RNA–Protein interactions for RNA: ENST00000472441.1

TM4SF1-202, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2 BASIC

Gene TM4SF1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-202ENST00000472441 RIC8AQ9NPQ8 531 aa5.48□□□□□ -1.53
TM4SF1-202ENST00000472441 RMND1Q9NWS8 449 aa5.48□□□□□ -1.53
TM4SF1-202ENST00000472441 NYAP2Q9P242 653 aa5.48□□□□□ -1.53
TM4SF1-202ENST00000472441 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.48□□□□□ -1.53
TM4SF1-202ENST00000472441 MYH4Q9Y623 1939 aa5.47□□□□□ -1.53
TM4SF1-202ENST00000472441 TRIM49BA6NDI0 452 aa5.47□□□□□ -1.53
TM4SF1-202ENST00000472441 hCG_1984214I3L0E3 225 aa5.47□□□□□ -1.53
TM4SF1-202ENST00000472441 RIOK3O14730 519 aaKnown RBP5.47□□□□□ -1.53
TM4SF1-202ENST00000472441 NDUFB10O96000 172 aa5.47□□□□□ -1.53
TM4SF1-202ENST00000472441 KCNA3P22001 575 aa5.47□□□□□ -1.53
TM4SF1-202ENST00000472441 ECE1P42892 770 aa5.47□□□□□ -1.53
TM4SF1-202ENST00000472441 ASIC1P78348 528 aa5.47□□□□□ -1.53
TM4SF1-202ENST00000472441 PAK1Q13153 545 aa5.47□□□□□ -1.53
TM4SF1-202ENST00000472441 TMEM266Q2M3C6 531 aa5.47□□□□□ -1.53
TM4SF1-202ENST00000472441 FILIP1LQ4L180 1135 aa5.47□□□□□ -1.53
TM4SF1-202ENST00000472441 PPP4R3BQ5MIZ7 849 aa5.47□□□□□ -1.53
TM4SF1-202ENST00000472441 ZNF658Q5TYW1 1059 aaPredicted RBP5.47□□□□□ -1.53
TM4SF1-202ENST00000472441 CEP135Q66GS9 1140 aa5.47□□□□□ -1.53
TM4SF1-202ENST00000472441 CCAR2Q8N163 923 aaKnown RBP5.47□□□□□ -1.53
TM4SF1-202ENST00000472441 ZNF713Q8N859 430 aaPredicted RBP5.47□□□□□ -1.53
TM4SF1-202ENST00000472441 ZNF70Q9UC06 446 aaPredicted RBP5.47□□□□□ -1.53
TM4SF1-202ENST00000472441 A0A1W2PRG0 241 aa5.47□□□□□ -1.53
TM4SF1-202ENST00000472441 PSDA5PKW4 1024 aaPredicted RBP5.47□□□□□ -1.53
TM4SF1-202ENST00000472441 SPDYE2BA6NHP3 402 aa5.47□□□□□ -1.53
TM4SF1-202ENST00000472441 MYO1BO43795 1136 aa5.47□□□□□ -1.53
TM4SF1-202ENST00000472441 EDIL3O43854 480 aa5.47□□□□□ -1.53
TM4SF1-202ENST00000472441 ENTPD3O75355 529 aa5.47□□□□□ -1.53
TM4SF1-202ENST00000472441 SPDYE6P0CI01 402 aa5.47□□□□□ -1.53
TM4SF1-202ENST00000472441 TERF1P54274 439 aa5.47□□□□□ -1.53
TM4SF1-202ENST00000472441 PDE4DQ08499 809 aa5.47□□□□□ -1.53
TM4SF1-202ENST00000472441 NR1I3Q14994 352 aa5.47□□□□□ -1.53
TM4SF1-202ENST00000472441 SPECC1LQ69YQ0 1117 aa5.47□□□□□ -1.53
TM4SF1-202ENST00000472441 DYMQ7RTS9 669 aa5.47□□□□□ -1.53
TM4SF1-202ENST00000472441 CDAN1Q8IWY9 1227 aa5.47□□□□□ -1.53
TM4SF1-202ENST00000472441 NIM1KQ8IY84 436 aa5.47□□□□□ -1.53
TM4SF1-202ENST00000472441 FAM177A1Q8N128 213 aaPredicted RBP5.47□□□□□ -1.53
TM4SF1-202ENST00000472441 MYRIPQ8NFW9 859 aa5.47□□□□□ -1.53
TM4SF1-202ENST00000472441 DCAF4Q8WV16 495 aa5.47□□□□□ -1.53
TM4SF1-202ENST00000472441 HPS3Q969F9 1004 aa5.47□□□□□ -1.53
TM4SF1-202ENST00000472441 MKL1Q969V6 931 aa5.47□□□□□ -1.53
TM4SF1-202ENST00000472441 PRIMPOLQ96LW4 560 aa5.47□□□□□ -1.53
TM4SF1-202ENST00000472441 AK8Q96MA6 479 aa5.47□□□□□ -1.53
TM4SF1-202ENST00000472441 TMEM39BQ9GZU3 492 aa5.47□□□□□ -1.53
TM4SF1-202ENST00000472441 DDX25Q9UHL0 483 aaKnown RBP5.47□□□□□ -1.53
TM4SF1-202ENST00000472441 N4BP3O15049 544 aa5.46□□□□□ -1.53
TM4SF1-202ENST00000472441 SSBP05455 408 aaKnown RBP eCLIP5.46□□□□□ -1.53
TM4SF1-202ENST00000472441 BMP3P12645 472 aa5.46□□□□□ -1.53
TM4SF1-202ENST00000472441 IDEP14735 1019 aa5.46□□□□□ -1.53
TM4SF1-202ENST00000472441 MCM6Q14566 821 aa5.46□□□□□ -1.53
TM4SF1-202ENST00000472441 E4F1Q66K89 784 aaPredicted RBP5.46□□□□□ -1.53
TM4SF1-202ENST00000472441 CCDC84Q86UT8 332 aaPredicted RBP5.46□□□□□ -1.53
TM4SF1-202ENST00000472441 ACER1Q8TDN7 264 aa5.46□□□□□ -1.53
TM4SF1-202ENST00000472441 SNX29Q8TEQ0 813 aa5.46□□□□□ -1.53
TM4SF1-202ENST00000472441 CCDC47Q96A33 483 aaKnown RBP5.46□□□□□ -1.53
TM4SF1-202ENST00000472441 MTMR9Q96QG7 549 aa5.46□□□□□ -1.53
TM4SF1-202ENST00000472441 NUDT12Q9BQG2 462 aa5.46□□□□□ -1.53
TM4SF1-202ENST00000472441 MMTAG2Q9BU76 263 aaKnown RBP5.46□□□□□ -1.53
TM4SF1-202ENST00000472441 KBTBD4Q9NVX7 518 aa5.46□□□□□ -1.53
TM4SF1-202ENST00000472441 TAB2Q9NYJ8 693 aa5.46□□□□□ -1.53
TM4SF1-202ENST00000472441 SHTN1A0MZ66 631 aa5.46□□□□□ -1.54
TM4SF1-202ENST00000472441 VIL1P09327 827 aaKnown RBP5.46□□□□□ -1.54
TM4SF1-202ENST00000472441 FCER1AP12319 257 aa5.46□□□□□ -1.54
TM4SF1-202ENST00000472441 HOXA13P31271 388 aaPredicted RBP5.46□□□□□ -1.54
TM4SF1-202ENST00000472441 PMS1P54277 932 aaKnown RBP5.46□□□□□ -1.54
TM4SF1-202ENST00000472441 STIM1Q13586 685 aa5.46□□□□□ -1.54
TM4SF1-202ENST00000472441 KRT79Q5XKE5 535 aa5.46□□□□□ -1.54
TM4SF1-202ENST00000472441 SV2BQ7L1I2 683 aa5.46□□□□□ -1.54
TM4SF1-202ENST00000472441 PPFIBP1Q86W92 1011 aa5.46□□□□□ -1.54
TM4SF1-202ENST00000472441 FBXO11Q86XK2 927 aa5.46□□□□□ -1.54
TM4SF1-202ENST00000472441 IGSF22Q8N9C0 903 aa5.46□□□□□ -1.54
TM4SF1-202ENST00000472441 TRIM47Q96LD4 638 aa5.46□□□□□ -1.54
TM4SF1-202ENST00000472441 SRRTQ9BXP5 876 aaKnown RBP5.46□□□□□ -1.54
TM4SF1-202ENST00000472441 RAB34Q9BZG1 259 aa5.46□□□□□ -1.54
TM4SF1-202ENST00000472441 SLC39A2Q9NP94 309 aa5.46□□□□□ -1.54
TM4SF1-202ENST00000472441 EXOC1Q9NV70 894 aa5.46□□□□□ -1.54
TM4SF1-202ENST00000472441 PIM2Q9P1W9 311 aa5.46□□□□□ -1.54
TM4SF1-202ENST00000472441 RWDD2AQ9UIY3 292 aa5.46□□□□□ -1.54
TM4SF1-202ENST00000472441 PCDHA12Q9UN75 941 aa5.46□□□□□ -1.54
TM4SF1-202ENST00000472441 A0A1B0GTH6 734 aa5.45□□□□□ -1.54
TM4SF1-202ENST00000472441 KCNJ18B7U540 433 aa5.45□□□□□ -1.54
TM4SF1-202ENST00000472441 KLRC4O43908 158 aa5.45□□□□□ -1.54
TM4SF1-202ENST00000472441 ECM2O94769 699 aaPredicted RBP5.45□□□□□ -1.54
TM4SF1-202ENST00000472441 CLK2P49760 499 aaKnown RBP5.45□□□□□ -1.54
TM4SF1-202ENST00000472441 AMPD3Q01432 767 aa5.45□□□□□ -1.54
TM4SF1-202ENST00000472441 CXCL9Q07325 125 aa5.45□□□□□ -1.54
TM4SF1-202ENST00000472441 STK4Q13043 487 aa5.45□□□□□ -1.54
TM4SF1-202ENST00000472441 GRB10Q13322 594 aa5.45□□□□□ -1.54
TM4SF1-202ENST00000472441 KCNJ12Q14500 433 aa5.45□□□□□ -1.54
TM4SF1-202ENST00000472441 KRT31Q15323 416 aa5.45□□□□□ -1.54
TM4SF1-202ENST00000472441 NBPF9Q3BBW0 867 aa5.45□□□□□ -1.54
TM4SF1-202ENST00000472441 CT47A1Q5JQC4 288 aaPredicted RBP5.45□□□□□ -1.54
TM4SF1-202ENST00000472441 SYDE2Q5VT97 1194 aa5.45□□□□□ -1.54
TM4SF1-202ENST00000472441 PPP1R18Q6NYC8 613 aa5.45□□□□□ -1.54
TM4SF1-202ENST00000472441 CCDC174Q6PII3 467 aa5.45□□□□□ -1.54
TM4SF1-202ENST00000472441 FCHSD1Q86WN1 690 aa5.45□□□□□ -1.54
TM4SF1-202ENST00000472441 ANKRD20A12PQ8NF67 263 aa5.45□□□□□ -1.54
TM4SF1-202ENST00000472441 FAM151AQ8WW52 585 aa5.45□□□□□ -1.54
TM4SF1-202ENST00000472441 MTMR8Q96EF0 704 aa5.45□□□□□ -1.54
TM4SF1-202ENST00000472441 CTAGE1Q96RT6 745 aa5.45□□□□□ -1.54
TM4SF1-202ENST00000472441 PSMD1Q99460 953 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms