RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 ZBTB5O15062 677 aa15.23■□□□□ 0.03
TPM3-216ENST00000473036 DHX16O60231 1041 aaKnown RBP15.23■□□□□ 0.03
TPM3-216ENST00000473036 PSMA5P28066 241 aa15.23■□□□□ 0.03
TPM3-216ENST00000473036 EVCP57679 992 aa15.23■□□□□ 0.03
TPM3-216ENST00000473036 ANAPC15P60006 121 aa15.23■□□□□ 0.03
TPM3-216ENST00000473036 BAATQ14032 418 aaPredicted RBP15.23■□□□□ 0.03
TPM3-216ENST00000473036 HOMER1Q86YM7 354 aa15.23■□□□□ 0.03
TPM3-216ENST00000473036 CTCFLQ8NI51 663 aaPredicted RBP15.23■□□□□ 0.03
TPM3-216ENST00000473036 C11orf49Q9H6J7 331 aa15.23■□□□□ 0.03
TPM3-216ENST00000473036 COL20A1Q9P218 1284 aa15.23■□□□□ 0.03
TPM3-216ENST00000473036 DIS3Q9Y2L1 958 aaKnown RBP15.23■□□□□ 0.03
TPM3-216ENST00000473036 LRRC37A2A6NM11 1700 aa15.23■□□□□ 0.03
TPM3-216ENST00000473036 NID2Q14112 1375 aa15.23■□□□□ 0.03
TPM3-216ENST00000473036 CNTNAP5Q8WYK1 1306 aa15.22■□□□□ 0.03
TPM3-216ENST00000473036 ZBTB43O43298 467 aa15.22■□□□□ 0.03
TPM3-216ENST00000473036 SNAI1O95863 264 aaPredicted RBP15.22■□□□□ 0.03
TPM3-216ENST00000473036 CYBAP13498 195 aa15.22■□□□□ 0.03
TPM3-216ENST00000473036 SMARCA1P28370 1054 aa15.22■□□□□ 0.03
TPM3-216ENST00000473036 ADD1P35611 737 aaKnown RBP15.22■□□□□ 0.03
TPM3-216ENST00000473036 NSMFQ6X4W1 530 aa15.22■□□□□ 0.03
TPM3-216ENST00000473036 FBXO11Q86XK2 927 aa15.22■□□□□ 0.03
TPM3-216ENST00000473036 C7orf61Q8IZ16 206 aa15.22■□□□□ 0.03
TPM3-216ENST00000473036 CCDC82Q8N4S0 544 aa15.22■□□□□ 0.03
TPM3-216ENST00000473036 DIS3LQ8TF46 1054 aaKnown RBP15.22■□□□□ 0.03
TPM3-216ENST00000473036 DDX11Q96FC9 970 aa15.22■□□□□ 0.03
TPM3-216ENST00000473036 TINF2Q9BSI4 451 aa15.22■□□□□ 0.03
TPM3-216ENST00000473036 KATNBL1Q9H079 304 aa15.22■□□□□ 0.03
TPM3-216ENST00000473036 CYP46A1Q9Y6A2 500 aa15.22■□□□□ 0.03
TPM3-216ENST00000473036 UNC80Q8N2C7 3258 aa15.21■□□□□ 0.03
TPM3-216ENST00000473036 PNMA6FA0A0J9YX94 578 aa15.21■□□□□ 0.03
TPM3-216ENST00000473036 CALM1P0DP23 149 aa15.21■□□□□ 0.03
TPM3-216ENST00000473036 CALM2P0DP24 149 aa15.21■□□□□ 0.03
TPM3-216ENST00000473036 CALM3P0DP25 149 aa15.21■□□□□ 0.03
TPM3-216ENST00000473036 PDIA3P30101 505 aaKnown RBP15.21■□□□□ 0.03
TPM3-216ENST00000473036 KIF5BP33176 963 aa15.21■□□□□ 0.03
TPM3-216ENST00000473036 RPS6P62753 249 aaKnown RBP15.21■□□□□ 0.03
TPM3-216ENST00000473036 RTN1Q16799 776 aa15.21■□□□□ 0.03
TPM3-216ENST00000473036 LHX8Q68G74 356 aa15.21■□□□□ 0.03
TPM3-216ENST00000473036 MAMDC4Q6UXC1 1216 aa15.21■□□□□ 0.03
TPM3-216ENST00000473036 AMNQ9BXJ7 453 aa15.21■□□□□ 0.03
TPM3-216ENST00000473036 UPF2Q9HAU5 1272 aaKnown RBP15.21■□□□□ 0.03
TPM3-216ENST00000473036 ALPK3Q96L96 1907 aa15.21■□□□□ 0.02
TPM3-216ENST00000473036 ABCB11O95342 1321 aa15.2■□□□□ 0.02
TPM3-216ENST00000473036 GOLGA8AA7E2F4 631 aa15.2■□□□□ 0.02
TPM3-216ENST00000473036 GOLGA8BA8MQT2 603 aa15.2■□□□□ 0.02
TPM3-216ENST00000473036 POTEB2H3BUK9 544 aa15.2■□□□□ 0.02
TPM3-216ENST00000473036 ADCY6O43306 1168 aa15.2■□□□□ 0.02
TPM3-216ENST00000473036 ZNF865P0CJ78 1059 aaPredicted RBP15.2■□□□□ 0.02
TPM3-216ENST00000473036 NTRK3Q16288 839 aa15.2■□□□□ 0.02
TPM3-216ENST00000473036 FAM109BQ6ICB4 259 aaPredicted RBP15.2■□□□□ 0.02
TPM3-216ENST00000473036 ZNF467Q7Z7K2 595 aaPredicted RBP15.2■□□□□ 0.02
TPM3-216ENST00000473036 LZTS2Q9BRK4 669 aa15.2■□□□□ 0.02
TPM3-216ENST00000473036 PDRG1Q9NUG6 133 aa15.2■□□□□ 0.02
TPM3-216ENST00000473036 MTMR10Q9NXD2 777 aa15.2■□□□□ 0.02
TPM3-216ENST00000473036 PCDHA1Q9Y5I3 950 aa15.2■□□□□ 0.02
TPM3-216ENST00000473036 PFASO15067 1338 aa15.19■□□□□ 0.02
TPM3-216ENST00000473036 DTNBO60941 627 aa15.19■□□□□ 0.02
TPM3-216ENST00000473036 COL6A1P12109 1028 aa15.19■□□□□ 0.02
TPM3-216ENST00000473036 CALML3P27482 149 aa15.19■□□□□ 0.02
TPM3-216ENST00000473036 MAGEA10P43363 369 aaPredicted RBP15.19■□□□□ 0.02
TPM3-216ENST00000473036 RCAN1P53805 252 aa15.19■□□□□ 0.02
TPM3-216ENST00000473036 GHRHRQ02643 423 aa15.19■□□□□ 0.02
TPM3-216ENST00000473036 TMEM63BQ5T3F8 832 aa15.19■□□□□ 0.02
TPM3-216ENST00000473036 MFSD14CQ5VZR4 134 aa15.19■□□□□ 0.02
TPM3-216ENST00000473036 TYW1BQ6NUM6 668 aa15.19■□□□□ 0.02
TPM3-216ENST00000473036 RNF207Q6ZRF8 634 aa15.19■□□□□ 0.02
TPM3-216ENST00000473036 RGS22Q8NE09 1264 aa15.19■□□□□ 0.02
TPM3-216ENST00000473036 SYTL5Q8TDW5 730 aaPredicted RBP15.19■□□□□ 0.02
TPM3-216ENST00000473036 UBE2OQ9C0C9 1292 aaKnown RBP15.19■□□□□ 0.02
TPM3-216ENST00000473036 ALDH8A1Q9H2A2 487 aaPredicted RBP15.19■□□□□ 0.02
TPM3-216ENST00000473036 NCOA5Q9HCD5 579 aaKnown RBP15.19■□□□□ 0.02
TPM3-216ENST00000473036 TPCN1Q9ULQ1 816 aa15.19■□□□□ 0.02
TPM3-216ENST00000473036 SYNGAP1Q96PV0 1343 aa15.18■□□□□ 0.02
TPM3-216ENST00000473036 PTPDC1A2A3K4 754 aa15.18■□□□□ 0.02
TPM3-216ENST00000473036 PPFIA3O75145 1194 aa15.18■□□□□ 0.02
TPM3-216ENST00000473036 PTGS1P23219 599 aa15.18■□□□□ 0.02
TPM3-216ENST00000473036 GNAQP50148 359 aa15.18■□□□□ 0.02
TPM3-216ENST00000473036 METAP2P50579 478 aaKnown RBP eCLIP15.18■□□□□ 0.02
TPM3-216ENST00000473036 AK2P54819 239 aa15.18■□□□□ 0.02
TPM3-216ENST00000473036 CCT2P78371 535 aaKnown RBP15.18■□□□□ 0.02
TPM3-216ENST00000473036 FGD1P98174 961 aa15.18■□□□□ 0.02
TPM3-216ENST00000473036 ANO1Q5XXA6 986 aa15.18■□□□□ 0.02
TPM3-216ENST00000473036 SYNE3Q6ZMZ3 975 aa15.18■□□□□ 0.02
TPM3-216ENST00000473036 ARMCX2Q7L311 632 aa15.18■□□□□ 0.02
TPM3-216ENST00000473036 MORC4Q8TE76 937 aa15.18■□□□□ 0.02
TPM3-216ENST00000473036 LENG1Q96BZ8 264 aaPredicted RBP15.18■□□□□ 0.02
TPM3-216ENST00000473036 TAAR1Q96RJ0 339 aa15.18■□□□□ 0.02
TPM3-216ENST00000473036 RBM28Q9NW13 759 aaKnown RBP15.18■□□□□ 0.02
TPM3-216ENST00000473036 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.18■□□□□ 0.02
TPM3-216ENST00000473036 SLC5A4Q9NY91 659 aa15.18■□□□□ 0.02
TPM3-216ENST00000473036 ZMYND8Q9ULU4 1186 aaPredicted RBP15.18■□□□□ 0.02
TPM3-216ENST00000473036 NAP1L2Q9ULW6 460 aaPredicted RBP15.18■□□□□ 0.02
TPM3-216ENST00000473036 MRPL11Q9Y3B7 192 aaKnown RBP15.18■□□□□ 0.02
TPM3-216ENST00000473036 ADAMTS3O15072 1205 aa15.17■□□□□ 0.02
TPM3-216ENST00000473036 LARGE1O95461 756 aa15.17■□□□□ 0.02
TPM3-216ENST00000473036 RBM25P49756 843 aaKnown RBP15.17■□□□□ 0.02
TPM3-216ENST00000473036 ALDH5A1P51649 535 aaPredicted RBP15.17■□□□□ 0.02
TPM3-216ENST00000473036 HSD17B4P51659 736 aa15.17■□□□□ 0.02
TPM3-216ENST00000473036 MSL3Q8N5Y2 521 aaKnown RBP15.17■□□□□ 0.02
TPM3-216ENST00000473036 GPKOWQ92917 476 aaPredicted RBP eCLIP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms