RNA–Protein interactions for RNA: ENST00000470687.1

UBXN4-206, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-206ENST00000470687 FAM86C2PA6NEL3 165 aa4.15□□□□□ -1.75
UBXN4-206ENST00000470687 WTIPA6NIX2 430 aaPredicted RBP4.15□□□□□ -1.75
UBXN4-206ENST00000470687 SYPP08247 313 aa4.15□□□□□ -1.75
UBXN4-206ENST00000470687 MSL3P1P0C860 447 aa4.15□□□□□ -1.75
UBXN4-206ENST00000470687 PRKCAP17252 672 aa4.15□□□□□ -1.75
UBXN4-206ENST00000470687 PFKLP17858 780 aa4.15□□□□□ -1.75
UBXN4-206ENST00000470687 MCM4P33991 863 aa4.15□□□□□ -1.75
UBXN4-206ENST00000470687 CASP7P55210 303 aa4.15□□□□□ -1.75
UBXN4-206ENST00000470687 PLEKHN1Q494U1 663 aaPredicted RBP4.15□□□□□ -1.75
UBXN4-206ENST00000470687 INTS3Q68E01 1043 aaKnown RBP4.15□□□□□ -1.75
UBXN4-206ENST00000470687 CYB5RLQ6IPT4 315 aa4.15□□□□□ -1.75
UBXN4-206ENST00000470687 NLRC3Q7RTR2 1065 aa4.15□□□□□ -1.75
UBXN4-206ENST00000470687 TMC3Q7Z5M5 1100 aa4.15□□□□□ -1.75
UBXN4-206ENST00000470687 SLCO6A1Q86UG4 719 aa4.15□□□□□ -1.75
UBXN4-206ENST00000470687 ADGRG2Q8IZP9 1017 aa4.15□□□□□ -1.75
UBXN4-206ENST00000470687 TAB3Q8N5C8 712 aaPredicted RBP4.15□□□□□ -1.75
UBXN4-206ENST00000470687 ZNF512BQ96KM6 892 aaPredicted RBP4.15□□□□□ -1.75
UBXN4-206ENST00000470687 SORCS2Q96PQ0 1159 aa4.15□□□□□ -1.75
UBXN4-206ENST00000470687 KRTAP3-1Q9BYR8 98 aa4.15□□□□□ -1.75
UBXN4-206ENST00000470687 KANSL2Q9H9L4 492 aa4.15□□□□□ -1.75
UBXN4-206ENST00000470687 GMIPQ9P107 970 aa4.15□□□□□ -1.75
UBXN4-206ENST00000470687 MSRB2Q9Y3D2 182 aa4.15□□□□□ -1.75
UBXN4-206ENST00000470687 FAM221BA6H8Z2 402 aa4.14□□□□□ -1.75
UBXN4-206ENST00000470687 C1QTNF3-AMACRE9PGA6 284 aa4.14□□□□□ -1.75
UBXN4-206ENST00000470687 FSHBP01225 129 aa4.14□□□□□ -1.75
UBXN4-206ENST00000470687 PLA2G1BP04054 148 aaKnown RBP4.14□□□□□ -1.75
UBXN4-206ENST00000470687 ITGB3P05106 788 aa4.14□□□□□ -1.75
UBXN4-206ENST00000470687 ZNF165P49910 485 aa4.14□□□□□ -1.75
UBXN4-206ENST00000470687 ZNF200P98182 395 aaPredicted RBP4.14□□□□□ -1.75
UBXN4-206ENST00000470687 CYP4F8P98187 520 aa4.14□□□□□ -1.75
UBXN4-206ENST00000470687 ARID5AQ03989 594 aa4.14□□□□□ -1.75
UBXN4-206ENST00000470687 AXDND1Q5T1B0 1012 aaPredicted RBP4.14□□□□□ -1.75
UBXN4-206ENST00000470687 NBPF12Q5TAG4 269 aaPredicted RBP4.14□□□□□ -1.75
UBXN4-206ENST00000470687 PHACTR4Q8IZ21 702 aa4.14□□□□□ -1.75
UBXN4-206ENST00000470687 FNIP1Q8TF40 1166 aa4.14□□□□□ -1.75
UBXN4-206ENST00000470687 ACSL6Q9UKU0 697 aa4.14□□□□□ -1.75
UBXN4-206ENST00000470687 DUSP10Q9Y6W6 482 aa4.14□□□□□ -1.75
UBXN4-206ENST00000470687 MAGI1Q96QZ7 1491 aaPredicted RBP4.13□□□□□ -1.75
UBXN4-206ENST00000470687 LOC105371045A0A1W2PR82 267 aa4.13□□□□□ -1.75
UBXN4-206ENST00000470687 BPNT1O95861 308 aa4.13□□□□□ -1.75
UBXN4-206ENST00000470687 FBLN1P23142 703 aa4.13□□□□□ -1.75
UBXN4-206ENST00000470687 GUCY2CP25092 1073 aa4.13□□□□□ -1.75
UBXN4-206ENST00000470687 CNR2P34972 360 aa4.13□□□□□ -1.75
UBXN4-206ENST00000470687 MAPKAPK2P49137 400 aa4.13□□□□□ -1.75
UBXN4-206ENST00000470687 RNF4P78317 190 aa4.13□□□□□ -1.75
UBXN4-206ENST00000470687 COL9A2Q14055 689 aaPredicted RBP4.13□□□□□ -1.75
UBXN4-206ENST00000470687 TDRD10Q5VZ19 366 aaKnown RBP4.13□□□□□ -1.75
UBXN4-206ENST00000470687 ZC3H14Q6PJT7 736 aaKnown RBP4.13□□□□□ -1.75
UBXN4-206ENST00000470687 SAPCD2Q86UD0 394 aa4.13□□□□□ -1.75
UBXN4-206ENST00000470687 NUP43Q8NFH3 380 aa4.13□□□□□ -1.75
UBXN4-206ENST00000470687 SLC6A18Q96N87 628 aa4.13□□□□□ -1.75
UBXN4-206ENST00000470687 RBM15Q96T37 977 aaKnown RBP eCLIP4.13□□□□□ -1.75
UBXN4-206ENST00000470687 MCMBPQ9BTE3 642 aa4.13□□□□□ -1.75
UBXN4-206ENST00000470687 ERVK13-1Q9NX77 482 aa4.13□□□□□ -1.75
UBXN4-206ENST00000470687 ZNF214Q9UL59 606 aaPredicted RBP4.13□□□□□ -1.75
UBXN4-206ENST00000470687 AQRO60306 1485 aaKnown RBP eCLIP4.12□□□□□ -1.75
UBXN4-206ENST00000470687 ARHGEF11O15085 1522 aa4.12□□□□□ -1.75
UBXN4-206ENST00000470687 ZNF608Q9ULD9 1512 aaPredicted RBP4.12□□□□□ -1.75
UBXN4-206ENST00000470687 A0A1W2PQ45 241 aaPredicted RBP4.12□□□□□ -1.75
UBXN4-206ENST00000470687 A0A1W2PQY0 241 aa4.12□□□□□ -1.75
UBXN4-206ENST00000470687 SH3D21A4FU49 640 aa4.12□□□□□ -1.75
UBXN4-206ENST00000470687 TBX1O43435 398 aa4.12□□□□□ -1.75
UBXN4-206ENST00000470687 PRAMEF1O95521 474 aa4.12□□□□□ -1.75
UBXN4-206ENST00000470687 GBP1P32455 592 aa4.12□□□□□ -1.75
UBXN4-206ENST00000470687 CTSKP43235 329 aa4.12□□□□□ -1.75
UBXN4-206ENST00000470687 EIF6P56537 245 aaKnown RBP4.12□□□□□ -1.75
UBXN4-206ENST00000470687 CHMP4BP1P59074 171 aa4.12□□□□□ -1.75
UBXN4-206ENST00000470687 HTRA3P83110 453 aa4.12□□□□□ -1.75
UBXN4-206ENST00000470687 RASA3Q14644 834 aa4.12□□□□□ -1.75
UBXN4-206ENST00000470687 NBPF9Q3BBW0 867 aa4.12□□□□□ -1.75
UBXN4-206ENST00000470687 DCAF15Q66K64 600 aa4.12□□□□□ -1.75
UBXN4-206ENST00000470687 CPZQ66K79 652 aa4.12□□□□□ -1.75
UBXN4-206ENST00000470687 DIEXFQ68CQ4 756 aaKnown RBP4.12□□□□□ -1.75
UBXN4-206ENST00000470687 ANKS3Q6ZW76 656 aa4.12□□□□□ -1.75
UBXN4-206ENST00000470687 ANAPC16Q96DE5 110 aa4.12□□□□□ -1.75
UBXN4-206ENST00000470687 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.12□□□□□ -1.751e-6■□□□□ 9.7
UBXN4-206ENST00000470687 C1QTNF3Q9BXJ4 246 aa4.12□□□□□ -1.75
UBXN4-206ENST00000470687 TANGO6Q9C0B7 1094 aa4.12□□□□□ -1.75
UBXN4-206ENST00000470687 LNPKQ9C0E8 428 aa4.12□□□□□ -1.75
UBXN4-206ENST00000470687 PRDM14Q9GZV8 571 aa4.12□□□□□ -1.75
UBXN4-206ENST00000470687 SCAND2PQ9GZW5 306 aaPredicted RBP4.12□□□□□ -1.75
UBXN4-206ENST00000470687 APEX2Q9UBZ4 518 aa4.12□□□□□ -1.75
UBXN4-206ENST00000470687 PRKAG3Q9UGI9 489 aa4.12□□□□□ -1.75
UBXN4-206ENST00000470687 PMF1-BGLAPU3KQ54 211 aa4.12□□□□□ -1.75
UBXN4-206ENST00000470687 POLA1P09884 1462 aaPredicted RBP4.11□□□□□ -1.75
UBXN4-206ENST00000470687 GRIN2BQ13224 1484 aa4.11□□□□□ -1.75
UBXN4-206ENST00000470687 TARBP1Q13395 1621 aaKnown RBP4.11□□□□□ -1.75
UBXN4-206ENST00000470687 SIGLEC6O43699 453 aa4.11□□□□□ -1.75
UBXN4-206ENST00000470687 NOBOXO60393 691 aa4.11□□□□□ -1.75
UBXN4-206ENST00000470687 ZNF20P17024 532 aa4.11□□□□□ -1.75
UBXN4-206ENST00000470687 HMGA2P52926 109 aa4.11□□□□□ -1.75
UBXN4-206ENST00000470687 FOXO4P98177 505 aa4.11□□□□□ -1.75
UBXN4-206ENST00000470687 DLX2Q07687 328 aaPredicted RBP4.11□□□□□ -1.75
UBXN4-206ENST00000470687 NR1I3Q14994 352 aa4.11□□□□□ -1.75
UBXN4-206ENST00000470687 TARBP2Q15633 366 aaKnown RBP4.11□□□□□ -1.75
UBXN4-206ENST00000470687 C19orf47Q8N9M1 422 aaKnown RBP4.11□□□□□ -1.75
UBXN4-206ENST00000470687 ZNF526Q8TF50 670 aaPredicted RBP4.11□□□□□ -1.75
UBXN4-206ENST00000470687 SREK1Q8WXA9 508 aaKnown RBP4.11□□□□□ -1.75
UBXN4-206ENST00000470687 DDX1Q92499 740 aaKnown RBP4.11□□□□□ -1.75
UBXN4-206ENST00000470687 FERD3LQ96RJ6 166 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms