RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 NFIBO00712 420 aa19.32■□□□□ 0.68
CCM2-205ENST00000472223 FOSP01100 380 aaPredicted RBP19.32■□□□□ 0.68
CCM2-205ENST00000472223 MMP1P03956 469 aa19.32■□□□□ 0.68
CCM2-205ENST00000472223 LACTBP83111 547 aaPredicted RBP19.32■□□□□ 0.68
CCM2-205ENST00000472223 GUCY1B3Q02153 619 aa19.32■□□□□ 0.68
CCM2-205ENST00000472223 GPR142Q7Z601 462 aa19.32■□□□□ 0.68
CCM2-205ENST00000472223 BLIDQ8IZY5 108 aa19.32■□□□□ 0.68
CCM2-205ENST00000472223 ABRAQ8N0Z2 381 aa19.32■□□□□ 0.68
CCM2-205ENST00000472223 REXO1Q8N1G1 1221 aaKnown RBP19.32■□□□□ 0.68
CCM2-205ENST00000472223 CLEC4DQ8WXI8 215 aa19.32■□□□□ 0.68
CCM2-205ENST00000472223 POTEB2H3BUK9 544 aa19.31■□□□□ 0.68
CCM2-205ENST00000472223 PIK3CDO00329 1044 aa19.31■□□□□ 0.68
CCM2-205ENST00000472223 STX6O43752 255 aa19.31■□□□□ 0.68
CCM2-205ENST00000472223 SYT1P21579 422 aa19.31■□□□□ 0.68
CCM2-205ENST00000472223 PSMC4P43686 418 aa19.31■□□□□ 0.68
CCM2-205ENST00000472223 DPP9Q86TI2 863 aa19.31■□□□□ 0.68
CCM2-205ENST00000472223 R3HDMLQ9H3Y0 253 aa19.31■□□□□ 0.68
CCM2-205ENST00000472223 ADD3Q9UEY8 706 aaKnown RBP19.31■□□□□ 0.68
CCM2-205ENST00000472223 SMCHD1A6NHR9 2005 aa19.3■□□□□ 0.68
CCM2-205ENST00000472223 SLC15A5A6NIM6 579 aa19.3■□□□□ 0.68
CCM2-205ENST00000472223 ECM2O94769 699 aaPredicted RBP19.3■□□□□ 0.68
CCM2-205ENST00000472223 GNRH1P01148 92 aa19.3■□□□□ 0.68
CCM2-205ENST00000472223 TAL1P17542 331 aaPredicted RBP19.3■□□□□ 0.68
CCM2-205ENST00000472223 PTPREP23469 700 aa19.3■□□□□ 0.68
CCM2-205ENST00000472223 RPS6P62753 249 aaKnown RBP19.3■□□□□ 0.68
CCM2-205ENST00000472223 AP3B2Q13367 1082 aa19.3■□□□□ 0.68
CCM2-205ENST00000472223 BAATQ14032 418 aaPredicted RBP19.3■□□□□ 0.68
CCM2-205ENST00000472223 TYW1BQ6NUM6 668 aa19.3■□□□□ 0.68
CCM2-205ENST00000472223 FCHSD1Q86WN1 690 aa19.3■□□□□ 0.68
CCM2-205ENST00000472223 JMYQ8N9B5 988 aa19.3■□□□□ 0.68
CCM2-205ENST00000472223 DAGLBQ8NCG7 672 aa19.3■□□□□ 0.68
CCM2-205ENST00000472223 SOCS4Q8WXH5 440 aa19.3■□□□□ 0.68
CCM2-205ENST00000472223 NUDT12Q9BQG2 462 aa19.3■□□□□ 0.68
CCM2-205ENST00000472223 A1CFQ9NQ94 594 aaKnown RBP19.3■□□□□ 0.68
CCM2-205ENST00000472223 CYP39A1Q9NYL5 469 aa19.3■□□□□ 0.68
CCM2-205ENST00000472223 BIN2Q9UBW5 565 aaPredicted RBP19.3■□□□□ 0.68
CCM2-205ENST00000472223 RBBP6Q7Z6E9 1792 aaKnown RBP19.29■□□□□ 0.68
CCM2-205ENST00000472223 CCDC194A0A1B0GVG4 234 aa19.29■□□□□ 0.68
CCM2-205ENST00000472223 HOXA13P31271 388 aaPredicted RBP19.29■□□□□ 0.68
CCM2-205ENST00000472223 HSD17B4P51659 736 aa19.29■□□□□ 0.68
CCM2-205ENST00000472223 USP17L6PQ6QN14 398 aa19.29■□□□□ 0.68
CCM2-205ENST00000472223 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.29■□□□□ 0.68
CCM2-205ENST00000472223 DIS3L2Q8IYB7 885 aaKnown RBP19.29■□□□□ 0.68
CCM2-205ENST00000472223 FOXP1Q9H334 677 aaPredicted RBP19.29■□□□□ 0.68
CCM2-205ENST00000472223 GJB4Q9NTQ9 266 aa19.29■□□□□ 0.68
CCM2-205ENST00000472223 ADORA2AP29274 412 aa19.28■□□□□ 0.68
CCM2-205ENST00000472223 NUCB2P80303 420 aa19.28■□□□□ 0.68
CCM2-205ENST00000472223 UBE2SQ16763 222 aa19.28■□□□□ 0.68
CCM2-205ENST00000472223 JAKMIP3Q5VZ66 844 aa19.28■□□□□ 0.68
CCM2-205ENST00000472223 KRT25Q7Z3Z0 450 aa19.28■□□□□ 0.68
CCM2-205ENST00000472223 PLXNB2O15031 1838 aa19.28■□□□□ 0.68
CCM2-205ENST00000472223 ZNFX1Q9P2E3 1918 aaKnown RBP19.27■□□□□ 0.68
CCM2-205ENST00000472223 MGAMO43451 1857 aa19.27■□□□□ 0.68
CCM2-205ENST00000472223 MEIS2O14770 477 aa19.27■□□□□ 0.68
CCM2-205ENST00000472223 RGS2P41220 211 aa19.27■□□□□ 0.68
CCM2-205ENST00000472223 GHRHRQ02643 423 aa19.27■□□□□ 0.68
CCM2-205ENST00000472223 ARHGEF16Q5VV41 709 aa19.27■□□□□ 0.68
CCM2-205ENST00000472223 DNERQ8NFT8 737 aa19.27■□□□□ 0.68
CCM2-205ENST00000472223 SYTL5Q8TDW5 730 aaPredicted RBP19.27■□□□□ 0.68
CCM2-205ENST00000472223 NSUN6Q8TEA1 469 aaKnown RBP19.27■□□□□ 0.68
CCM2-205ENST00000472223 ZNF296Q8WUU4 475 aaPredicted RBP19.27■□□□□ 0.68
CCM2-205ENST00000472223 TBC1D5Q92609 795 aa19.27■□□□□ 0.68
CCM2-205ENST00000472223 TSKSQ9UJT2 592 aa19.27■□□□□ 0.68
CCM2-205ENST00000472223 PCDHA6Q9UN73 950 aa19.27■□□□□ 0.68
CCM2-205ENST00000472223 PCDHA8Q9Y5H6 950 aa19.27■□□□□ 0.68
CCM2-205ENST00000472223 BTBD18B2RXH4 712 aa19.26■□□□□ 0.67
CCM2-205ENST00000472223 OPLAHO14841 1288 aa19.26■□□□□ 0.67
CCM2-205ENST00000472223 GRB14Q14449 540 aa19.26■□□□□ 0.67
CCM2-205ENST00000472223 NONOQ15233 471 aaKnown RBP eCLIP19.26■□□□□ 0.67
CCM2-205ENST00000472223 SLC30A10Q6XR72 485 aa19.26■□□□□ 0.67
CCM2-205ENST00000472223 CD99L2Q8TCZ2 262 aa19.26■□□□□ 0.67
CCM2-205ENST00000472223 RMDN3Q96TC7 470 aa19.26■□□□□ 0.67
CCM2-205ENST00000472223 ZSCAN16Q9H4T2 348 aaPredicted RBP19.26■□□□□ 0.67
CCM2-205ENST00000472223 NOL7Q9UMY1 257 aaKnown RBP19.26■□□□□ 0.67
CCM2-205ENST00000472223 PGK2P07205 417 aa19.25■□□□□ 0.67
CCM2-205ENST00000472223 MAP2K5Q13163 448 aa19.25■□□□□ 0.67
CCM2-205ENST00000472223 CIZ1Q9ULV3 898 aaPredicted RBP19.25■□□□□ 0.67
CCM2-205ENST00000472223 DIS3Q9Y2L1 958 aaKnown RBP19.25■□□□□ 0.67
CCM2-205ENST00000472223 LOC102724159A0A0B4J2E5 919 aa19.24■□□□□ 0.67
CCM2-205ENST00000472223 ASB14A6NK59 587 aa19.24■□□□□ 0.67
CCM2-205ENST00000472223 ZNF76P36508 570 aa19.24■□□□□ 0.67
CCM2-205ENST00000472223 CTCFP49711 727 aaPredicted RBP19.24■□□□□ 0.67
CCM2-205ENST00000472223 CLK2P49760 499 aaKnown RBP19.24■□□□□ 0.67
CCM2-205ENST00000472223 PRMT2P55345 433 aa19.24■□□□□ 0.67
CCM2-205ENST00000472223 PWP2Q15269 919 aaKnown RBP19.24■□□□□ 0.67
CCM2-205ENST00000472223 PIK3AP1Q6ZUJ8 805 aa19.24■□□□□ 0.67
CCM2-205ENST00000472223 BRAPQ7Z569 592 aa19.24■□□□□ 0.67
CCM2-205ENST00000472223 NOSTRINQ8IVI9 506 aa19.24■□□□□ 0.67
CCM2-205ENST00000472223 TRIM47Q96LD4 638 aa19.24■□□□□ 0.67
CCM2-205ENST00000472223 TAAR1Q96RJ0 339 aa19.24■□□□□ 0.67
CCM2-205ENST00000472223 IWS1Q96ST2 819 aa19.24■□□□□ 0.67
CCM2-205ENST00000472223 NAP1L4Q99733 375 aaKnown RBP19.24■□□□□ 0.67
CCM2-205ENST00000472223 ANO3Q9BYT9 981 aa19.24■□□□□ 0.67
CCM2-205ENST00000472223 TMEM260Q9NX78 707 aa19.24■□□□□ 0.67
CCM2-205ENST00000472223 ATP6V1DQ9Y5K8 247 aa19.24■□□□□ 0.67
CCM2-205ENST00000472223 HSPA1AP0DMV8 641 aaKnown RBP19.23■□□□□ 0.67
CCM2-205ENST00000472223 HSPA1BP0DMV9 641 aaKnown RBP19.23■□□□□ 0.67
CCM2-205ENST00000472223 ZSCAN22P10073 491 aaPredicted RBP19.23■□□□□ 0.67
CCM2-205ENST00000472223 NR5A1Q13285 461 aa19.23■□□□□ 0.67
CCM2-205ENST00000472223 MORN1Q5T089 497 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms