RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 FRS2Q8WU20 508 aa8.14□□□□□ -1.11
PRPF40A-206ENST00000471167 CLEC1BQ9P126 229 aa8.14□□□□□ -1.11
PRPF40A-206ENST00000471167 TMEFF2Q9UIK5 374 aaPredicted RBP8.14□□□□□ -1.11
PRPF40A-206ENST00000471167 PCDHA5Q9Y5H7 936 aa8.14□□□□□ -1.11
PRPF40A-206ENST00000471167 C7orf72A4D263 438 aa8.13□□□□□ -1.11
PRPF40A-206ENST00000471167 SRGAP3O43295 1099 aa8.13□□□□□ -1.11
PRPF40A-206ENST00000471167 THBDP07204 575 aa8.13□□□□□ -1.11
PRPF40A-206ENST00000471167 GLI4P10075 376 aa8.13□□□□□ -1.11
PRPF40A-206ENST00000471167 PLS3P13797 630 aa8.13□□□□□ -1.11
PRPF40A-206ENST00000471167 NCKAP1LP55160 1127 aa8.13□□□□□ -1.11
PRPF40A-206ENST00000471167 CORO7P57737 925 aa8.13□□□□□ -1.11
PRPF40A-206ENST00000471167 GNL2Q13823 731 aaKnown RBP8.13□□□□□ -1.11
PRPF40A-206ENST00000471167 TMEM132EQ6IEE7 984 aa8.13□□□□□ -1.11
PRPF40A-206ENST00000471167 DENND5AQ6IQ26 1287 aa8.13□□□□□ -1.11
PRPF40A-206ENST00000471167 AMIGO3Q86WK7 504 aa8.13□□□□□ -1.11
PRPF40A-206ENST00000471167 LDHDQ86WU2 507 aa8.13□□□□□ -1.11
PRPF40A-206ENST00000471167 ZNF227Q86WZ6 799 aa8.13□□□□□ -1.11
PRPF40A-206ENST00000471167 CCDC103Q8IW40 242 aa8.13□□□□□ -1.11
PRPF40A-206ENST00000471167 KREMEN2Q8NCW0 462 aa8.13□□□□□ -1.11
PRPF40A-206ENST00000471167 NPLOC4Q8TAT6 608 aa8.13□□□□□ -1.11
PRPF40A-206ENST00000471167 BTN2A2Q8WVV5 523 aa8.13□□□□□ -1.11
PRPF40A-206ENST00000471167 NKX2-4Q9H2Z4 354 aa8.13□□□□□ -1.11
PRPF40A-206ENST00000471167 RXFP1Q9HBX9 757 aa8.13□□□□□ -1.11
PRPF40A-206ENST00000471167 CYP26B1Q9NR63 512 aa8.13□□□□□ -1.11
PRPF40A-206ENST00000471167 N4BP3O15049 544 aa8.12□□□□□ -1.11
PRPF40A-206ENST00000471167 DDAH1O94760 285 aa8.12□□□□□ -1.11
PRPF40A-206ENST00000471167 ARL4AP40617 200 aa8.12□□□□□ -1.11
PRPF40A-206ENST00000471167 SEPHS1P49903 392 aa8.12□□□□□ -1.11
PRPF40A-206ENST00000471167 ANKS3Q6ZW76 656 aa8.12□□□□□ -1.11
PRPF40A-206ENST00000471167 TMC6Q7Z403 805 aa8.12□□□□□ -1.11
PRPF40A-206ENST00000471167 TOX2Q96NM4 488 aa8.12□□□□□ -1.11
PRPF40A-206ENST00000471167 GULP1Q9UBP9 304 aa8.12□□□□□ -1.11
PRPF40A-206ENST00000471167 RWDD3Q9Y3V2 267 aa8.12□□□□□ -1.11
PRPF40A-206ENST00000471167 GRIA2P42262 883 aa8.11□□□□□ -1.11
PRPF40A-206ENST00000471167 MAPKAPK2P49137 400 aa8.11□□□□□ -1.11
PRPF40A-206ENST00000471167 MZB1Q8WU39 189 aa8.11□□□□□ -1.11
PRPF40A-206ENST00000471167 IRF2BPLQ9H1B7 796 aa8.11□□□□□ -1.11
PRPF40A-206ENST00000471167 ST7Q9NRC1 585 aa8.11□□□□□ -1.11
PRPF40A-206ENST00000471167 SIRT5Q9NXA8 310 aa8.11□□□□□ -1.11
PRPF40A-206ENST00000471167 NPHP3-ACAD11A0A0J9YXS1 232 aa8.1□□□□□ -1.11
PRPF40A-206ENST00000471167 ZC3H12DA2A288 527 aaKnown RBP8.1□□□□□ -1.11
PRPF40A-206ENST00000471167 CYBBP04839 570 aa8.1□□□□□ -1.11
PRPF40A-206ENST00000471167 ZSCAN22P10073 491 aaPredicted RBP8.1□□□□□ -1.11
PRPF40A-206ENST00000471167 IGFBP6P24592 240 aaPredicted RBP8.1□□□□□ -1.11
PRPF40A-206ENST00000471167 FXNQ16595 210 aa8.1□□□□□ -1.11
PRPF40A-206ENST00000471167 PRSS53Q2L4Q9 553 aa8.1□□□□□ -1.11
PRPF40A-206ENST00000471167 SLC10A6Q3KNW5 377 aa8.1□□□□□ -1.11
PRPF40A-206ENST00000471167 FBLN7Q53RD9 439 aa8.1□□□□□ -1.11
PRPF40A-206ENST00000471167 PAQR3Q6TCH7 311 aa8.1□□□□□ -1.11
PRPF40A-206ENST00000471167 PLEKHO2Q8TD55 490 aa8.1□□□□□ -1.11
PRPF40A-206ENST00000471167 C1orf159Q96HA4 380 aa8.1□□□□□ -1.11
PRPF40A-206ENST00000471167 MMP19Q99542 508 aa8.1□□□□□ -1.11
PRPF40A-206ENST00000471167 KCTD3Q9Y597 815 aa8.1□□□□□ -1.11
PRPF40A-206ENST00000471167 ABLIM1O14639 778 aa8.09□□□□□ -1.11
PRPF40A-206ENST00000471167 PAMP19021 973 aa8.09□□□□□ -1.11
PRPF40A-206ENST00000471167 PI3P19957 117 aa8.09□□□□□ -1.11
PRPF40A-206ENST00000471167 ZNF200P98182 395 aaPredicted RBP8.09□□□□□ -1.11
PRPF40A-206ENST00000471167 KRTAP19-4Q3LI73 84 aa8.09□□□□□ -1.11
PRPF40A-206ENST00000471167 SV2CQ496J9 727 aa8.09□□□□□ -1.11
PRPF40A-206ENST00000471167 BICRALQ6AI39 1079 aa8.09□□□□□ -1.11
PRPF40A-206ENST00000471167 A0A1W2PQ27 194 aa8.08□□□□□ -1.12
PRPF40A-206ENST00000471167 A0A1W2PQ64 194 aa8.08□□□□□ -1.12
PRPF40A-206ENST00000471167 A0A1W2PQC6 194 aa8.08□□□□□ -1.12
PRPF40A-206ENST00000471167 A0A1W2PQD8 194 aa8.08□□□□□ -1.12
PRPF40A-206ENST00000471167 SCG5P05408 212 aa8.08□□□□□ -1.12
PRPF40A-206ENST00000471167 PRR5P85299 388 aa8.08□□□□□ -1.12
PRPF40A-206ENST00000471167 NAALADL2Q58DX5 795 aa8.08□□□□□ -1.12
PRPF40A-206ENST00000471167 DACT3Q96B18 629 aaPredicted RBP8.08□□□□□ -1.12
PRPF40A-206ENST00000471167 SIGLEC10Q96LC7 697 aa8.08□□□□□ -1.12
PRPF40A-206ENST00000471167 BCAS3Q9H6U6 928 aa8.08□□□□□ -1.12
PRPF40A-206ENST00000471167 FBXL7Q9UJT9 491 aa8.08□□□□□ -1.12
PRPF40A-206ENST00000471167 CNOT6Q9ULM6 557 aaKnown RBP8.08□□□□□ -1.12
PRPF40A-206ENST00000471167 A0A1W2PQU0 124 aa8.07□□□□□ -1.12
PRPF40A-206ENST00000471167 F8W031 263 aaPredicted RBP8.07□□□□□ -1.12
PRPF40A-206ENST00000471167 NOP56O00567 594 aaKnown RBP8.07□□□□□ -1.12
PRPF40A-206ENST00000471167 NUAK1O60285 661 aa8.07□□□□□ -1.12
PRPF40A-206ENST00000471167 ATF2P15336 505 aa8.07□□□□□ -1.12
PRPF40A-206ENST00000471167 NR1I3Q14994 352 aa8.07□□□□□ -1.12
PRPF40A-206ENST00000471167 DDR2Q16832 855 aa8.07□□□□□ -1.12
PRPF40A-206ENST00000471167 POMZP3Q6PJE2 187 aa8.07□□□□□ -1.12
PRPF40A-206ENST00000471167 SIAH1Q8IUQ4 282 aa8.07□□□□□ -1.12
PRPF40A-206ENST00000471167 LZTR1Q8N653 840 aa8.07□□□□□ -1.12
PRPF40A-206ENST00000471167 PPP1R14AQ96A00 147 aa8.07□□□□□ -1.12
PRPF40A-206ENST00000471167 KRTAP9-7A8MTY7 169 aa8.06□□□□□ -1.12
PRPF40A-206ENST00000471167 GFRA1P56159 465 aa8.06□□□□□ -1.12
PRPF40A-206ENST00000471167 ZC3H14Q6PJT7 736 aaKnown RBP8.06□□□□□ -1.12
PRPF40A-206ENST00000471167 FAM129CQ86XR2 697 aa8.06□□□□□ -1.12
PRPF40A-206ENST00000471167 SIT1Q9Y3P8 196 aa8.06□□□□□ -1.12
PRPF40A-206ENST00000471167 NAT2P11245 290 aa8.05□□□□□ -1.12
PRPF40A-206ENST00000471167 HOXC12P31275 282 aa8.05□□□□□ -1.12
PRPF40A-206ENST00000471167 TESK1Q15569 626 aa8.05□□□□□ -1.12
PRPF40A-206ENST00000471167 CIAPIN1Q6FI81 312 aa8.05□□□□□ -1.12
PRPF40A-206ENST00000471167 NLRP10Q86W26 655 aa8.05□□□□□ -1.12
PRPF40A-206ENST00000471167 TMEM145Q8NBT3 493 aa8.05□□□□□ -1.12
PRPF40A-206ENST00000471167 IRAK3Q9Y616 596 aa8.05□□□□□ -1.12
PRPF40A-206ENST00000471167 FUCA1P04066 466 aa8.04□□□□□ -1.12
PRPF40A-206ENST00000471167 LCP1P13796 627 aa8.04□□□□□ -1.12
PRPF40A-206ENST00000471167 MC3RP41968 323 aa8.04□□□□□ -1.12
PRPF40A-206ENST00000471167 ZC3H6P61129 1189 aaKnown RBP8.04□□□□□ -1.12
PRPF40A-206ENST00000471167 RAB33AQ14088 237 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms