RNA–Protein interactions for RNA: ENST00000471297.1

SMNDC1-204, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 823 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-204ENST00000471297 DBNDD1Q9H9R9 158 aa7.12□□□□□ -1.27
SMNDC1-204ENST00000471297 ZNF287Q9HBT7 754 aa7.12□□□□□ -1.27
SMNDC1-204ENST00000471297 FAM13BQ9NYF5 915 aa7.12□□□□□ -1.27
SMNDC1-204ENST00000471297 PRR12Q9ULL5 1215 aa7.12□□□□□ -1.27
SMNDC1-204ENST00000471297 ANGEL1Q9UNK9 670 aaKnown RBP7.12□□□□□ -1.27
SMNDC1-204ENST00000471297 KIF3AQ9Y496 699 aa7.12□□□□□ -1.27
SMNDC1-204ENST00000471297 COL11A2P13942 1736 aaPredicted RBP7.12□□□□□ -1.27
SMNDC1-204ENST00000471297 MYO5AQ9Y4I1 1855 aaKnown RBP7.11□□□□□ -1.27
SMNDC1-204ENST00000471297 MAST2Q6P0Q8 1798 aa7.11□□□□□ -1.27
SMNDC1-204ENST00000471297 WDR33Q9C0J8 1336 aaKnown RBP7.11□□□□□ -1.27
SMNDC1-204ENST00000471297 ERICH2A1L162 156 aa7.11□□□□□ -1.27
SMNDC1-204ENST00000471297 SOWAHDA6NJG2 315 aa7.11□□□□□ -1.27
SMNDC1-204ENST00000471297 H3BRB1 525 aa7.11□□□□□ -1.27
SMNDC1-204ENST00000471297 PPIP5K2O43314 1243 aa7.11□□□□□ -1.27
SMNDC1-204ENST00000471297 ORC4O43929 436 aa7.11□□□□□ -1.27
SMNDC1-204ENST00000471297 LARGE1O95461 756 aa7.11□□□□□ -1.27
SMNDC1-204ENST00000471297 GRNP28799 593 aaKnown RBP7.11□□□□□ -1.27
SMNDC1-204ENST00000471297 GJB2P29033 226 aa7.11□□□□□ -1.27
SMNDC1-204ENST00000471297 PDIA3P30101 505 aaKnown RBP7.11□□□□□ -1.27
SMNDC1-204ENST00000471297 ANTXR2P58335 489 aa7.11□□□□□ -1.27
SMNDC1-204ENST00000471297 HMGN5P82970 282 aaKnown RBP7.11□□□□□ -1.27
SMNDC1-204ENST00000471297 SRSF11Q05519 484 aaKnown RBP7.11□□□□□ -1.27
SMNDC1-204ENST00000471297 APOBRQ0VD83 1088 aa7.11□□□□□ -1.27
SMNDC1-204ENST00000471297 COL9A3Q14050 684 aaPredicted RBP7.11□□□□□ -1.27
SMNDC1-204ENST00000471297 GRIK5Q16478 980 aa7.11□□□□□ -1.27
SMNDC1-204ENST00000471297 AOC3Q16853 763 aa7.11□□□□□ -1.27
SMNDC1-204ENST00000471297 CCDC178Q5BJE1 867 aa7.11□□□□□ -1.27
SMNDC1-204ENST00000471297 C12orf60Q5U649 245 aa7.11□□□□□ -1.27
SMNDC1-204ENST00000471297 SYNE3Q6ZMZ3 975 aa7.11□□□□□ -1.27
SMNDC1-204ENST00000471297 CYB5R4Q7L1T6 521 aa7.11□□□□□ -1.27
SMNDC1-204ENST00000471297 CHST3Q7LGC8 479 aa7.11□□□□□ -1.27
SMNDC1-204ENST00000471297 SGMS1Q86VZ5 419 aa7.11□□□□□ -1.27
SMNDC1-204ENST00000471297 TEX11Q8IYF3 940 aa7.11□□□□□ -1.27
SMNDC1-204ENST00000471297 NECAB1Q8N987 351 aa7.11□□□□□ -1.27
SMNDC1-204ENST00000471297 GPR152Q8TDT2 470 aa7.11□□□□□ -1.27
SMNDC1-204ENST00000471297 IGDCC4Q8TDY8 1250 aa7.11□□□□□ -1.27
SMNDC1-204ENST00000471297 SH3RF3Q8TEJ3 882 aaPredicted RBP7.11□□□□□ -1.27
SMNDC1-204ENST00000471297 TGFBRAP1Q8WUH2 860 aa7.11□□□□□ -1.27
SMNDC1-204ENST00000471297 GTF3C6Q969F1 213 aa7.11□□□□□ -1.27
SMNDC1-204ENST00000471297 TEKT1Q969V4 418 aa7.11□□□□□ -1.27
SMNDC1-204ENST00000471297 SLC30A3Q99726 388 aa7.11□□□□□ -1.27
SMNDC1-204ENST00000471297 LRRC2Q9BYS8 371 aa7.11□□□□□ -1.27
SMNDC1-204ENST00000471297 TUT1Q9H6E5 874 aaKnown RBP7.11□□□□□ -1.27
SMNDC1-204ENST00000471297 TOMM22Q9NS69 142 aa7.11□□□□□ -1.27
SMNDC1-204ENST00000471297 ZSWIM5Q9P217 1185 aa7.11□□□□□ -1.27
SMNDC1-204ENST00000471297 TTF2Q9UNY4 1162 aaKnown RBP7.11□□□□□ -1.27
SMNDC1-204ENST00000471297 MYH13Q9UKX3 1938 aa7.11□□□□□ -1.27
SMNDC1-204ENST00000471297 CCDC88AQ3V6T2 1871 aa7.11□□□□□ -1.27
SMNDC1-204ENST00000471297 SLX4Q8IY92 1834 aa7.11□□□□□ -1.27
SMNDC1-204ENST00000471297 SNED1Q8TER0 1413 aa7.1□□□□□ -1.27
SMNDC1-204ENST00000471297 NEDD4P46934 1319 aa7.1□□□□□ -1.27
SMNDC1-204ENST00000471297 MYO3BQ8WXR4 1341 aa7.1□□□□□ -1.27
SMNDC1-204ENST00000471297 CCDC69A6NI79 296 aa7.1□□□□□ -1.27
SMNDC1-204ENST00000471297 GOLGA6L22H0YM25 854 aa7.1□□□□□ -1.27
SMNDC1-204ENST00000471297 SH2B2O14492 632 aaPredicted RBP7.1□□□□□ -1.27
SMNDC1-204ENST00000471297 IFIT3O14879 490 aaKnown RBP7.1□□□□□ -1.27
SMNDC1-204ENST00000471297 POLR3DP05423 398 aaPredicted RBP7.1□□□□□ -1.27
SMNDC1-204ENST00000471297 MCM4P33991 863 aa7.1□□□□□ -1.27
SMNDC1-204ENST00000471297 MAP2K3P46734 347 aa7.1□□□□□ -1.27
SMNDC1-204ENST00000471297 MMP14P50281 582 aa7.1□□□□□ -1.27
SMNDC1-204ENST00000471297 RCAN1P53805 252 aa7.1□□□□□ -1.27
SMNDC1-204ENST00000471297 RHBDL3P58872 404 aa7.1□□□□□ -1.27
SMNDC1-204ENST00000471297 ST3GAL1Q11201 340 aa7.1□□□□□ -1.27
SMNDC1-204ENST00000471297 SCRN1Q12765 414 aa7.1□□□□□ -1.27
SMNDC1-204ENST00000471297 STK3Q13188 491 aa7.1□□□□□ -1.27
SMNDC1-204ENST00000471297 WTAPQ15007 396 aa7.1□□□□□ -1.27
SMNDC1-204ENST00000471297 TMEM67Q5HYA8 995 aa7.1□□□□□ -1.27
SMNDC1-204ENST00000471297 RRP12Q5JTH9 1297 aaKnown RBP7.1□□□□□ -1.27
SMNDC1-204ENST00000471297 DACT2Q5SW24 774 aa7.1□□□□□ -1.27
SMNDC1-204ENST00000471297 LARP1BQ659C4 914 aaKnown RBP7.1□□□□□ -1.27
SMNDC1-204ENST00000471297 CPLX2Q6PUV4 134 aaKnown RBP7.1□□□□□ -1.27
SMNDC1-204ENST00000471297 NFXL1Q6ZNB6 911 aa7.1□□□□□ -1.27
SMNDC1-204ENST00000471297 IQCA1Q86XH1 822 aa7.1□□□□□ -1.27
SMNDC1-204ENST00000471297 CERS5Q8N5B7 392 aa7.1□□□□□ -1.27
SMNDC1-204ENST00000471297 RGS22Q8NE09 1264 aa7.1□□□□□ -1.27
SMNDC1-204ENST00000471297 ZDHHC15Q96MV8 337 aa7.1□□□□□ -1.27
SMNDC1-204ENST00000471297 UBAC1Q9BSL1 405 aa7.1□□□□□ -1.27
SMNDC1-204ENST00000471297 GSX2Q9BZM3 304 aa7.1□□□□□ -1.27
SMNDC1-204ENST00000471297 C11orf16Q9NQ32 467 aa7.1□□□□□ -1.27
SMNDC1-204ENST00000471297 USP40Q9NVE5 1235 aa7.1□□□□□ -1.27
SMNDC1-204ENST00000471297 MCM9Q9NXL9 1143 aa7.1□□□□□ -1.27
SMNDC1-204ENST00000471297 NAP1L2Q9ULW6 460 aaPredicted RBP7.1□□□□□ -1.27
SMNDC1-204ENST00000471297 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.1□□□□□ -1.27
SMNDC1-204ENST00000471297 DAGLAQ9Y4D2 1042 aa7.1□□□□□ -1.27
SMNDC1-204ENST00000471297 ATP6V1DQ9Y5K8 247 aa7.1□□□□□ -1.27
SMNDC1-204ENST00000471297 KIAA1551Q9HCM1 1747 aa7.1□□□□□ -1.27
SMNDC1-204ENST00000471297 KLF18A0A0U1RQI7 1052 aa7.09□□□□□ -1.27
SMNDC1-204ENST00000471297 F8W031 263 aaPredicted RBP7.09□□□□□ -1.27
SMNDC1-204ENST00000471297 STX6O43752 255 aa7.09□□□□□ -1.27
SMNDC1-204ENST00000471297 CDKL5O76039 1030 aa7.09□□□□□ -1.27
SMNDC1-204ENST00000471297 VIL1P09327 827 aaKnown RBP7.09□□□□□ -1.27
SMNDC1-204ENST00000471297 SYT1P21579 422 aa7.09□□□□□ -1.27
SMNDC1-204ENST00000471297 CRKP46108 304 aa7.09□□□□□ -1.27
SMNDC1-204ENST00000471297 DNM1Q05193 864 aaKnown RBP7.09□□□□□ -1.27
SMNDC1-204ENST00000471297 SPEM2Q0P670 501 aa7.09□□□□□ -1.27
SMNDC1-204ENST00000471297 CCINQ13939 588 aa7.09□□□□□ -1.27
SMNDC1-204ENST00000471297 PPP2R5BQ15173 497 aa7.09□□□□□ -1.27
SMNDC1-204ENST00000471297 TTC6Q86TZ1 520 aa7.09□□□□□ -1.27
SMNDC1-204ENST00000471297 NIM1KQ8IY84 436 aa7.09□□□□□ -1.27
SMNDC1-204ENST00000471297 ZNF444Q8N0Y2 327 aaPredicted RBP7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms