RNA–Protein interactions for RNA: ENST00000472977.6

CTSS-203, Transcript of cathepsin S, humanhuman

TSL 5

Gene CTSS, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-203ENST00000472977 MEIS3P2A8K0S8 358 aa6.67□□□□□ -1.34
CTSS-203ENST00000472977 SMARCA5O60264 1052 aaPredicted RBP6.67□□□□□ -1.34
CTSS-203ENST00000472977 IGSF3O75054 1194 aa6.67□□□□□ -1.34
CTSS-203ENST00000472977 SLC9A5Q14940 896 aa6.67□□□□□ -1.34
CTSS-203ENST00000472977 LIMS2Q7Z4I7 341 aa6.67□□□□□ -1.34
CTSS-203ENST00000472977 USP48Q86UV5 1035 aa6.67□□□□□ -1.34
CTSS-203ENST00000472977 CABP7Q86V35 215 aa6.67□□□□□ -1.34
CTSS-203ENST00000472977 FAM161BQ96MY7 647 aa6.67□□□□□ -1.34
CTSS-203ENST00000472977 VPS11Q9H270 941 aa6.67□□□□□ -1.34
CTSS-203ENST00000472977 KBTBD4Q9NVX7 518 aa6.67□□□□□ -1.34
CTSS-203ENST00000472977 SUCOQ9UBS9 1254 aaKnown RBP6.67□□□□□ -1.34
CTSS-203ENST00000472977 SUPT16HQ9Y5B9 1047 aaKnown RBP6.67□□□□□ -1.34
CTSS-203ENST00000472977 ZNF536O15090 1300 aa6.67□□□□□ -1.34
CTSS-203ENST00000472977 GREM1O60565 184 aa6.66□□□□□ -1.34
CTSS-203ENST00000472977 TBC1D8O95759 1140 aa6.66□□□□□ -1.34
CTSS-203ENST00000472977 CRKP46108 304 aa6.66□□□□□ -1.34
CTSS-203ENST00000472977 FAM124AQ86V42 546 aa6.66□□□□□ -1.34
CTSS-203ENST00000472977 PEX11GQ96HA9 241 aa6.66□□□□□ -1.34
CTSS-203ENST00000472977 MROH6A6NGR9 719 aa6.65□□□□□ -1.34
CTSS-203ENST00000472977 C9IYK1 514 aa6.65□□□□□ -1.34
CTSS-203ENST00000472977 CYP2C8P10632 490 aa6.65□□□□□ -1.34
CTSS-203ENST00000472977 RPL13P26373 211 aaKnown RBP6.65□□□□□ -1.34
CTSS-203ENST00000472977 THBS2P35442 1172 aa6.65□□□□□ -1.34
CTSS-203ENST00000472977 CLCQ05315 142 aa6.65□□□□□ -1.34
CTSS-203ENST00000472977 LRRFIP1Q32MZ4 808 aaKnown RBP6.65□□□□□ -1.34
CTSS-203ENST00000472977 CCDC144CPQ8IYA2 1237 aa6.65□□□□□ -1.34
CTSS-203ENST00000472977 REXO1Q8N1G1 1221 aaKnown RBP6.65□□□□□ -1.34
CTSS-203ENST00000472977 NETO2Q8NC67 525 aa6.65□□□□□ -1.34
CTSS-203ENST00000472977 DDX11Q96FC9 970 aa6.65□□□□□ -1.34
CTSS-203ENST00000472977 CDK5RAP1Q96SZ6 601 aaKnown RBP6.65□□□□□ -1.34
CTSS-203ENST00000472977 SLC9A7Q96T83 725 aa6.65□□□□□ -1.34
CTSS-203ENST00000472977 FBLN5Q9UBX5 448 aa6.65□□□□□ -1.34
CTSS-203ENST00000472977 NUDT5Q9UKK9 219 aa6.65□□□□□ -1.34
CTSS-203ENST00000472977 ANKRD33BA6NCL7 494 aa6.64□□□□□ -1.35
CTSS-203ENST00000472977 C8BP07358 591 aa6.64□□□□□ -1.35
CTSS-203ENST00000472977 NOP2P46087 812 aaKnown RBP6.64□□□□□ -1.35
CTSS-203ENST00000472977 XPCQ01831 940 aaPredicted RBP6.64□□□□□ -1.35
CTSS-203ENST00000472977 KCNA1Q09470 495 aa6.64□□□□□ -1.35
CTSS-203ENST00000472977 ICAM4Q14773 271 aa6.64□□□□□ -1.35
CTSS-203ENST00000472977 ERMP1Q7Z2K6 904 aa6.64□□□□□ -1.35
CTSS-203ENST00000472977 RGS22Q8NE09 1264 aa6.64□□□□□ -1.35
CTSS-203ENST00000472977 DHRS1Q96LJ7 313 aa6.64□□□□□ -1.35
CTSS-203ENST00000472977 FCRL3Q96P31 734 aaPredicted RBP6.64□□□□□ -1.35
CTSS-203ENST00000472977 GORASP1Q9BQQ3 440 aa6.64□□□□□ -1.35
CTSS-203ENST00000472977 KLC2Q9H0B6 622 aa6.64□□□□□ -1.35
CTSS-203ENST00000472977 ZNF445P59923 1031 aa6.63□□□□□ -1.35
CTSS-203ENST00000472977 KLF10Q13118 480 aa6.63□□□□□ -1.35
CTSS-203ENST00000472977 C9orf131Q5VYM1 1079 aa6.63□□□□□ -1.35
CTSS-203ENST00000472977 GK5Q6ZS86 529 aa6.63□□□□□ -1.35
CTSS-203ENST00000472977 ZNF428Q96B54 188 aa6.63□□□□□ -1.35
CTSS-203ENST00000472977 CD248Q9HCU0 757 aa6.63□□□□□ -1.35
CTSS-203ENST00000472977 FHOD1Q9Y613 1164 aa6.63□□□□□ -1.35
CTSS-203ENST00000472977 ZBTB7AO95365 584 aa6.62□□□□□ -1.35
CTSS-203ENST00000472977 IFNGR1P15260 489 aa6.62□□□□□ -1.35
CTSS-203ENST00000472977 EIF4A3P38919 411 aaKnown RBP6.62□□□□□ -1.35
CTSS-203ENST00000472977 NOL9Q5SY16 702 aaKnown RBP6.62□□□□□ -1.35
CTSS-203ENST00000472977 FIBCD1Q8N539 461 aa6.62□□□□□ -1.35
CTSS-203ENST00000472977 LZTR1Q8N653 840 aa6.62□□□□□ -1.35
CTSS-203ENST00000472977 C11orf84Q9BUA3 381 aaPredicted RBP6.62□□□□□ -1.35
CTSS-203ENST00000472977 COPRSQ9NQ92 184 aa6.62□□□□□ -1.35
CTSS-203ENST00000472977 LAMTOR5O43504 91 aa6.61□□□□□ -1.35
CTSS-203ENST00000472977 SEZ6Q53EL9 994 aa6.61□□□□□ -1.35
CTSS-203ENST00000472977 PCDH18Q9HCL0 1135 aa6.61□□□□□ -1.35
CTSS-203ENST00000472977 GP6Q9HCN6 339 aa6.61□□□□□ -1.35
CTSS-203ENST00000472977 PPP4R1LQ9P1A2 415 aa6.61□□□□□ -1.35
CTSS-203ENST00000472977 SORBS3O60504 671 aa6.6□□□□□ -1.35
CTSS-203ENST00000472977 AMHP03971 560 aa6.6□□□□□ -1.35
CTSS-203ENST00000472977 CD3EP07766 207 aa6.6□□□□□ -1.35
CTSS-203ENST00000472977 PMS1P54277 932 aaKnown RBP6.6□□□□□ -1.35
CTSS-203ENST00000472977 SURF1Q15526 300 aa6.6□□□□□ -1.35
CTSS-203ENST00000472977 ANKRD39Q53RE8 183 aa6.6□□□□□ -1.35
CTSS-203ENST00000472977 TDRD10Q5VZ19 366 aaKnown RBP6.6□□□□□ -1.35
CTSS-203ENST00000472977 MCTP2Q6DN12 878 aa6.6□□□□□ -1.35
CTSS-203ENST00000472977 RCSD1Q6JBY9 416 aa6.6□□□□□ -1.35
CTSS-203ENST00000472977 KYQ8NBH2 561 aa6.6□□□□□ -1.35
CTSS-203ENST00000472977 TXNDC5Q8NBS9 432 aaKnown RBP6.6□□□□□ -1.35
CTSS-203ENST00000472977 ZNF296Q8WUU4 475 aaPredicted RBP6.6□□□□□ -1.35
CTSS-203ENST00000472977 SMARCC1Q92922 1105 aaPredicted RBP6.6□□□□□ -1.35
CTSS-203ENST00000472977 BRF1Q92994 677 aa6.6□□□□□ -1.35
CTSS-203ENST00000472977 ING1Q9UK53 422 aaPredicted RBP6.6□□□□□ -1.35
CTSS-203ENST00000472977 SF3B6Q9Y3B4 125 aaKnown RBP6.6□□□□□ -1.35
CTSS-203ENST00000472977 RWDD3Q9Y3V2 267 aa6.6□□□□□ -1.35
CTSS-203ENST00000472977 HS3ST3A1Q9Y663 406 aa6.6□□□□□ -1.35
CTSS-203ENST00000472977 FAM86C2PA6NEL3 165 aa6.59□□□□□ -1.35
CTSS-203ENST00000472977 B4GALT3O60512 393 aa6.59□□□□□ -1.35
CTSS-203ENST00000472977 ACRP10323 421 aa6.59□□□□□ -1.35
CTSS-203ENST00000472977 DCAF15Q66K64 600 aa6.59□□□□□ -1.35
CTSS-203ENST00000472977 DNERQ8NFT8 737 aa6.59□□□□□ -1.35
CTSS-203ENST00000472977 MTA3Q9BTC8 594 aa6.59□□□□□ -1.35
CTSS-203ENST00000472977 VTI1BQ9UEU0 232 aa6.59□□□□□ -1.35
CTSS-203ENST00000472977 MCM4P33991 863 aa6.58□□□□□ -1.36
CTSS-203ENST00000472977 ZNF165P49910 485 aa6.58□□□□□ -1.36
CTSS-203ENST00000472977 POU4F1Q01851 419 aa6.58□□□□□ -1.36
CTSS-203ENST00000472977 AXDND1Q5T1B0 1012 aaPredicted RBP6.58□□□□□ -1.36
CTSS-203ENST00000472977 INTS3Q68E01 1043 aaKnown RBP6.58□□□□□ -1.36
CTSS-203ENST00000472977 WWC2Q6AWC2 1192 aa6.58□□□□□ -1.36
CTSS-203ENST00000472977 PLEKHH3Q7Z736 793 aa6.58□□□□□ -1.36
CTSS-203ENST00000472977 PPFIBP1Q86W92 1011 aa6.58□□□□□ -1.36
CTSS-203ENST00000472977 TTLL6Q8N841 843 aa6.58□□□□□ -1.36
CTSS-203ENST00000472977 LCORQ96JN0 433 aaPredicted RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms