RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 PPP1R12CQ9BZL4 782 aa9.52□□□□□ -0.89
USP48-207ENST00000471752 ZSWIM5Q9P217 1185 aa9.52□□□□□ -0.89
USP48-207ENST00000471752 COL20A1Q9P218 1284 aa9.52□□□□□ -0.89
USP48-207ENST00000471752 PRKAG2Q9UGJ0 569 aa9.52□□□□□ -0.89
USP48-207ENST00000471752 FBXO40Q9UH90 709 aa9.52□□□□□ -0.89
USP48-207ENST00000471752 PLXNA1Q9UIW2 1896 aa9.52□□□□□ -0.89
USP48-207ENST00000471752 TRANK1O15050 2925 aa9.51□□□□□ -0.89
USP48-207ENST00000471752 PTPDC1A2A3K4 754 aa9.51□□□□□ -0.89
USP48-207ENST00000471752 ARVCFO00192 962 aa9.51□□□□□ -0.89
USP48-207ENST00000471752 CSF2RAP15509 400 aa9.51□□□□□ -0.89
USP48-207ENST00000471752 RAG1P15918 1043 aa9.51□□□□□ -0.89
USP48-207ENST00000471752 CALML3P27482 149 aa9.51□□□□□ -0.89
USP48-207ENST00000471752 CST5P28325 142 aaPredicted RBP9.51□□□□□ -0.89
USP48-207ENST00000471752 PBX2P40425 430 aa9.51□□□□□ -0.89
USP48-207ENST00000471752 USH1GQ495M9 461 aa9.51□□□□□ -0.89
USP48-207ENST00000471752 KIAA1211Q6ZU35 1233 aa9.51□□□□□ -0.89
USP48-207ENST00000471752 ENAHQ8N8S7 591 aaPredicted RBP9.51□□□□□ -0.89
USP48-207ENST00000471752 SLC43A3Q8NBI5 491 aa9.51□□□□□ -0.89
USP48-207ENST00000471752 MORC4Q8TE76 937 aa9.51□□□□□ -0.89
USP48-207ENST00000471752 ZFP91Q96JP5 570 aaPredicted RBP9.51□□□□□ -0.89
USP48-207ENST00000471752 TOX2Q96NM4 488 aa9.51□□□□□ -0.89
USP48-207ENST00000471752 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.51□□□□□ -0.891e-14■□□□□ 8.6
USP48-207ENST00000471752 VAT1LQ9HCJ6 419 aa9.51□□□□□ -0.89
USP48-207ENST00000471752 CXXC1Q9P0U4 656 aaPredicted RBP9.51□□□□□ -0.89
USP48-207ENST00000471752 LTBP2Q14767 1821 aa9.5□□□□□ -0.89
USP48-207ENST00000471752 MOXD2PA6NHM9 499 aa9.5□□□□□ -0.89
USP48-207ENST00000471752 ZNF213O14771 459 aa9.5□□□□□ -0.89
USP48-207ENST00000471752 PPP1R11O60927 126 aaPredicted RBP9.5□□□□□ -0.89
USP48-207ENST00000471752 ARIH2O95376 493 aa9.5□□□□□ -0.89
USP48-207ENST00000471752 TIMP1P01033 207 aa9.5□□□□□ -0.89
USP48-207ENST00000471752 CD4P01730 458 aa9.5□□□□□ -0.89
USP48-207ENST00000471752 ALDH5A1P51649 535 aaPredicted RBP9.5□□□□□ -0.89
USP48-207ENST00000471752 RPS6P62753 249 aaKnown RBP9.5□□□□□ -0.89
USP48-207ENST00000471752 NKX3-2P78367 333 aa9.5□□□□□ -0.89
USP48-207ENST00000471752 FSCN1Q16658 493 aaKnown RBP9.5□□□□□ -0.89
USP48-207ENST00000471752 TKFCQ3LXA3 575 aa9.5□□□□□ -0.89
USP48-207ENST00000471752 TMEM240Q5SV17 173 aa9.5□□□□□ -0.89
USP48-207ENST00000471752 GPR153Q6NV75 609 aa9.5□□□□□ -0.89
USP48-207ENST00000471752 TLK2Q86UE8 772 aa9.5□□□□□ -0.89
USP48-207ENST00000471752 FAM126BQ8IXS8 530 aa9.5□□□□□ -0.89
USP48-207ENST00000471752 MYLIPQ8WY64 445 aa9.5□□□□□ -0.89
USP48-207ENST00000471752 TAAR1Q96RJ0 339 aa9.5□□□□□ -0.89
USP48-207ENST00000471752 JMJD4Q9H9V9 463 aa9.5□□□□□ -0.89
USP48-207ENST00000471752 GPHNQ9NQX3 736 aaPredicted RBP9.5□□□□□ -0.89
USP48-207ENST00000471752 STXBP5LQ9Y2K9 1186 aa9.5□□□□□ -0.89
USP48-207ENST00000471752 ELP1O95163 1332 aa9.5□□□□□ -0.89
USP48-207ENST00000471752 ZMYM6O95789 1325 aa9.5□□□□□ -0.89
USP48-207ENST00000471752 XIRP2A4UGR9 3374 aa9.49□□□□□ -0.89
USP48-207ENST00000471752 LCTP09848 1927 aa9.49□□□□□ -0.89
USP48-207ENST00000471752 BDP1A6H8Y1 2624 aa9.49□□□□□ -0.89
USP48-207ENST00000471752 A0A0U1RQG5 324 aaPredicted RBP9.49□□□□□ -0.89
USP48-207ENST00000471752 ASB14A6NK59 587 aa9.49□□□□□ -0.89
USP48-207ENST00000471752 DCDC2CA8MYV0 355 aa9.49□□□□□ -0.89
USP48-207ENST00000471752 DLL1O00548 723 aa9.49□□□□□ -0.89
USP48-207ENST00000471752 OPLAHO14841 1288 aa9.49□□□□□ -0.89
USP48-207ENST00000471752 FDX1P10109 184 aa9.49□□□□□ -0.89
USP48-207ENST00000471752 CCL23P55773 120 aa9.49□□□□□ -0.89
USP48-207ENST00000471752 FPGSQ05932 587 aa9.49□□□□□ -0.89
USP48-207ENST00000471752 GRIN2CQ14957 1233 aa9.49□□□□□ -0.89
USP48-207ENST00000471752 IQSEC1Q6DN90 963 aa9.49□□□□□ -0.89
USP48-207ENST00000471752 MFSD5Q6N075 450 aa9.49□□□□□ -0.89
USP48-207ENST00000471752 STOX1Q6ZVD7 989 aa9.49□□□□□ -0.89
USP48-207ENST00000471752 ZNF365Q70YC5 407 aa9.49□□□□□ -0.89
USP48-207ENST00000471752 CHST3Q7LGC8 479 aa9.49□□□□□ -0.89
USP48-207ENST00000471752 ADGRF4Q8IZF3 695 aa9.49□□□□□ -0.89
USP48-207ENST00000471752 PNMA1Q8ND90 353 aa9.49□□□□□ -0.89
USP48-207ENST00000471752 NUP133Q8WUM0 1156 aa9.49□□□□□ -0.89
USP48-207ENST00000471752 ANKS1AQ92625 1134 aa9.49□□□□□ -0.89
USP48-207ENST00000471752 GLT1D1Q96MS3 346 aa9.49□□□□□ -0.89
USP48-207ENST00000471752 TTC14Q96N46 770 aa9.49□□□□□ -0.89
USP48-207ENST00000471752 ZSCAN10Q96SZ4 725 aaPredicted RBP9.49□□□□□ -0.89
USP48-207ENST00000471752 WDR11Q9BZH6 1224 aa9.49□□□□□ -0.89
USP48-207ENST00000471752 BCAS3Q9H6U6 928 aa9.49□□□□□ -0.89
USP48-207ENST00000471752 DIAPH3Q9NSV4 1193 aa9.49□□□□□ -0.89
USP48-207ENST00000471752 TRMT13Q9NUP7 481 aaKnown RBP9.49□□□□□ -0.89
USP48-207ENST00000471752 RBM47A0AV96 593 aaKnown RBP9.48□□□□□ -0.89
USP48-207ENST00000471752 SORBS3O60504 671 aa9.48□□□□□ -0.89
USP48-207ENST00000471752 B4GALT4O60513 344 aa9.48□□□□□ -0.89
USP48-207ENST00000471752 CYP2C9P11712 490 aa9.48□□□□□ -0.89
USP48-207ENST00000471752 CHMLP26374 656 aa9.48□□□□□ -0.89
USP48-207ENST00000471752 ITGA7Q13683 1181 aa9.48□□□□□ -0.89
USP48-207ENST00000471752 SEC23AQ15436 765 aa9.48□□□□□ -0.89
USP48-207ENST00000471752 QRICH1Q2TAL8 776 aa9.48□□□□□ -0.89
USP48-207ENST00000471752 DUSP28Q4G0W2 176 aa9.48□□□□□ -0.89
USP48-207ENST00000471752 TTC22Q5TAA0 569 aa9.48□□□□□ -0.89
USP48-207ENST00000471752 RNF207Q6ZRF8 634 aa9.48□□□□□ -0.89
USP48-207ENST00000471752 DGKHQ86XP1 1220 aa9.48□□□□□ -0.89
USP48-207ENST00000471752 PCSK9Q8NBP7 692 aaKnown RBP9.48□□□□□ -0.89
USP48-207ENST00000471752 SYTL5Q8TDW5 730 aaPredicted RBP9.48□□□□□ -0.89
USP48-207ENST00000471752 ESR2Q92731 530 aa9.48□□□□□ -0.89
USP48-207ENST00000471752 SCLYQ96I15 445 aa9.48□□□□□ -0.89
USP48-207ENST00000471752 RNPC3Q96LT9 517 aaKnown RBP9.48□□□□□ -0.89
USP48-207ENST00000471752 WNT8AQ9H1J5 351 aa9.48□□□□□ -0.89
USP48-207ENST00000471752 MUC3AQ02505 3323 aa9.48□□□□□ -0.89
USP48-207ENST00000471752 MYL3P08590 195 aa9.47□□□□□ -0.89
USP48-207ENST00000471752 CYP21A2P08686 494 aa9.47□□□□□ -0.89
USP48-207ENST00000471752 MYOGP15173 224 aa9.47□□□□□ -0.89
USP48-207ENST00000471752 EDNRBP24530 442 aa9.47□□□□□ -0.89
USP48-207ENST00000471752 ANTXR2P58335 489 aa9.47□□□□□ -0.89
USP48-207ENST00000471752 CDC37Q16543 378 aaPredicted RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms