RNA–Protein interactions for RNA: ENST00000471423.1

VPS72-204, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 2

Gene VPS72, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-204ENST00000471423 DEFB118Q96PH6 123 aa20.51■□□□□ 0.87
VPS72-204ENST00000471423 SYNGAP1Q96PV0 1343 aa20.51■□□□□ 0.87
VPS72-204ENST00000471423 CCDC196A0A1B0GTZ2 297 aa20.5■□□□□ 0.87
VPS72-204ENST00000471423 AK2P54819 239 aa20.5■□□□□ 0.87
VPS72-204ENST00000471423 CCT2P78371 535 aaKnown RBP20.5■□□□□ 0.87
VPS72-204ENST00000471423 PRAMEF19Q5SWL8 479 aa20.5■□□□□ 0.87
VPS72-204ENST00000471423 ARMCX2Q7L311 632 aa20.5■□□□□ 0.87
VPS72-204ENST00000471423 MSL3Q8N5Y2 521 aaKnown RBP20.5■□□□□ 0.87
VPS72-204ENST00000471423 NCOA5Q9HCD5 579 aaKnown RBP20.5■□□□□ 0.87
VPS72-204ENST00000471423 SNAI1O95863 264 aaPredicted RBP20.49■□□□□ 0.87
VPS72-204ENST00000471423 CFBP00751 764 aa20.49■□□□□ 0.87
VPS72-204ENST00000471423 CNGA1P29973 690 aa20.49■□□□□ 0.87
VPS72-204ENST00000471423 STK3Q13188 491 aa20.49■□□□□ 0.87
VPS72-204ENST00000471423 U2AF1L4Q8WU68 220 aaKnown RBP20.49■□□□□ 0.87
VPS72-204ENST00000471423 ZNF274Q96GC6 653 aaPredicted RBP20.49■□□□□ 0.87
VPS72-204ENST00000471423 ALDH8A1Q9H2A2 487 aaPredicted RBP20.49■□□□□ 0.87
VPS72-204ENST00000471423 UPF2Q9HAU5 1272 aaKnown RBP20.49■□□□□ 0.87
VPS72-204ENST00000471423 CNPY2Q9Y2B0 182 aa20.49■□□□□ 0.87
VPS72-204ENST00000471423 DDX49Q9Y6V7 483 aaKnown RBP20.49■□□□□ 0.87
VPS72-204ENST00000471423 MCM3APO60318 1980 aa20.48■□□□□ 0.87
VPS72-204ENST00000471423 LRRC37A2A6NM11 1700 aa20.48■□□□□ 0.87
VPS72-204ENST00000471423 EN2P19622 333 aaPredicted RBP20.48■□□□□ 0.87
VPS72-204ENST00000471423 GJA8P48165 433 aa20.48■□□□□ 0.87
VPS72-204ENST00000471423 RBM25P49756 843 aaKnown RBP20.48■□□□□ 0.87
VPS72-204ENST00000471423 ALDH5A1P51649 535 aaPredicted RBP20.48■□□□□ 0.87
VPS72-204ENST00000471423 NEK4P51957 841 aa20.48■□□□□ 0.87
VPS72-204ENST00000471423 SYTL5Q8TDW5 730 aaPredicted RBP20.48■□□□□ 0.87
VPS72-204ENST00000471423 SHISA4Q96DD7 197 aa20.48■□□□□ 0.87
VPS72-204ENST00000471423 MAF1Q9H063 256 aa20.48■□□□□ 0.87
VPS72-204ENST00000471423 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.48■□□□□ 0.87
VPS72-204ENST00000471423 COL20A1Q9P218 1284 aa20.48■□□□□ 0.87
VPS72-204ENST00000471423 ADD3Q9UEY8 706 aaKnown RBP20.48■□□□□ 0.87
VPS72-204ENST00000471423 NRBP1Q9UHY1 535 aa20.48■□□□□ 0.87
VPS72-204ENST00000471423 ASB14A6NK59 587 aa20.47■□□□□ 0.87
VPS72-204ENST00000471423 SGPL1O95470 568 aa20.47■□□□□ 0.87
VPS72-204ENST00000471423 HSD17B4P51659 736 aa20.47■□□□□ 0.87
VPS72-204ENST00000471423 ANKRD1Q15327 319 aa20.47■□□□□ 0.87
VPS72-204ENST00000471423 NOL8Q76FK4 1167 aaKnown RBP20.47■□□□□ 0.87
VPS72-204ENST00000471423 HEATR3Q7Z4Q2 680 aa20.47■□□□□ 0.87
VPS72-204ENST00000471423 GPKOWQ92917 476 aaPredicted RBP eCLIP20.47■□□□□ 0.87
VPS72-204ENST00000471423 KIF2CQ99661 725 aa20.47■□□□□ 0.87
VPS72-204ENST00000471423 ZHX1Q9UKY1 873 aaPredicted RBP20.47■□□□□ 0.87
VPS72-204ENST00000471423 TPCN1Q9ULQ1 816 aa20.47■□□□□ 0.87
VPS72-204ENST00000471423 V9GY48 417 aaPredicted RBP20.47■□□□□ 0.87
VPS72-204ENST00000471423 FRMPD3Q5JV73 1810 aa20.46■□□□□ 0.87
VPS72-204ENST00000471423 ZNF865P0CJ78 1059 aaPredicted RBP20.46■□□□□ 0.87
VPS72-204ENST00000471423 HOXA13P31271 388 aaPredicted RBP20.46■□□□□ 0.87
VPS72-204ENST00000471423 GHRHRQ02643 423 aa20.46■□□□□ 0.87
VPS72-204ENST00000471423 WWC2Q6AWC2 1192 aa20.46■□□□□ 0.87
VPS72-204ENST00000471423 DDX20Q9UHI6 824 aaKnown RBP20.46■□□□□ 0.87
VPS72-204ENST00000471423 SEPT4O43236 478 aa20.45■□□□□ 0.86
VPS72-204ENST00000471423 PPFIA3O75145 1194 aa20.45■□□□□ 0.86
VPS72-204ENST00000471423 NTRK3Q16288 839 aa20.45■□□□□ 0.86
VPS72-204ENST00000471423 LHX8Q68G74 356 aa20.45■□□□□ 0.86
VPS72-204ENST00000471423 DNERQ8NFT8 737 aa20.45■□□□□ 0.86
VPS72-204ENST00000471423 PHKBQ93100 1093 aa20.45■□□□□ 0.86
VPS72-204ENST00000471423 CRISPLD2Q9H0B8 497 aa20.45■□□□□ 0.86
VPS72-204ENST00000471423 ABHD16BQ9H3Z7 469 aa20.45■□□□□ 0.86
VPS72-204ENST00000471423 GCOM1H8Y6P7 765 aaPredicted RBP20.44■□□□□ 0.86
VPS72-204ENST00000471423 TFRCP02786 760 aaKnown RBP20.44■□□□□ 0.86
VPS72-204ENST00000471423 POLR2MP0CAP2 368 aa20.44■□□□□ 0.86
VPS72-204ENST00000471423 IFNAR1P17181 557 aa20.44■□□□□ 0.86
VPS72-204ENST00000471423 ACVR2BQ13705 512 aa20.44■□□□□ 0.86
VPS72-204ENST00000471423 ANO1Q5XXA6 986 aa20.44■□□□□ 0.86
VPS72-204ENST00000471423 TAAR1Q96RJ0 339 aa20.44■□□□□ 0.86
VPS72-204ENST00000471423 BACH2Q9BYV9 841 aa20.44■□□□□ 0.86
VPS72-204ENST00000471423 KATNBL1Q9H079 304 aa20.44■□□□□ 0.86
VPS72-204ENST00000471423 LOC102724159A0A0B4J2E5 919 aa20.43■□□□□ 0.86
VPS72-204ENST00000471423 CPLX1O14810 134 aa20.43■□□□□ 0.86
VPS72-204ENST00000471423 MSCO60682 206 aa20.43■□□□□ 0.86
VPS72-204ENST00000471423 SCRN1Q12765 414 aa20.43■□□□□ 0.86
VPS72-204ENST00000471423 PWP2Q15269 919 aaKnown RBP20.43■□□□□ 0.86
VPS72-204ENST00000471423 EEPD1Q7L9B9 569 aa20.43■□□□□ 0.86
VPS72-204ENST00000471423 FBXO16Q8IX29 292 aaPredicted RBP20.43■□□□□ 0.86
VPS72-204ENST00000471423 SAMD3Q8N6K7 520 aa20.43■□□□□ 0.86
VPS72-204ENST00000471423 MORC4Q8TE76 937 aa20.43■□□□□ 0.86
VPS72-204ENST00000471423 RMDN3Q96TC7 470 aa20.43■□□□□ 0.86
VPS72-204ENST00000471423 SLC26A6Q9BXS9 759 aa20.43■□□□□ 0.86
VPS72-204ENST00000471423 SLKQ9H2G2 1235 aaPredicted RBP20.43■□□□□ 0.86
VPS72-204ENST00000471423 MAP3K20Q9NYL2 800 aaKnown RBP20.43■□□□□ 0.86
VPS72-204ENST00000471423 MKI67P46013 3256 aaKnown RBP20.42■□□□□ 0.86
VPS72-204ENST00000471423 hCG_1984214I3L0E3 225 aa20.42■□□□□ 0.86
VPS72-204ENST00000471423 STXBP3O00186 592 aa20.42■□□□□ 0.86
VPS72-204ENST00000471423 PRPF3O43395 683 aaKnown RBP20.42■□□□□ 0.86
VPS72-204ENST00000471423 PFKFB2O60825 505 aa20.42■□□□□ 0.86
VPS72-204ENST00000471423 LARGE1O95461 756 aa20.42■□□□□ 0.86
VPS72-204ENST00000471423 SCG2P13521 617 aa20.42■□□□□ 0.86
VPS72-204ENST00000471423 AKR1A1P14550 325 aa20.42■□□□□ 0.86
VPS72-204ENST00000471423 EIF2AK2P19525 551 aaKnown RBP20.42■□□□□ 0.86
VPS72-204ENST00000471423 EDNRBP24530 442 aa20.42■□□□□ 0.86
VPS72-204ENST00000471423 NAPAP54920 295 aa20.42■□□□□ 0.86
VPS72-204ENST00000471423 PDE4DQ08499 809 aa20.42■□□□□ 0.86
VPS72-204ENST00000471423 PFKFB3Q16875 520 aaPredicted RBP20.42■□□□□ 0.86
VPS72-204ENST00000471423 TYW1BQ6NUM6 668 aa20.42■□□□□ 0.86
VPS72-204ENST00000471423 FCHSD1Q86WN1 690 aa20.42■□□□□ 0.86
VPS72-204ENST00000471423 ZNF713Q8N859 430 aaPredicted RBP20.42■□□□□ 0.86
VPS72-204ENST00000471423 NSUN6Q8TEA1 469 aaKnown RBP20.42■□□□□ 0.86
VPS72-204ENST00000471423 LENG1Q96BZ8 264 aaPredicted RBP20.42■□□□□ 0.86
VPS72-204ENST00000471423 TBC1D32Q96NH3 1257 aa20.42■□□□□ 0.86
VPS72-204ENST00000471423 MPHOSPH6Q99547 160 aaKnown RBP20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms