RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 GOLGA8SH3BPF8 625 aa14.42□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 OTUD7AQ8TE49 926 aaPredicted RBP14.42□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 TBC1D22AQ8WUA7 517 aa14.42□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 ARHGAP45Q92619 1136 aa14.42□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 EXT2Q93063 718 aa14.42□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 GBP5Q96PP8 586 aa14.42□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 NT5C3AQ9H0P0 336 aa14.42□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 TPX2Q9ULW0 747 aaKnown RBP14.42□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 GOLGA8CPA6NN73 597 aa14.42□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 ICA1Q05084 483 aa14.42□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 IWS1Q96ST2 819 aa14.42□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 IFT140Q96RY7 1462 aa14.41□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 GTPBP10A4D1E9 387 aaKnown RBP14.41□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 POLR2FP61218 127 aaKnown RBP14.41□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 MESDQ14696 234 aa14.41□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 LZTS2Q9BRK4 669 aa14.41□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 G3BP2Q9UN86 482 aaKnown RBP14.41□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 NSD2O96028 1365 aa14.41□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 FLT4P35916 1363 aa14.41□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 TIAM1Q13009 1591 aa14.41□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 ATF5Q9Y2D1 282 aaPredicted RBP14.41□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 PMLP29590 882 aa14.41□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 SOX5P35711 763 aa14.41□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 MYOCDQ8IZQ8 938 aa14.41□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 IFT122Q9HBG6 1241 aa14.41□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 KDM3AQ9Y4C1 1321 aa14.41□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 TRAPPC10P48553 1259 aa14.41□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 SMAP1Q8IYB5 467 aaPredicted RBP14.41□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 BBS5Q8N3I7 341 aa14.41□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 MMTAG2Q9BU76 263 aaKnown RBP14.41□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 RASSF4Q9H2L5 321 aa14.41□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 RAD17O75943 681 aa14.41□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 SRGAP2CP0DJJ0 459 aa14.41□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 DESI2Q9BSY9 194 aa14.41□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 ARMCX3Q9UH62 379 aaPredicted RBP14.41□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 INHBAP08476 426 aa14.41□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 ANO4Q32M45 955 aa14.41□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 CCDC84Q86UT8 332 aaPredicted RBP14.41□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 DNAJC7Q99615 494 aa14.41□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 BCAP29Q9UHQ4 241 aa14.41□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 YTHDC2Q9H6S0 1430 aaKnown RBP14.41□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 KLRF2D3W0D1 207 aa14.4□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 CDC37L1Q7L3B6 337 aa14.4□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 SLC12A6Q9UHW9 1150 aa14.4□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 KCNQ4P56696 695 aa14.4□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 ASPHQ12797 758 aa14.4□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 MIGA2Q7L4E1 593 aa14.4□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 CSRNP1Q96S65 589 aa14.4□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 TEKT3Q9BXF9 490 aa14.4□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 NEMP1O14524 444 aa14.4□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 NFX1Q12986 1120 aaKnown RBP14.4□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 ABHD8Q96I13 439 aa14.4□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 CCDC138Q96M89 665 aa14.4□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 DNAJC8O75937 253 aaPredicted RBP14.4□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 TTC4O95801 387 aa14.4□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 TUBBP07437 444 aa14.4□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 KRT40Q6A162 431 aa14.4□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 RAB44Q7Z6P3 723 aaPredicted RBP14.4□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 MLKLQ8NB16 471 aa14.4□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 ANKRD36BP1Q96IX9 119 aa14.4□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 SLC8A2Q9UPR5 921 aa14.4□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 EIF4G3O43432 1585 aaKnown RBP14.4□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 GSTA4O15217 222 aa14.4□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 ARHGAP6O43182 974 aa14.4□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 CLTAP09496 248 aa14.4□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 ZNF18P17022 549 aa14.4□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 KCNA6P17658 529 aa14.4□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 NKX1-1Q15270 411 aaPredicted RBP14.4□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 ABCB5Q2M3G0 1257 aa14.4□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 MAIP1Q8WWC4 291 aa14.4□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 CBX8Q9HC52 389 aa14.4□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 EFCAB14O75071 495 aa14.4□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 TRMT10CQ7L0Y3 403 aaKnown RBP14.4□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 FAM186BQ8IYM0 893 aa14.4□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 NLRP4Q96MN2 994 aa14.4□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 NCOA1Q15788 1441 aa14.4□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 TMTC1Q8IUR5 882 aa14.39□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 TTC1Q99614 292 aa14.39□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 SERTAD1Q9UHV2 236 aa14.39□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 H0YC42 278 aa14.39□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 EEF1B2P24534 225 aaKnown RBP14.39□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 GARSP41250 739 aaKnown RBP14.39□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 PPARAQ07869 468 aa14.39□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 FAM160B1Q5W0V3 765 aa14.39□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 VAMP4O75379 141 aa14.39□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 RLBP1P12271 317 aa14.39□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 ODR4Q5SWX8 454 aa14.39□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 RNF139Q8WU17 664 aa14.39□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 DCTPP1Q9H773 170 aa14.39□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 KLHL14Q9P2G3 628 aa14.39□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 ATF2P15336 505 aa14.39□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 RSBN1LQ6PCB5 846 aaPredicted RBP14.39□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 CDKL2Q92772 493 aa14.39□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 CALN1Q9BXU9 219 aa14.39□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 DBNDD1Q9H9R9 158 aa14.39□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 ABCC1P33527 1531 aa14.39□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 LRCH2Q5VUJ6 765 aa14.39□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 CC2D2BQ6DHV5 1058 aa14.39□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 RWDD4Q6NW29 188 aaKnown RBP14.39□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 PCIF1Q9H4Z3 704 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms