RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 SLC39A14Q15043 492 aa16.82■□□□□ 0.28
LMNA-213ENST00000473598 SH3D19Q5HYK7 790 aa16.82■□□□□ 0.28
LMNA-213ENST00000473598 PRPF38AQ8NAV1 312 aaKnown RBP16.82■□□□□ 0.28
LMNA-213ENST00000473598 KCNG4Q8TDN1 519 aa16.82■□□□□ 0.28
LMNA-213ENST00000473598 SLC10A4Q96EP9 437 aa16.82■□□□□ 0.28
LMNA-213ENST00000473598 PGBD1Q96JS3 809 aa16.82■□□□□ 0.28
LMNA-213ENST00000473598 SLF1Q9BQI6 1058 aa16.82■□□□□ 0.28
LMNA-213ENST00000473598 TANGO6Q9C0B7 1094 aa16.82■□□□□ 0.28
LMNA-213ENST00000473598 TSPY26PQ9H489 355 aa16.82■□□□□ 0.28
LMNA-213ENST00000473598 RPAP3Q9H6T3 665 aaPredicted RBP16.82■□□□□ 0.28
LMNA-213ENST00000473598 YY1AP1Q9H869 796 aa16.82■□□□□ 0.28
LMNA-213ENST00000473598 SPTLC3Q9NUV7 552 aa16.82■□□□□ 0.28
LMNA-213ENST00000473598 CCDC194A0A1B0GVG4 234 aa16.81■□□□□ 0.28
LMNA-213ENST00000473598 SPTLC2O15270 562 aa16.81■□□□□ 0.28
LMNA-213ENST00000473598 PPATQ06203 517 aa16.81■□□□□ 0.28
LMNA-213ENST00000473598 PTPAQ15257 358 aa16.81■□□□□ 0.28
LMNA-213ENST00000473598 REXO1Q8N1G1 1221 aaKnown RBP16.81■□□□□ 0.28
LMNA-213ENST00000473598 CALCOCO1Q9P1Z2 691 aa16.81■□□□□ 0.28
LMNA-213ENST00000473598 PCDHB6Q9Y5E3 794 aa16.81■□□□□ 0.28
LMNA-213ENST00000473598 LOC285556D6RIA3 1793 aa16.81■□□□□ 0.28
LMNA-213ENST00000473598 PTMAP06454 111 aaKnown RBP16.8■□□□□ 0.28
LMNA-213ENST00000473598 SLC10A3P09131 477 aa16.8■□□□□ 0.28
LMNA-213ENST00000473598 TRAPPC10P48553 1259 aa16.8■□□□□ 0.28
LMNA-213ENST00000473598 TRAF1Q13077 416 aa16.8■□□□□ 0.28
LMNA-213ENST00000473598 SYCP1Q15431 976 aa16.8■□□□□ 0.28
LMNA-213ENST00000473598 KRT25Q7Z3Z0 450 aa16.8■□□□□ 0.28
LMNA-213ENST00000473598 ERO1BQ86YB8 467 aa16.8■□□□□ 0.28
LMNA-213ENST00000473598 CREBRFQ8IUR6 639 aa16.8■□□□□ 0.28
LMNA-213ENST00000473598 CUL5Q93034 780 aa16.8■□□□□ 0.28
LMNA-213ENST00000473598 OPTNQ96CV9 577 aa16.8■□□□□ 0.28
LMNA-213ENST00000473598 OTUD5Q96G74 571 aa16.8■□□□□ 0.28
LMNA-213ENST00000473598 TMOD4Q9NZQ9 345 aa16.8■□□□□ 0.28
LMNA-213ENST00000473598 COL11A1P12107 1806 aaPredicted RBP16.8■□□□□ 0.28
LMNA-213ENST00000473598 GOLGA6L4A6NEF3 574 aa16.8■□□□□ 0.28
LMNA-213ENST00000473598 SPDYE5A6NIY4 337 aa16.8■□□□□ 0.28
LMNA-213ENST00000473598 FLOT1O75955 427 aa16.8■□□□□ 0.28
LMNA-213ENST00000473598 SLFN14P0C7P3 912 aa16.8■□□□□ 0.28
LMNA-213ENST00000473598 MRPL12P52815 198 aaKnown RBP16.8■□□□□ 0.28
LMNA-213ENST00000473598 NOLC1Q14978 699 aaKnown RBP eCLIP16.8■□□□□ 0.28
LMNA-213ENST00000473598 USH1GQ495M9 461 aa16.8■□□□□ 0.28
LMNA-213ENST00000473598 TPRNQ4KMQ1 711 aa16.8■□□□□ 0.28
LMNA-213ENST00000473598 GLT8D2Q9H1C3 349 aa16.8■□□□□ 0.28
LMNA-213ENST00000473598 PSTPIP2Q9H939 334 aa16.8■□□□□ 0.28
LMNA-213ENST00000473598 BIN2Q9UBW5 565 aaPredicted RBP16.8■□□□□ 0.28
LMNA-213ENST00000473598 PPP6R2O75170 966 aa16.79■□□□□ 0.28
LMNA-213ENST00000473598 ATP2B1P20020 1258 aa16.79■□□□□ 0.28
LMNA-213ENST00000473598 ME1P48163 572 aa16.79■□□□□ 0.28
LMNA-213ENST00000473598 CLK2P49760 499 aaKnown RBP16.79■□□□□ 0.28
LMNA-213ENST00000473598 CCDC174Q6PII3 467 aa16.79■□□□□ 0.28
LMNA-213ENST00000473598 SAMD1Q6SPF0 538 aaPredicted RBP16.79■□□□□ 0.28
LMNA-213ENST00000473598 TSC1Q92574 1164 aa16.79■□□□□ 0.28
LMNA-213ENST00000473598 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.79■□□□□ 0.28
LMNA-213ENST00000473598 PPP1R9AQ9ULJ8 1098 aa16.79■□□□□ 0.28
LMNA-213ENST00000473598 PCDHA7Q9UN72 937 aa16.79■□□□□ 0.28
LMNA-213ENST00000473598 CEP131Q9UPN4 1083 aa16.79■□□□□ 0.28
LMNA-213ENST00000473598 TTC38Q5R3I4 469 aa16.79■□□□□ 0.28
LMNA-213ENST00000473598 WNK4Q96J92 1243 aa16.79■□□□□ 0.28
LMNA-213ENST00000473598 MYH7BA7E2Y1 1941 aa16.79■□□□□ 0.28
LMNA-213ENST00000473598 UNCXA6NJT0 531 aa16.78■□□□□ 0.28
LMNA-213ENST00000473598 WNT7AO00755 349 aa16.78■□□□□ 0.28
LMNA-213ENST00000473598 IRF6O14896 467 aa16.78■□□□□ 0.28
LMNA-213ENST00000473598 CTIFO43310 598 aaKnown RBP16.78■□□□□ 0.28
LMNA-213ENST00000473598 NONOQ15233 471 aaKnown RBP eCLIP16.78■□□□□ 0.28
LMNA-213ENST00000473598 JAKMIP3Q5VZ66 844 aa16.78■□□□□ 0.28
LMNA-213ENST00000473598 SPRYD7Q5W111 196 aa16.78■□□□□ 0.28
LMNA-213ENST00000473598 JMYQ8N9B5 988 aa16.78■□□□□ 0.28
LMNA-213ENST00000473598 TMEM260Q9NX78 707 aa16.78■□□□□ 0.28
LMNA-213ENST00000473598 INF2Q27J81 1249 aa16.77■□□□□ 0.28
LMNA-213ENST00000473598 ADALQ6DHV7 355 aa16.77■□□□□ 0.28
LMNA-213ENST00000473598 CCDC102AQ96A19 550 aa16.77■□□□□ 0.28
LMNA-213ENST00000473598 CXCL11O14625 94 aa16.77■□□□□ 0.27
LMNA-213ENST00000473598 ICAM1P05362 532 aa16.77■□□□□ 0.27
LMNA-213ENST00000473598 FDX1P10109 184 aa16.77■□□□□ 0.27
LMNA-213ENST00000473598 MARCKSP29966 332 aaPredicted RBP16.77■□□□□ 0.27
LMNA-213ENST00000473598 PPIL2Q13356 520 aa16.77■□□□□ 0.27
LMNA-213ENST00000473598 UBE2SQ16763 222 aa16.77■□□□□ 0.27
LMNA-213ENST00000473598 CATSPERGQ6ZRH7 1159 aa16.77■□□□□ 0.27
LMNA-213ENST00000473598 SLC38A10Q9HBR0 1119 aa16.77■□□□□ 0.27
LMNA-213ENST00000473598 RNF216Q9NWF9 866 aaPredicted RBP16.77■□□□□ 0.27
LMNA-213ENST00000473598 MORC2Q9Y6X9 1032 aaPredicted RBP16.77■□□□□ 0.27
LMNA-213ENST00000473598 ZNF536O15090 1300 aa16.76■□□□□ 0.27
LMNA-213ENST00000473598 A0A0G2JLL6 359 aaPredicted RBP16.76■□□□□ 0.27
LMNA-213ENST00000473598 USP17L15C9J2P7 530 aa16.76■□□□□ 0.27
LMNA-213ENST00000473598 USP17L13C9JLJ4 530 aa16.76■□□□□ 0.27
LMNA-213ENST00000473598 USP17L11C9JVI0 530 aa16.76■□□□□ 0.27
LMNA-213ENST00000473598 USP17L18D6R9N7 530 aa16.76■□□□□ 0.27
LMNA-213ENST00000473598 USP17L22D6RA61 530 aa16.76■□□□□ 0.27
LMNA-213ENST00000473598 USP17L17D6RBQ6 530 aa16.76■□□□□ 0.27
LMNA-213ENST00000473598 USP17L19D6RCP7 530 aa16.76■□□□□ 0.27
LMNA-213ENST00000473598 USP17L20D6RJB6 530 aa16.76■□□□□ 0.27
LMNA-213ENST00000473598 OPLAHO14841 1288 aa16.76■□□□□ 0.27
LMNA-213ENST00000473598 BMP15O95972 392 aa16.76■□□□□ 0.27
LMNA-213ENST00000473598 TAL1P17542 331 aaPredicted RBP16.76■□□□□ 0.27
LMNA-213ENST00000473598 USP17L24Q0WX57 530 aa16.76■□□□□ 0.27
LMNA-213ENST00000473598 ZNF174Q15697 407 aa16.76■□□□□ 0.27
LMNA-213ENST00000473598 PRRT2Q7Z6L0 340 aaPredicted RBP16.76■□□□□ 0.27
LMNA-213ENST00000473598 RNF214Q8ND24 703 aa16.76■□□□□ 0.27
LMNA-213ENST00000473598 KCNH4Q9UQ05 1017 aa16.76■□□□□ 0.27
LMNA-213ENST00000473598 ABCB11O95342 1321 aa16.76■□□□□ 0.27
LMNA-213ENST00000473598 RBBP6Q7Z6E9 1792 aaKnown RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms