RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 METTL16Q86W50 562 aaKnown RBP5.84□□□□□ -1.47
PRPF40A-207ENST00000471701 NT5DC4Q86YG4 428 aa5.84□□□□□ -1.47
PRPF40A-207ENST00000471701 LZTR1Q8N653 840 aa5.84□□□□□ -1.47
PRPF40A-207ENST00000471701 RCC1LQ96I51 464 aaKnown RBP5.84□□□□□ -1.47
PRPF40A-207ENST00000471701 KLHL25Q9H0H3 589 aa5.84□□□□□ -1.47
PRPF40A-207ENST00000471701 LUC7LQ9NQ29 371 aaKnown RBP5.84□□□□□ -1.47
PRPF40A-207ENST00000471701 SUSD2Q9UGT4 822 aa5.84□□□□□ -1.47
PRPF40A-207ENST00000471701 NUDT5Q9UKK9 219 aa5.84□□□□□ -1.47
PRPF40A-207ENST00000471701 BACE2Q9Y5Z0 518 aa5.84□□□□□ -1.47
PRPF40A-207ENST00000471701 STXBP3O00186 592 aa5.83□□□□□ -1.48
PRPF40A-207ENST00000471701 IGFBP6P24592 240 aaPredicted RBP5.83□□□□□ -1.48
PRPF40A-207ENST00000471701 NASPP49321 788 aaPredicted RBP5.83□□□□□ -1.48
PRPF40A-207ENST00000471701 CAP1Q01518 475 aa5.83□□□□□ -1.48
PRPF40A-207ENST00000471701 KIAA1211LQ6NV74 962 aa5.83□□□□□ -1.48
PRPF40A-207ENST00000471701 ARHGEF39Q8N4T4 335 aa5.83□□□□□ -1.48
PRPF40A-207ENST00000471701 CXorf38Q8TB03 319 aa5.83□□□□□ -1.48
PRPF40A-207ENST00000471701 ALG3Q92685 438 aa5.83□□□□□ -1.48
PRPF40A-207ENST00000471701 APBA2Q99767 749 aa5.83□□□□□ -1.48
PRPF40A-207ENST00000471701 RNF38Q9H0F5 515 aa5.83□□□□□ -1.48
PRPF40A-207ENST00000471701 RTEL1Q9NZ71 1219 aa5.83□□□□□ -1.48
PRPF40A-207ENST00000471701 AKT3Q9Y243 479 aa5.83□□□□□ -1.48
PRPF40A-207ENST00000471701 HCFC2Q9Y5Z7 792 aa5.83□□□□□ -1.48
PRPF40A-207ENST00000471701 NPHP3-ACAD11A0A0J9YXS1 232 aa5.82□□□□□ -1.48
PRPF40A-207ENST00000471701 ANKRD34BA5PLL1 514 aa5.82□□□□□ -1.48
PRPF40A-207ENST00000471701 NPHS1O60500 1241 aa5.82□□□□□ -1.48
PRPF40A-207ENST00000471701 GRB10Q13322 594 aa5.82□□□□□ -1.48
PRPF40A-207ENST00000471701 VHLLQ6RSH7 139 aa5.82□□□□□ -1.48
PRPF40A-207ENST00000471701 CPNE8Q86YQ8 564 aa5.82□□□□□ -1.48
PRPF40A-207ENST00000471701 SYT8Q8NBV8 401 aa5.82□□□□□ -1.48
PRPF40A-207ENST00000471701 MRRFQ96E11 262 aaKnown RBP5.82□□□□□ -1.48
PRPF40A-207ENST00000471701 PEX11GQ96HA9 241 aa5.82□□□□□ -1.48
PRPF40A-207ENST00000471701 SEC16BQ96JE7 1060 aa5.82□□□□□ -1.48
PRPF40A-207ENST00000471701 MCMBPQ9BTE3 642 aa5.82□□□□□ -1.48
PRPF40A-207ENST00000471701 CGGBP1Q9UFW8 167 aaPredicted RBP5.82□□□□□ -1.48
PRPF40A-207ENST00000471701 RWDD3Q9Y3V2 267 aa5.82□□□□□ -1.48
PRPF40A-207ENST00000471701 PMF1-BGLAPU3KQ54 211 aa5.82□□□□□ -1.48
PRPF40A-207ENST00000471701 NOP56O00567 594 aaKnown RBP5.81□□□□□ -1.48
PRPF40A-207ENST00000471701 ZBTB7AO95365 584 aa5.81□□□□□ -1.48
PRPF40A-207ENST00000471701 GLI4P10075 376 aa5.81□□□□□ -1.48
PRPF40A-207ENST00000471701 NAT2P11245 290 aa5.81□□□□□ -1.48
PRPF40A-207ENST00000471701 ATF2P15336 505 aa5.81□□□□□ -1.48
PRPF40A-207ENST00000471701 CASP7P55210 303 aa5.81□□□□□ -1.48
PRPF40A-207ENST00000471701 HDLBPQ00341 1268 aaKnown RBP5.81□□□□□ -1.48
PRPF40A-207ENST00000471701 SLC9A5Q14940 896 aa5.81□□□□□ -1.48
PRPF40A-207ENST00000471701 POMZP3Q6PJE2 187 aa5.81□□□□□ -1.48
PRPF40A-207ENST00000471701 CRACR2BQ8N4Y2 399 aaPredicted RBP5.81□□□□□ -1.48
PRPF40A-207ENST00000471701 SHDQ96IW2 340 aa5.81□□□□□ -1.48
PRPF40A-207ENST00000471701 FFAR3O14843 346 aa5.8□□□□□ -1.48
PRPF40A-207ENST00000471701 ASGR2P07307 311 aa5.8□□□□□ -1.48
PRPF40A-207ENST00000471701 CELA3BP08861 270 aa5.8□□□□□ -1.48
PRPF40A-207ENST00000471701 GJA8P48165 433 aa5.8□□□□□ -1.48
PRPF40A-207ENST00000471701 SLURP1P55000 103 aa5.8□□□□□ -1.48
PRPF40A-207ENST00000471701 TRIM26Q12899 539 aaPredicted RBP5.8□□□□□ -1.48
PRPF40A-207ENST00000471701 FRMD5Q7Z6J6 570 aa5.8□□□□□ -1.48
PRPF40A-207ENST00000471701 TP53I13Q8NBR0 393 aaPredicted RBP5.8□□□□□ -1.48
PRPF40A-207ENST00000471701 NETO2Q8NC67 525 aa5.8□□□□□ -1.48
PRPF40A-207ENST00000471701 FNIP1Q8TF40 1166 aa5.8□□□□□ -1.48
PRPF40A-207ENST00000471701 KLHL6Q8WZ60 621 aa5.8□□□□□ -1.48
PRPF40A-207ENST00000471701 PPP1R14AQ96A00 147 aa5.8□□□□□ -1.48
PRPF40A-207ENST00000471701 TEPSINQ96N21 525 aa5.8□□□□□ -1.48
PRPF40A-207ENST00000471701 RXFP1Q9HBX9 757 aa5.8□□□□□ -1.48
PRPF40A-207ENST00000471701 GULP1Q9UBP9 304 aa5.8□□□□□ -1.48
PRPF40A-207ENST00000471701 INPP5FQ9Y2H2 1132 aa5.8□□□□□ -1.48
PRPF40A-207ENST00000471701 PPP1R11O60927 126 aaPredicted RBP5.79□□□□□ -1.48
PRPF40A-207ENST00000471701 KCNH1O95259 989 aa5.79□□□□□ -1.48
PRPF40A-207ENST00000471701 BVESQ8NE79 360 aa5.79□□□□□ -1.48
PRPF40A-207ENST00000471701 TSPAN17Q96FV3 270 aa5.79□□□□□ -1.48
PRPF40A-207ENST00000471701 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.79□□□□□ -1.48
PRPF40A-207ENST00000471701 STRIP2Q9ULQ0 834 aa5.79□□□□□ -1.48
PRPF40A-207ENST00000471701 C7orf72A4D263 438 aa5.78□□□□□ -1.48
PRPF40A-207ENST00000471701 FUCA1P04066 466 aa5.78□□□□□ -1.48
PRPF40A-207ENST00000471701 FBLN1P23142 703 aa5.78□□□□□ -1.48
PRPF40A-207ENST00000471701 ZNF143P52747 638 aaPredicted RBP5.78□□□□□ -1.48
PRPF40A-207ENST00000471701 B3GNT8Q7Z7M8 397 aa5.78□□□□□ -1.48
PRPF40A-207ENST00000471701 VPS37DQ86XT2 251 aa5.78□□□□□ -1.48
PRPF40A-207ENST00000471701 ANAPC16Q96DE5 110 aa5.78□□□□□ -1.48
PRPF40A-207ENST00000471701 TGIF2Q9GZN2 237 aa5.78□□□□□ -1.48
PRPF40A-207ENST00000471701 BCAS3Q9H6U6 928 aa5.78□□□□□ -1.48
PRPF40A-207ENST00000471701 USP40Q9NVE5 1235 aa5.78□□□□□ -1.48
PRPF40A-207ENST00000471701 PLA2G1BP04054 148 aaKnown RBP5.77□□□□□ -1.49
PRPF40A-207ENST00000471701 PMLP29590 882 aa5.77□□□□□ -1.49
PRPF40A-207ENST00000471701 MC3RP41968 323 aa5.77□□□□□ -1.49
PRPF40A-207ENST00000471701 PLP2Q04941 152 aa5.77□□□□□ -1.49
PRPF40A-207ENST00000471701 NCAPHQ15003 741 aa5.77□□□□□ -1.49
PRPF40A-207ENST00000471701 TTLL7Q6ZT98 887 aa5.77□□□□□ -1.49
PRPF40A-207ENST00000471701 PRRT2Q7Z6L0 340 aaPredicted RBP5.77□□□□□ -1.49
PRPF40A-207ENST00000471701 SAPCD2Q86UD0 394 aa5.77□□□□□ -1.49
PRPF40A-207ENST00000471701 ZNF526Q8TF50 670 aaPredicted RBP5.77□□□□□ -1.49
PRPF40A-207ENST00000471701 CPA5Q8WXQ8 436 aa5.77□□□□□ -1.49
PRPF40A-207ENST00000471701 MTA3Q9BTC8 594 aa5.77□□□□□ -1.49
PRPF40A-207ENST00000471701 ADAM7Q9H2U9 754 aa5.77□□□□□ -1.49
PRPF40A-207ENST00000471701 CCSER2Q9H7U1 834 aa5.77□□□□□ -1.49
PRPF40A-207ENST00000471701 GPRC5CQ9NQ84 441 aa5.77□□□□□ -1.49
PRPF40A-207ENST00000471701 CLEC1BQ9P126 229 aa5.77□□□□□ -1.49
PRPF40A-207ENST00000471701 PLA2G2DQ9UNK4 145 aa5.77□□□□□ -1.49
PRPF40A-207ENST00000471701 EMC9Q9Y3B6 208 aa5.77□□□□□ -1.49
PRPF40A-207ENST00000471701 SH3D21A4FU49 640 aa5.76□□□□□ -1.49
PRPF40A-207ENST00000471701 NTRK1P04629 796 aa5.76□□□□□ -1.49
PRPF40A-207ENST00000471701 PLS3P13797 630 aa5.76□□□□□ -1.49
PRPF40A-207ENST00000471701 CACNB2Q08289 660 aaPredicted RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms