0.13
USF1-205ENST00000473969 PDIA3P30101 505 aaKnown RBP15.86■□□□□ 0.13
USF1-205ENST00000473969 CDC27P30260 824 aa15.86■□□□□ 0.13
USF1-205ENST00000473969 NEK4P51957 841 aa15.86■□□□□ 0.13
USF1-205ENST00000473969 EVCP57679 992 aa15.86■□□□□ 0.13
USF1-205ENST00000473969 CCT2P78371 535 aaKnown RBP15.86■□□□□ 0.13
USF1-205ENST00000473969 NOL8Q76FK4 1167 aaKnown RBP15.86■□□□□ 0.13
USF1-205ENST00000473969 ARRDC4Q8NCT1 418 aa15.86■□□□□ 0.13
USF1-205ENST00000473969 SYTL5Q8TDW5 730 aaPredicted RBP15.86■□□□□ 0.13
USF1-205ENST00000473969 TBC1D5Q92609 795 aa15.86■□□□□ 0.13
USF1-205ENST00000473969 FGD4Q96M96 766 aa15.86■□□□□ 0.13
USF1-205ENST00000473969 PURBQ96QR8 312 aaKnown RBP15.86■□□□□ 0.13
USF1-205ENST00000473969 RMDN3Q96TC7 470 aa15.86■□□□□ 0.13
USF1-205ENST00000473969 C22orf23Q9BZE7 217 aa15.86■□□□□ 0.13
USF1-205ENST00000473969 OGDHLQ9ULD0 1010 aa15.86■□□□□ 0.13
USF1-205ENST00000473969 hCG_1984214I3L0E3 225 aa15.85■□□□□ 0.13
USF1-205ENST00000473969 ZNF865P0CJ78 1059 aaPredicted RBP15.85■□□□□ 0.13
USF1-205ENST00000473969 ANO1Q5XXA6 986 aa15.85■□□□□ 0.13
USF1-205ENST00000473969 LHX8Q68G74 356 aa15.85■□□□□ 0.13
USF1-205ENST00000473969 EEPD1Q7L9B9 569 aa15.85■□□□□ 0.13
USF1-205ENST00000473969 NECAB2Q7Z6G3 386 aa15.85■□□□□ 0.13
USF1-205ENST00000473969 ZNF713Q8N859 430 aaPredicted RBP15.85■□□□□ 0.13
USF1-205ENST00000473969 SMARCC2Q8TAQ2 1214 aa15.85■□□□□ 0.13
USF1-205ENST00000473969 SHISA4Q96DD7 197 aa15.85■□□□□ 0.13
USF1-205ENST00000473969 TAAR1Q96RJ0 339 aa15.85■□□□□ 0.13
USF1-205ENST00000473969 IWS1Q96ST2 819 aa15.85■□□□□ 0.13
USF1-205ENST00000473969 LARP6Q9BRS8 491 aaKnown RBP15.85■□□□□ 0.13
USF1-205ENST00000473969 ALDH8A1Q9H2A2 487 aaPredicted RBP15.85■□□□□ 0.13
USF1-205ENST00000473969 SLKQ9H2G2 1235 aaPredicted RBP15.85■□□□□ 0.13
USF1-205ENST00000473969 SPC25Q9HBM1 224 aa15.85■□□□□ 0.13
USF1-205ENST00000473969 VTA1Q9NP79 307 aa15.85■□□□□ 0.13
USF1-205ENST00000473969 CNTNAP5Q8WYK1 1306 aa15.85■□□□□ 0.13
USF1-205ENST00000473969 HOXA13P31271 388 aaPredicted RBP15.84■□□□□ 0.13
USF1-205ENST00000473969 HSD17B4P51659 736 aa15.84■□□□□ 0.13
USF1-205ENST00000473969 STK3Q13188 491 aa15.84■□□□□ 0.13
USF1-205ENST00000473969 CCDC144BQ3MJ40 725 aa15.84■□□□□ 0.13
USF1-205ENST00000473969 RNF180Q86T96 592 aa15.84■□□□□ 0.13
USF1-205ENST00000473969 FCHSD1Q86WN1 690 aa15.84■□□□□ 0.13
USF1-205ENST00000473969 TRIM22Q8IYM9 498 aa15.84■□□□□ 0.13
USF1-205ENST00000473969 MORC4Q8TE76 937 aa15.84■□□□□ 0.13
USF1-205ENST00000473969 IL17RAQ96F46 866 aa15.84■□□□□ 0.13
USF1-205ENST00000473969 PSTPIP2Q9H939 334 aa15.84■□□□□ 0.13
USF1-205ENST00000473969 XPNPEP3Q9NQH7 507 aa15.84■□□□□ 0.13
USF1-205ENST00000473969 FAM217BQ9NTX9 383 aaPredicted RBP15.84■□□□□ 0.13
USF1-205ENST00000473969 KIAA0100Q14667 2235 aaKnown RBP15.84■□□□□ 0.13
USF1-205ENST00000473969 PLXNA1Q9UIW2 1896 aa15.83■□□□□ 0.12
USF1-205ENST00000473969 KBTBD13C9JR72 458 aa15.83■□□□□ 0.12
USF1-205ENST00000473969 EIF2AK2P19525 551 aaKnown RBP15.83■□□□□ 0.12
USF1-205ENST00000473969 NAPAP54920 295 aa15.83■□□□□ 0.12
USF1-205ENST00000473969 TNFAIP2Q03169 654 aa15.83■□□□□ 0.12
USF1-205ENST00000473969 SSRP1Q08945 709 aaKnown RBP15.83■□□□□ 0.12
USF1-205ENST00000473969 STXBP2Q15833 593 aa15.83■□□□□ 0.12
USF1-205ENST00000473969 IQSEC1Q6DN90 963 aa15.83■□□□□ 0.12
USF1-205ENST00000473969 FBXO16Q8IX29 292 aaPredicted RBP15.83■□□□□ 0.12
USF1-205ENST00000473969 GPKOWQ92917 476 aaPredicted RBP eCLIP15.83■□□□□ 0.12
USF1-205ENST00000473969 HTATIP2Q9BUP3 242 aa15.83■□□□□ 0.12
USF1-205ENST00000473969 NCOA5Q9HCD5 579 aaKnown RBP15.83■□□□□ 0.12
USF1-205ENST00000473969 NID2Q14112 1375 aa15.83■□□□□ 0.12
USF1-205ENST00000473969 HTTP42858 3142 aa15.83■□□□□ 0.12
USF1-205ENST00000473969 MYH6P13533 1939 aa15.82■□□□□ 0.12
USF1-205ENST00000473969 OPLAHO14841 1288 aa15.82■□□□□ 0.12
USF1-205ENST00000473969 PRPF3O43395 683 aaKnown RBP15.82■□□□□ 0.12
USF1-205ENST00000473969 CDKL5O76039 1030 aa15.82■□□□□ 0.12
USF1-205ENST00000473969 IFNAR1P17181 557 aa15.82■□□□□ 0.12
USF1-205ENST00000473969 AK2P54819 239 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms