RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 ARHGEF1Q92888 912 aaKnown RBP12.24□□□□□ -0.45
C9orf3-214ENST00000473778 TUBB2BQ9BVA1 445 aa12.24□□□□□ -0.45
C9orf3-214ENST00000473778 HAUS4Q9H6D7 363 aa12.24□□□□□ -0.45
C9orf3-214ENST00000473778 NHEJ1Q9H9Q4 299 aaPredicted RBP12.24□□□□□ -0.45
C9orf3-214ENST00000473778 EXOC1Q9NV70 894 aa12.24□□□□□ -0.45
C9orf3-214ENST00000473778 BTAF1O14981 1849 aa12.24□□□□□ -0.45
C9orf3-214ENST00000473778 SMCO2A6NFE2 343 aa12.23□□□□□ -0.45
C9orf3-214ENST00000473778 ERCC3P19447 782 aa12.23□□□□□ -0.45
C9orf3-214ENST00000473778 TRIM21P19474 475 aaKnown RBP12.23□□□□□ -0.45
C9orf3-214ENST00000473778 CCNE1P24864 410 aa12.23□□□□□ -0.45
C9orf3-214ENST00000473778 GNAQP50148 359 aa12.23□□□□□ -0.45
C9orf3-214ENST00000473778 PPP4CP60510 307 aa12.23□□□□□ -0.45
C9orf3-214ENST00000473778 TBC1D8BQ0IIM8 1120 aa12.23□□□□□ -0.45
C9orf3-214ENST00000473778 TBCKQ8TEA7 893 aa12.23□□□□□ -0.45
C9orf3-214ENST00000473778 SMCR8Q8TEV9 937 aaPredicted RBP12.23□□□□□ -0.45
C9orf3-214ENST00000473778 CEP95Q96GE4 821 aa12.23□□□□□ -0.45
C9orf3-214ENST00000473778 DHTKD1Q96HY7 919 aaPredicted RBP12.23□□□□□ -0.45
C9orf3-214ENST00000473778 CAPZA3Q96KX2 299 aa12.23□□□□□ -0.45
C9orf3-214ENST00000473778 TRERF1Q96PN7 1200 aa12.23□□□□□ -0.45
C9orf3-214ENST00000473778 VAT1LQ9HCJ6 419 aa12.23□□□□□ -0.45
C9orf3-214ENST00000473778 BLOC1S4Q9NUP1 217 aa12.23□□□□□ -0.45
C9orf3-214ENST00000473778 VPS18Q9P253 973 aa12.23□□□□□ -0.45
C9orf3-214ENST00000473778 ZPR1O75312 459 aa12.23□□□□□ -0.45
C9orf3-214ENST00000473778 ZMYND10O75800 440 aa12.23□□□□□ -0.45
C9orf3-214ENST00000473778 MYL1P05976 194 aa12.23□□□□□ -0.45
C9orf3-214ENST00000473778 CDK8P49336 464 aa12.23□□□□□ -0.45
C9orf3-214ENST00000473778 ASIC1P78348 528 aa12.23□□□□□ -0.45
C9orf3-214ENST00000473778 PAPD7Q5XG87 772 aaKnown RBP12.23□□□□□ -0.45
C9orf3-214ENST00000473778 SPTY2D1Q68D10 685 aaPredicted RBP12.23□□□□□ -0.45
C9orf3-214ENST00000473778 GLIS3Q8NEA6 775 aa12.23□□□□□ -0.45
C9orf3-214ENST00000473778 PIGSQ96S52 555 aa12.23□□□□□ -0.45
C9orf3-214ENST00000473778 EYA3Q99504 573 aa12.23□□□□□ -0.45
C9orf3-214ENST00000473778 SPZ1Q9BXG8 430 aa12.23□□□□□ -0.45
C9orf3-214ENST00000473778 UBA5Q9GZZ9 404 aa12.23□□□□□ -0.45
C9orf3-214ENST00000473778 SLC39A2Q9NP94 309 aa12.23□□□□□ -0.45
C9orf3-214ENST00000473778 BIN2Q9UBW5 565 aaPredicted RBP12.23□□□□□ -0.45
C9orf3-214ENST00000473778 FAN1Q9Y2M0 1017 aa12.23□□□□□ -0.45
C9orf3-214ENST00000473778 LAD1O00515 517 aa12.22□□□□□ -0.45
C9orf3-214ENST00000473778 SLC37A4O43826 429 aa12.22□□□□□ -0.45
C9orf3-214ENST00000473778 PHACTR2O75167 634 aa12.22□□□□□ -0.45
C9orf3-214ENST00000473778 MYBL2P10244 700 aa12.22□□□□□ -0.45
C9orf3-214ENST00000473778 BTDP43251 543 aa12.22□□□□□ -0.45
C9orf3-214ENST00000473778 GALNT17Q6IS24 598 aa12.22□□□□□ -0.45
C9orf3-214ENST00000473778 WDR93Q6P2C0 686 aa12.22□□□□□ -0.45
C9orf3-214ENST00000473778 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.22□□□□□ -0.45
C9orf3-214ENST00000473778 ZSCAN29Q8IWY8 852 aaPredicted RBP12.22□□□□□ -0.45
C9orf3-214ENST00000473778 WDR66Q8TBY9 1149 aa12.22□□□□□ -0.45
C9orf3-214ENST00000473778 C7orf25Q9BPX7 421 aa12.22□□□□□ -0.45
C9orf3-214ENST00000473778 HINFPQ9BQA5 517 aa12.22□□□□□ -0.45
C9orf3-214ENST00000473778 NUDT12Q9BQG2 462 aa12.22□□□□□ -0.45
C9orf3-214ENST00000473778 USP17L5A8MUK1 530 aa12.22□□□□□ -0.45
C9orf3-214ENST00000473778 POTEB2H3BUK9 544 aa12.22□□□□□ -0.45
C9orf3-214ENST00000473778 LMAN1P49257 510 aa12.22□□□□□ -0.45
C9orf3-214ENST00000473778 USP14P54578 494 aa12.22□□□□□ -0.45
C9orf3-214ENST00000473778 GRB10Q13322 594 aa12.22□□□□□ -0.45
C9orf3-214ENST00000473778 MKRN4PQ13434 485 aaPredicted RBP12.22□□□□□ -0.45
C9orf3-214ENST00000473778 STIM1Q13586 685 aa12.22□□□□□ -0.45
C9orf3-214ENST00000473778 NONOQ15233 471 aaKnown RBP eCLIP12.22□□□□□ -0.45
C9orf3-214ENST00000473778 TMED8Q6PL24 325 aaPredicted RBP12.22□□□□□ -0.45
C9orf3-214ENST00000473778 C16orf86Q6ZW13 317 aa12.22□□□□□ -0.45
C9orf3-214ENST00000473778 NEK8Q86SG6 692 aa12.22□□□□□ -0.45
C9orf3-214ENST00000473778 CLEC10AQ8IUN9 316 aa12.22□□□□□ -0.45
C9orf3-214ENST00000473778 GSPT2Q8IYD1 628 aaKnown RBP12.22□□□□□ -0.45
C9orf3-214ENST00000473778 JAKMIP2Q96AA8 810 aa12.22□□□□□ -0.45
C9orf3-214ENST00000473778 GDAP1L1Q96MZ0 367 aa12.22□□□□□ -0.45
C9orf3-214ENST00000473778 PURBQ96QR8 312 aaKnown RBP12.22□□□□□ -0.45
C9orf3-214ENST00000473778 MAGEC2Q9UBF1 373 aaPredicted RBP12.22□□□□□ -0.45
C9orf3-214ENST00000473778 FEZ2Q9UHY8 353 aaPredicted RBP12.22□□□□□ -0.45
C9orf3-214ENST00000473778 SAR1BQ9Y6B6 198 aa12.22□□□□□ -0.45
C9orf3-214ENST00000473778 ZC3H4Q9UPT8 1303 aaKnown RBP12.22□□□□□ -0.45
C9orf3-214ENST00000473778 MACROD2A1Z1Q3 448 aa12.21□□□□□ -0.45
C9orf3-214ENST00000473778 MYMKA6NI61 221 aa12.21□□□□□ -0.45
C9orf3-214ENST00000473778 TXKP42681 527 aa12.21□□□□□ -0.45
C9orf3-214ENST00000473778 KCNK18Q7Z418 384 aa12.21□□□□□ -0.45
C9orf3-214ENST00000473778 EXOC4Q96A65 974 aa12.21□□□□□ -0.45
C9orf3-214ENST00000473778 AK8Q96MA6 479 aa12.21□□□□□ -0.45
C9orf3-214ENST00000473778 PNMA5Q96PV4 448 aa12.21□□□□□ -0.45
C9orf3-214ENST00000473778 NOC4LQ9BVI4 516 aaKnown RBP12.21□□□□□ -0.45
C9orf3-214ENST00000473778 TAF1LQ8IZX4 1826 aa12.21□□□□□ -0.46
C9orf3-214ENST00000473778 POTEMA6NI47 508 aa12.21□□□□□ -0.46
C9orf3-214ENST00000473778 TDP2O95551 362 aa12.21□□□□□ -0.46
C9orf3-214ENST00000473778 RHBDL3P58872 404 aa12.21□□□□□ -0.46
C9orf3-214ENST00000473778 ZBED6P86452 979 aa12.21□□□□□ -0.46
C9orf3-214ENST00000473778 ATP2B2Q01814 1243 aa12.21□□□□□ -0.46
C9orf3-214ENST00000473778 GRAPQ13588 217 aa12.21□□□□□ -0.46
C9orf3-214ENST00000473778 ZNF662Q6ZS27 426 aa12.21□□□□□ -0.46
C9orf3-214ENST00000473778 KRT25Q7Z3Z0 450 aa12.21□□□□□ -0.46
C9orf3-214ENST00000473778 KIAA1328Q86T90 577 aa12.21□□□□□ -0.46
C9orf3-214ENST00000473778 GRAPLQ8TC17 118 aaPredicted RBP12.21□□□□□ -0.46
C9orf3-214ENST00000473778 GJA10Q969M2 543 aa12.21□□□□□ -0.46
C9orf3-214ENST00000473778 MTMR9Q96QG7 549 aa12.21□□□□□ -0.46
C9orf3-214ENST00000473778 ARHGAP20Q9P2F6 1191 aa12.21□□□□□ -0.46
C9orf3-214ENST00000473778 CAPN6Q9Y6Q1 641 aa12.21□□□□□ -0.46
C9orf3-214ENST00000473778 FRMPD2Q68DX3 1309 aaPredicted RBP12.21□□□□□ -0.46
C9orf3-214ENST00000473778 EIF3CLB5ME19 914 aaKnown RBP12.2□□□□□ -0.46
C9orf3-214ENST00000473778 RGL2O15211 777 aa12.2□□□□□ -0.46
C9orf3-214ENST00000473778 ERLIN1O75477 346 aa12.2□□□□□ -0.46
C9orf3-214ENST00000473778 BAG3O95817 575 aa12.2□□□□□ -0.46
C9orf3-214ENST00000473778 MTIF2P46199 727 aaKnown RBP12.2□□□□□ -0.46
C9orf3-214ENST00000473778 GPSM2P81274 684 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms