RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 NFIBO00712 420 aa9.48□□□□□ -0.89
GTF3A-206ENST00000470606 FOXN1O15353 648 aa9.48□□□□□ -0.89
GTF3A-206ENST00000470606 ICAM1P05362 532 aa9.48□□□□□ -0.89
GTF3A-206ENST00000470606 LONRF3Q496Y0 759 aa9.48□□□□□ -0.89
GTF3A-206ENST00000470606 MUM1L1Q5H9M0 696 aa9.48□□□□□ -0.89
GTF3A-206ENST00000470606 CATSPERGQ6ZRH7 1159 aa9.48□□□□□ -0.89
GTF3A-206ENST00000470606 CCDC73Q6ZRK6 1079 aa9.48□□□□□ -0.89
GTF3A-206ENST00000470606 CPXCR1Q8N123 301 aa9.48□□□□□ -0.89
GTF3A-206ENST00000470606 LRRC15Q8TF66 581 aa9.48□□□□□ -0.89
GTF3A-206ENST00000470606 OTUD5Q96G74 571 aa9.48□□□□□ -0.89
GTF3A-206ENST00000470606 MTMR9Q96QG7 549 aa9.48□□□□□ -0.89
GTF3A-206ENST00000470606 ANO3Q9BYT9 981 aa9.48□□□□□ -0.89
GTF3A-206ENST00000470606 COL20A1Q9P218 1284 aa9.48□□□□□ -0.89
GTF3A-206ENST00000470606 KCNH3Q9ULD8 1083 aa9.48□□□□□ -0.89
GTF3A-206ENST00000470606 CEP131Q9UPN4 1083 aa9.48□□□□□ -0.89
GTF3A-206ENST00000470606 IREB2P48200 963 aaKnown RBP9.47□□□□□ -0.89
GTF3A-206ENST00000470606 ARL6IP4Q66PJ3 421 aaKnown RBP9.47□□□□□ -0.89
GTF3A-206ENST00000470606 ANKRD13AQ8IZ07 590 aa9.47□□□□□ -0.89
GTF3A-206ENST00000470606 CYP2W1Q8TAV3 490 aa9.47□□□□□ -0.89
GTF3A-206ENST00000470606 ZNF526Q8TF50 670 aaPredicted RBP9.47□□□□□ -0.89
GTF3A-206ENST00000470606 SYMPKQ92797 1274 aaKnown RBP9.47□□□□□ -0.89
GTF3A-206ENST00000470606 HAS1Q92839 578 aa9.47□□□□□ -0.89
GTF3A-206ENST00000470606 SYAP1Q96A49 352 aaPredicted RBP9.47□□□□□ -0.89
GTF3A-206ENST00000470606 FERMT2Q96AC1 680 aa9.47□□□□□ -0.89
GTF3A-206ENST00000470606 LENG9Q96B70 501 aa9.47□□□□□ -0.89
GTF3A-206ENST00000470606 UIMC1Q96RL1 719 aa9.47□□□□□ -0.89
GTF3A-206ENST00000470606 TNMDQ9H2S6 317 aa9.47□□□□□ -0.89
GTF3A-206ENST00000470606 ZNF214Q9UL59 606 aaPredicted RBP9.47□□□□□ -0.89
GTF3A-206ENST00000470606 CCPG1Q9ULG6 757 aa9.47□□□□□ -0.89
GTF3A-206ENST00000470606 CSADQ9Y600 493 aa9.47□□□□□ -0.89
GTF3A-206ENST00000470606 LCTP09848 1927 aa9.47□□□□□ -0.89
GTF3A-206ENST00000470606 A0A0G2JLL6 359 aaPredicted RBP9.46□□□□□ -0.89
GTF3A-206ENST00000470606 SPDYE16A6NNV3 312 aaPredicted RBP9.46□□□□□ -0.89
GTF3A-206ENST00000470606 CFBP00751 764 aa9.46□□□□□ -0.89
GTF3A-206ENST00000470606 DSG3P32926 999 aa9.46□□□□□ -0.89
GTF3A-206ENST00000470606 DEKP35659 375 aaKnown RBP9.46□□□□□ -0.89
GTF3A-206ENST00000470606 SYKP43405 635 aa9.46□□□□□ -0.89
GTF3A-206ENST00000470606 PPATQ06203 517 aa9.46□□□□□ -0.89
GTF3A-206ENST00000470606 TTLL12Q14166 644 aaPredicted RBP9.46□□□□□ -0.89
GTF3A-206ENST00000470606 PRRT2Q7Z6L0 340 aaPredicted RBP9.46□□□□□ -0.89
GTF3A-206ENST00000470606 FCHSD1Q86WN1 690 aa9.46□□□□□ -0.89
GTF3A-206ENST00000470606 ERO1BQ86YB8 467 aa9.46□□□□□ -0.89
GTF3A-206ENST00000470606 PDILTQ8N807 584 aa9.46□□□□□ -0.89
GTF3A-206ENST00000470606 PURBQ96QR8 312 aaKnown RBP9.46□□□□□ -0.89
GTF3A-206ENST00000470606 R3HDMLQ9H3Y0 253 aa9.46□□□□□ -0.89
GTF3A-206ENST00000470606 ZNF408Q9H9D4 720 aa9.46□□□□□ -0.89
GTF3A-206ENST00000470606 HOMER2Q9NSB8 354 aa9.46□□□□□ -0.89
GTF3A-206ENST00000470606 A0A0G2JMZ2 1700 aa9.46□□□□□ -0.89
GTF3A-206ENST00000470606 RBBP6Q7Z6E9 1792 aaKnown RBP9.46□□□□□ -0.89
GTF3A-206ENST00000470606 FAM86B1E9PN63 330 aa9.46□□□□□ -0.9
GTF3A-206ENST00000470606 POLR2DO15514 142 aaKnown RBP9.46□□□□□ -0.9
GTF3A-206ENST00000470606 ACTN4O43707 911 aaKnown RBP9.46□□□□□ -0.9
GTF3A-206ENST00000470606 NEMFO60524 1076 aa9.46□□□□□ -0.9
GTF3A-206ENST00000470606 BMP15O95972 392 aa9.46□□□□□ -0.9
GTF3A-206ENST00000470606 FAM86B2P0C5J1 330 aa9.46□□□□□ -0.9
GTF3A-206ENST00000470606 XRCC6P12956 609 aaKnown RBP eCLIP9.46□□□□□ -0.9
GTF3A-206ENST00000470606 NF2P35240 595 aa9.46□□□□□ -0.9
GTF3A-206ENST00000470606 SREBF1P36956 1147 aa9.46□□□□□ -0.9
GTF3A-206ENST00000470606 ARHGAP4P98171 946 aa9.46□□□□□ -0.9
GTF3A-206ENST00000470606 MDM2Q00987 491 aaPredicted RBP9.46□□□□□ -0.9
GTF3A-206ENST00000470606 COG2Q14746 738 aa9.46□□□□□ -0.9
GTF3A-206ENST00000470606 TMEM132BQ14DG7 1078 aa9.46□□□□□ -0.9
GTF3A-206ENST00000470606 E2F4Q16254 413 aa9.46□□□□□ -0.9
GTF3A-206ENST00000470606 CST9Q5W186 159 aa9.46□□□□□ -0.9
GTF3A-206ENST00000470606 PPP4R3AQ6IN85 833 aa9.46□□□□□ -0.9
GTF3A-206ENST00000470606 OPTNQ96CV9 577 aa9.46□□□□□ -0.9
GTF3A-206ENST00000470606 ZFP91Q96JP5 570 aaPredicted RBP9.46□□□□□ -0.9
GTF3A-206ENST00000470606 MBOAT7Q96N66 472 aa9.46□□□□□ -0.9
GTF3A-206ENST00000470606 MTRQ99707 1265 aa9.46□□□□□ -0.9
GTF3A-206ENST00000470606 KCNH4Q9UQ05 1017 aa9.46□□□□□ -0.9
GTF3A-206ENST00000470606 CENPFP49454 3210 aa9.46□□□□□ -0.9
GTF3A-206ENST00000470606 KINO60870 393 aaKnown RBP9.45□□□□□ -0.9
GTF3A-206ENST00000470606 ITGBL1O95965 494 aaPredicted RBP9.45□□□□□ -0.9
GTF3A-206ENST00000470606 OR52Z1P0C646 297 aa9.45□□□□□ -0.9
GTF3A-206ENST00000470606 ALAS1P13196 640 aa9.45□□□□□ -0.9
GTF3A-206ENST00000470606 HSD17B4P51659 736 aa9.45□□□□□ -0.9
GTF3A-206ENST00000470606 UBXN2AP68543 259 aa9.45□□□□□ -0.9
GTF3A-206ENST00000470606 GHRHRQ02643 423 aa9.45□□□□□ -0.9
GTF3A-206ENST00000470606 AP3B2Q13367 1082 aa9.45□□□□□ -0.9
GTF3A-206ENST00000470606 GRAMD1CQ8IYS0 662 aa9.45□□□□□ -0.9
GTF3A-206ENST00000470606 RBM46Q8TBY0 533 aaKnown RBP9.45□□□□□ -0.9
GTF3A-206ENST00000470606 MMTAG2Q9BU76 263 aaKnown RBP9.45□□□□□ -0.9
GTF3A-206ENST00000470606 ABCB11O95342 1321 aa9.45□□□□□ -0.9
GTF3A-206ENST00000470606 IGLV3-22A0A075B6J6 115 aa9.44□□□□□ -0.9
GTF3A-206ENST00000470606 CYP3A7-CYP3A51PA0A087WV96 503 aa9.44□□□□□ -0.9
GTF3A-206ENST00000470606 GOLGA6L3A6NEY3 463 aa9.44□□□□□ -0.9
GTF3A-206ENST00000470606 PRR29P0C7W0 189 aa9.44□□□□□ -0.9
GTF3A-206ENST00000470606 CYP3A7P24462 503 aa9.44□□□□□ -0.9
GTF3A-206ENST00000470606 PRPHP41219 470 aa9.44□□□□□ -0.9
GTF3A-206ENST00000470606 TYRO3Q06418 890 aa9.44□□□□□ -0.9
GTF3A-206ENST00000470606 PPIL2Q13356 520 aa9.44□□□□□ -0.9
GTF3A-206ENST00000470606 NAALADL2Q58DX5 795 aa9.44□□□□□ -0.9
GTF3A-206ENST00000470606 SLC30A10Q6XR72 485 aa9.44□□□□□ -0.9
GTF3A-206ENST00000470606 KRBA2Q6ZNG9 492 aa9.44□□□□□ -0.9
GTF3A-206ENST00000470606 IGSF22Q8N9C0 903 aa9.44□□□□□ -0.9
GTF3A-206ENST00000470606 RNF214Q8ND24 703 aa9.44□□□□□ -0.9
GTF3A-206ENST00000470606 IL31RAQ8NI17 732 aa9.44□□□□□ -0.9
GTF3A-206ENST00000470606 NUDT12Q9BQG2 462 aa9.44□□□□□ -0.9
GTF3A-206ENST00000470606 GLT8D2Q9H1C3 349 aa9.44□□□□□ -0.9
GTF3A-206ENST00000470606 GRPEL1Q9HAV7 217 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms