RNA–Protein interactions for RNA: ENST00000471582.5

COL20A1-205, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 1,924 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-205ENST00000471582 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.91■□□□□ 0.94
COL20A1-205ENST00000471582 BRCA1P38398 1863 aaKnown RBP20.91■□□□□ 0.94
COL20A1-205ENST00000471582 MFAP3LO75121 409 aa20.9■□□□□ 0.94
COL20A1-205ENST00000471582 TECP42680 631 aa20.9■□□□□ 0.94
COL20A1-205ENST00000471582 COPB1P53618 953 aaKnown RBP20.9■□□□□ 0.94
COL20A1-205ENST00000471582 TRIM14Q14142 442 aa20.9■□□□□ 0.94
COL20A1-205ENST00000471582 PDIA5Q14554 519 aa20.9■□□□□ 0.94
COL20A1-205ENST00000471582 CCDC96Q2M329 555 aa20.9■□□□□ 0.94
COL20A1-205ENST00000471582 TMEM266Q2M3C6 531 aa20.9■□□□□ 0.94
COL20A1-205ENST00000471582 TRIM65Q6PJ69 517 aa20.9■□□□□ 0.94
COL20A1-205ENST00000471582 CUL5Q93034 780 aa20.9■□□□□ 0.94
COL20A1-205ENST00000471582 DHTKD1Q96HY7 919 aaPredicted RBP20.9■□□□□ 0.94
COL20A1-205ENST00000471582 MMTAG2Q9BU76 263 aaKnown RBP20.9■□□□□ 0.94
COL20A1-205ENST00000471582 KANSL2Q9H9L4 492 aa20.9■□□□□ 0.94
COL20A1-205ENST00000471582 STK17AQ9UEE5 414 aa20.9■□□□□ 0.94
COL20A1-205ENST00000471582 CD2APQ9Y5K6 639 aa20.9■□□□□ 0.94
COL20A1-205ENST00000471582 N4BP3O15049 544 aa20.9■□□□□ 0.94
COL20A1-205ENST00000471582 PPP1R11O60927 126 aaPredicted RBP20.9■□□□□ 0.94
COL20A1-205ENST00000471582 SLU7O95391 586 aaKnown RBP20.9■□□□□ 0.94
COL20A1-205ENST00000471582 TPM1P09493 284 aa20.9■□□□□ 0.94
COL20A1-205ENST00000471582 FECHP22830 423 aa20.9■□□□□ 0.94
COL20A1-205ENST00000471582 EEF1GP26641 437 aaKnown RBP20.9■□□□□ 0.94
COL20A1-205ENST00000471582 MRPL12P52815 198 aaKnown RBP20.9■□□□□ 0.94
COL20A1-205ENST00000471582 RBL2Q08999 1139 aa20.9■□□□□ 0.94
COL20A1-205ENST00000471582 TATDN1Q6P1N9 297 aa20.9■□□□□ 0.94
COL20A1-205ENST00000471582 ZFPM1Q8IX07 1006 aa20.9■□□□□ 0.94
COL20A1-205ENST00000471582 NOC3LQ8WTT2 800 aaKnown RBP20.9■□□□□ 0.94
COL20A1-205ENST00000471582 DCAF4Q8WV16 495 aa20.9■□□□□ 0.94
COL20A1-205ENST00000471582 VPS33BQ9H267 617 aa20.9■□□□□ 0.94
COL20A1-205ENST00000471582 THAP9Q9H5L6 903 aa20.9■□□□□ 0.94
COL20A1-205ENST00000471582 FAM198AQ9UFP1 575 aa20.9■□□□□ 0.94
COL20A1-205ENST00000471582 COBLL1Q53SF7 1204 aa20.89■□□□□ 0.93
COL20A1-205ENST00000471582 PLIN2Q99541 437 aa20.89■□□□□ 0.93
COL20A1-205ENST00000471582 COL2A1P02458 1487 aaPredicted RBP20.89■□□□□ 0.93
COL20A1-205ENST00000471582 CCT6AP40227 531 aaKnown RBP20.88■□□□□ 0.93
COL20A1-205ENST00000471582 DALRD3Q5D0E6 543 aaKnown RBP20.88■□□□□ 0.93
COL20A1-205ENST00000471582 TTBK2Q6IQ55 1244 aa20.88■□□□□ 0.93
COL20A1-205ENST00000471582 NAP1L4Q99733 375 aaKnown RBP20.88■□□□□ 0.93
COL20A1-205ENST00000471582 LRWD1Q9UFC0 647 aa20.88■□□□□ 0.93
COL20A1-205ENST00000471582 ZNF215Q9UL58 517 aaPredicted RBP20.88■□□□□ 0.93
COL20A1-205ENST00000471582 EDIL3O43854 480 aa20.88■□□□□ 0.93
COL20A1-205ENST00000471582 GYPCP04921 128 aa20.88■□□□□ 0.93
COL20A1-205ENST00000471582 GCFC2P16383 781 aaKnown RBP20.88■□□□□ 0.93
COL20A1-205ENST00000471582 HOXA7P31268 230 aaPredicted RBP20.88■□□□□ 0.93
COL20A1-205ENST00000471582 TXKP42681 527 aa20.88■□□□□ 0.93
COL20A1-205ENST00000471582 CERKLQ49MI3 558 aaPredicted RBP20.88■□□□□ 0.93
COL20A1-205ENST00000471582 IRF2BP1Q8IU81 584 aa20.88■□□□□ 0.93
COL20A1-205ENST00000471582 EXOC1Q9NV70 894 aa20.88■□□□□ 0.93
COL20A1-205ENST00000471582 ATRNL1Q5VV63 1379 aa20.88■□□□□ 0.93
COL20A1-205ENST00000471582 DDTLA6NHG4 134 aaPredicted RBP20.87■□□□□ 0.93
COL20A1-205ENST00000471582 YDJCA8MPS7 323 aa20.87■□□□□ 0.93
COL20A1-205ENST00000471582 SLC37A4O43826 429 aa20.87■□□□□ 0.93
COL20A1-205ENST00000471582 TDP2O95551 362 aa20.87■□□□□ 0.93
COL20A1-205ENST00000471582 PTGER2P43116 358 aa20.87■□□□□ 0.93
COL20A1-205ENST00000471582 ATP2B2Q01814 1243 aa20.87■□□□□ 0.93
COL20A1-205ENST00000471582 TOGARAM2Q6ZUX3 1019 aa20.87■□□□□ 0.93
COL20A1-205ENST00000471582 LARGE2Q8N3Y3 721 aa20.87■□□□□ 0.93
COL20A1-205ENST00000471582 PDCL2Q8N4E4 241 aa20.87■□□□□ 0.93
COL20A1-205ENST00000471582 MAPK8IP1Q9UQF2 711 aa20.87■□□□□ 0.93
COL20A1-205ENST00000471582 BICDL2A1A5D9 508 aa20.86■□□□□ 0.93
COL20A1-205ENST00000471582 USP17L10C9JJH3 530 aa20.86■□□□□ 0.93
COL20A1-205ENST00000471582 TNNI2P48788 182 aa20.86■□□□□ 0.93
COL20A1-205ENST00000471582 TTI2Q6NXR4 508 aa20.86■□□□□ 0.93
COL20A1-205ENST00000471582 TMEM179Q6ZVK1 233 aa20.86■□□□□ 0.93
COL20A1-205ENST00000471582 KCTD1Q719H9 257 aa20.86■□□□□ 0.93
COL20A1-205ENST00000471582 SH3BP5LQ7L8J4 393 aa20.86■□□□□ 0.93
COL20A1-205ENST00000471582 TAB2Q9NYJ8 693 aa20.86■□□□□ 0.93
COL20A1-205ENST00000471582 PPP1R1BQ9UD71 204 aaPredicted RBP20.86■□□□□ 0.93
COL20A1-205ENST00000471582 DNAI1Q9UI46 699 aa20.86■□□□□ 0.93
COL20A1-205ENST00000471582 COBLO75128 1261 aa20.86■□□□□ 0.93
COL20A1-205ENST00000471582 EEF2P13639 858 aaKnown RBP20.86■□□□□ 0.93
COL20A1-205ENST00000471582 CASP14P31944 242 aa20.86■□□□□ 0.93
COL20A1-205ENST00000471582 SLC16A2P36021 539 aa20.86■□□□□ 0.93
COL20A1-205ENST00000471582 CACNB3P54284 484 aa20.86■□□□□ 0.93
COL20A1-205ENST00000471582 ASIC1P78348 528 aa20.86■□□□□ 0.93
COL20A1-205ENST00000471582 TCP10Q12799 353 aa20.86■□□□□ 0.93
COL20A1-205ENST00000471582 GRB10Q13322 594 aa20.86■□□□□ 0.93
COL20A1-205ENST00000471582 TRIM34Q9BYJ4 488 aa20.86■□□□□ 0.93
COL20A1-205ENST00000471582 VPS16Q9H269 839 aa20.86■□□□□ 0.93
COL20A1-205ENST00000471582 PSTPIP2Q9H939 334 aa20.86■□□□□ 0.93
COL20A1-205ENST00000471582 TRIM49BA6NDI0 452 aa20.85■□□□□ 0.93
COL20A1-205ENST00000471582 LGALS16A8MUM7 142 aa20.85■□□□□ 0.93
COL20A1-205ENST00000471582 ENTPD3O75355 529 aa20.85■□□□□ 0.93
COL20A1-205ENST00000471582 CCDC175P0C221 793 aa20.85■□□□□ 0.93
COL20A1-205ENST00000471582 CCNE1P24864 410 aa20.85■□□□□ 0.93
COL20A1-205ENST00000471582 SLC1A4P43007 532 aa20.85■□□□□ 0.93
COL20A1-205ENST00000471582 PDE4DQ08499 809 aa20.85■□□□□ 0.93
COL20A1-205ENST00000471582 CNNM4Q6P4Q7 775 aa20.85■□□□□ 0.93
COL20A1-205ENST00000471582 SV2BQ7L1I2 683 aa20.85■□□□□ 0.93
COL20A1-205ENST00000471582 TRIM47Q96LD4 638 aa20.85■□□□□ 0.93
COL20A1-205ENST00000471582 SRRTQ9BXP5 876 aaKnown RBP20.85■□□□□ 0.93
COL20A1-205ENST00000471582 PCDHAC2Q9Y5I4 1007 aa20.85■□□□□ 0.93
COL20A1-205ENST00000471582 ARFGEF1Q9Y6D6 1849 aa20.85■□□□□ 0.93
COL20A1-205ENST00000471582 PVALEFA0A1B0GWK0 134 aa20.84■□□□□ 0.93
COL20A1-205ENST00000471582 A0A1W2PQC6 194 aa20.84■□□□□ 0.93
COL20A1-205ENST00000471582 PMS1P54277 932 aaKnown RBP20.84■□□□□ 0.93
COL20A1-205ENST00000471582 UBE2SQ16763 222 aa20.84■□□□□ 0.93
COL20A1-205ENST00000471582 ZSCAN29Q8IWY8 852 aaPredicted RBP20.84■□□□□ 0.93
COL20A1-205ENST00000471582 P2RX5Q93086 422 aa20.84■□□□□ 0.93
COL20A1-205ENST00000471582 ZNF277Q9NRM2 450 aaPredicted RBP20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms