RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 PDE4DQ08499 809 aa11.91□□□□□ -0.5
APLF-204ENST00000471727 KRT79Q5XKE5 535 aa11.91□□□□□ -0.5
APLF-204ENST00000471727 APOBEC3HQ6NTF7 200 aaKnown RBP11.91□□□□□ -0.5
APLF-204ENST00000471727 TTI2Q6NXR4 508 aa11.91□□□□□ -0.5
APLF-204ENST00000471727 UNC13DQ70J99 1090 aa11.91□□□□□ -0.5
APLF-204ENST00000471727 COL23A1Q86Y22 540 aaPredicted RBP11.91□□□□□ -0.5
APLF-204ENST00000471727 SMAP1Q8IYB5 467 aaPredicted RBP11.91□□□□□ -0.5
APLF-204ENST00000471727 ADGRF4Q8IZF3 695 aa11.91□□□□□ -0.5
APLF-204ENST00000471727 NUP88Q99567 741 aaPredicted RBP11.91□□□□□ -0.5
APLF-204ENST00000471727 KANSL2Q9H9L4 492 aa11.91□□□□□ -0.5
APLF-204ENST00000471727 ABHD10Q9NUJ1 306 aa11.91□□□□□ -0.5
APLF-204ENST00000471727 TAB2Q9NYJ8 693 aa11.91□□□□□ -0.5
APLF-204ENST00000471727 ABCB11O95342 1321 aa11.91□□□□□ -0.5
APLF-204ENST00000471727 CLK2P49760 499 aaKnown RBP11.9□□□□□ -0.5
APLF-204ENST00000471727 ASIC1P78348 528 aa11.9□□□□□ -0.5
APLF-204ENST00000471727 CC2D2BQ6DHV5 1058 aa11.9□□□□□ -0.5
APLF-204ENST00000471727 IRF2BP1Q8IU81 584 aa11.9□□□□□ -0.5
APLF-204ENST00000471727 LRRC47Q8N1G4 583 aaKnown RBP11.9□□□□□ -0.5
APLF-204ENST00000471727 OR8K1Q8NGG5 319 aa11.9□□□□□ -0.5
APLF-204ENST00000471727 ZNF507Q8TCN5 953 aa11.9□□□□□ -0.5
APLF-204ENST00000471727 CPLX3Q8WVH0 158 aa11.9□□□□□ -0.5
APLF-204ENST00000471727 CPVLQ9H3G5 476 aa11.9□□□□□ -0.5
APLF-204ENST00000471727 PI4KBQ9UBF8 816 aa11.9□□□□□ -0.5
APLF-204ENST00000471727 DDX41Q9UJV9 622 aaKnown RBP11.9□□□□□ -0.5
APLF-204ENST00000471727 LUC7L2Q9Y383 392 aaKnown RBP11.9□□□□□ -0.5
APLF-204ENST00000471727 STK24Q9Y6E0 443 aa11.9□□□□□ -0.5
APLF-204ENST00000471727 FRMPD2Q68DX3 1309 aaPredicted RBP11.9□□□□□ -0.5
APLF-204ENST00000471727 SOWAHDA6NJG2 315 aa11.89□□□□□ -0.51
APLF-204ENST00000471727 F8W031 263 aaPredicted RBP11.89□□□□□ -0.51
APLF-204ENST00000471727 ATP8B1O43520 1251 aa11.89□□□□□ -0.51
APLF-204ENST00000471727 KRT9P35527 623 aa11.89□□□□□ -0.51
APLF-204ENST00000471727 TXKP42681 527 aa11.89□□□□□ -0.51
APLF-204ENST00000471727 FXR1P51114 621 aaKnown RBP eCLIP11.89□□□□□ -0.51
APLF-204ENST00000471727 USP11P51784 963 aa11.89□□□□□ -0.51
APLF-204ENST00000471727 TRAF1Q13077 416 aa11.89□□□□□ -0.51
APLF-204ENST00000471727 ELF2Q15723 593 aa11.89□□□□□ -0.51
APLF-204ENST00000471727 PTPN21Q16825 1174 aa11.89□□□□□ -0.51
APLF-204ENST00000471727 DOK7Q18PE1 504 aa11.89□□□□□ -0.51
APLF-204ENST00000471727 FIGNQ5HY92 759 aa11.89□□□□□ -0.51
APLF-204ENST00000471727 MOXD1Q6UVY6 613 aa11.89□□□□□ -0.51
APLF-204ENST00000471727 RAD9BQ6WBX8 426 aa11.89□□□□□ -0.51
APLF-204ENST00000471727 CSGALNACT2Q8N6G5 542 aa11.89□□□□□ -0.51
APLF-204ENST00000471727 LARP4BQ92615 738 aaKnown RBP11.89□□□□□ -0.51
APLF-204ENST00000471727 COA7Q96BR5 231 aa11.89□□□□□ -0.51
APLF-204ENST00000471727 MMTAG2Q9BU76 263 aaKnown RBP11.89□□□□□ -0.51
APLF-204ENST00000471727 NT5C3AQ9H0P0 336 aa11.89□□□□□ -0.51
APLF-204ENST00000471727 GPCPD1Q9NPB8 672 aa11.89□□□□□ -0.51
APLF-204ENST00000471727 CAPN11Q9UMQ6 739 aa11.89□□□□□ -0.51
APLF-204ENST00000471727 SYNPO2Q9UMS6 1093 aa11.89□□□□□ -0.51
APLF-204ENST00000471727 MRFAP1Q9Y605 127 aa11.89□□□□□ -0.51
APLF-204ENST00000471727 KDM3AQ9Y4C1 1321 aa11.89□□□□□ -0.51
APLF-204ENST00000471727 H0YIN7 160 aa11.89□□□□□ -0.51
APLF-204ENST00000471727 TADA3O75528 432 aa11.89□□□□□ -0.51
APLF-204ENST00000471727 MMP10P09238 476 aa11.89□□□□□ -0.51
APLF-204ENST00000471727 H2AFXP16104 143 aaPredicted RBP11.89□□□□□ -0.51
APLF-204ENST00000471727 GRB10Q13322 594 aa11.89□□□□□ -0.51
APLF-204ENST00000471727 CCDC96Q2M329 555 aa11.89□□□□□ -0.51
APLF-204ENST00000471727 GRIPAP1Q4V328 841 aa11.89□□□□□ -0.51
APLF-204ENST00000471727 ARHGAP29Q52LW3 1261 aa11.89□□□□□ -0.51
APLF-204ENST00000471727 CENPPQ6IPU0 288 aa11.89□□□□□ -0.51
APLF-204ENST00000471727 ZNF662Q6ZS27 426 aa11.89□□□□□ -0.51
APLF-204ENST00000471727 GUF1Q8N442 669 aaKnown RBP11.89□□□□□ -0.51
APLF-204ENST00000471727 GPR161Q8N6U8 529 aaKnown RBP11.89□□□□□ -0.51
APLF-204ENST00000471727 RAD54LQ92698 747 aa11.89□□□□□ -0.51
APLF-204ENST00000471727 DNAJC7Q99615 494 aa11.89□□□□□ -0.51
APLF-204ENST00000471727 DUSP9Q99956 384 aaKnown RBP11.89□□□□□ -0.51
APLF-204ENST00000471727 TUBGCP2Q9BSJ2 902 aa11.89□□□□□ -0.51
APLF-204ENST00000471727 TRIM34Q9BYJ4 488 aa11.89□□□□□ -0.51
APLF-204ENST00000471727 PSTPIP2Q9H939 334 aa11.89□□□□□ -0.51
APLF-204ENST00000471727 BMP2KQ9NSY1 1161 aaPredicted RBP11.89□□□□□ -0.51
APLF-204ENST00000471727 ZNHIT6Q9NWK9 470 aaKnown RBP11.89□□□□□ -0.51
APLF-204ENST00000471727 SERPINA10Q9UK55 444 aa11.89□□□□□ -0.51
APLF-204ENST00000471727 A0A1W2PQJ5 194 aa11.88□□□□□ -0.51
APLF-204ENST00000471727 MPHOSPH10O00566 681 aaKnown RBP11.88□□□□□ -0.51
APLF-204ENST00000471727 MARCH6O60337 910 aa11.88□□□□□ -0.51
APLF-204ENST00000471727 KIF20AO95235 890 aa11.88□□□□□ -0.51
APLF-204ENST00000471727 SCNN1DP51172 638 aa11.88□□□□□ -0.51
APLF-204ENST00000471727 KRT83P78385 493 aa11.88□□□□□ -0.51
APLF-204ENST00000471727 LRRC63Q05C16 580 aa11.88□□□□□ -0.51
APLF-204ENST00000471727 AP3B2Q13367 1082 aa11.88□□□□□ -0.51
APLF-204ENST00000471727 BMS1Q14692 1282 aaKnown RBP11.88□□□□□ -0.51
APLF-204ENST00000471727 NAA30Q147X3 362 aaPredicted RBP11.88□□□□□ -0.51
APLF-204ENST00000471727 ERCC6LQ2NKX8 1250 aa11.88□□□□□ -0.51
APLF-204ENST00000471727 CERKLQ49MI3 558 aaPredicted RBP11.88□□□□□ -0.51
APLF-204ENST00000471727 TMEM119Q4V9L6 283 aa11.88□□□□□ -0.51
APLF-204ENST00000471727 HYIQ5T013 277 aa11.88□□□□□ -0.51
APLF-204ENST00000471727 FKBP15Q5T1M5 1219 aa11.88□□□□□ -0.51
APLF-204ENST00000471727 TMEM179Q6ZVK1 233 aa11.88□□□□□ -0.51
APLF-204ENST00000471727 CEP112Q8N8E3 955 aa11.88□□□□□ -0.51
APLF-204ENST00000471727 SUPT20HQ8NEM7 779 aa11.88□□□□□ -0.51
APLF-204ENST00000471727 CNKSR1Q969H4 720 aa11.88□□□□□ -0.51
APLF-204ENST00000471727 KIFC2Q96AC6 838 aa11.88□□□□□ -0.51
APLF-204ENST00000471727 TMEM260Q9NX78 707 aa11.88□□□□□ -0.51
APLF-204ENST00000471727 DDX25Q9UHL0 483 aaKnown RBP11.88□□□□□ -0.51
APLF-204ENST00000471727 MAPK8IP1Q9UQF2 711 aa11.88□□□□□ -0.51
APLF-204ENST00000471727 CYP3A7-CYP3A51PA0A087WV96 503 aa11.87□□□□□ -0.51
APLF-204ENST00000471727 POTEB2H3BUK9 544 aa11.87□□□□□ -0.51
APLF-204ENST00000471727 ENTPD3O75355 529 aa11.87□□□□□ -0.51
APLF-204ENST00000471727 APBA3O96018 575 aa11.87□□□□□ -0.51
APLF-204ENST00000471727 PRKCSHP14314 528 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms