RNA–Protein interactions for RNA: ENST00000470482.5

HDLBP-232, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-232ENST00000470482 SHHQ15465 462 aa13.74□□□□□ -0.21
HDLBP-232ENST00000470482 DUSP28Q4G0W2 176 aa13.74□□□□□ -0.21
HDLBP-232ENST00000470482 ASPRV1Q53RT3 343 aa13.74□□□□□ -0.21
HDLBP-232ENST00000470482 GNASQ5JWF2 1037 aa13.74□□□□□ -0.21
HDLBP-232ENST00000470482 C9orf50Q5SZB4 431 aa13.74□□□□□ -0.21
HDLBP-232ENST00000470482 FAM109BQ6ICB4 259 aaPredicted RBP13.74□□□□□ -0.21
HDLBP-232ENST00000470482 FAM126BQ8IXS8 530 aa13.74□□□□□ -0.21
HDLBP-232ENST00000470482 PCSK9Q8NBP7 692 aaKnown RBP13.74□□□□□ -0.21
HDLBP-232ENST00000470482 IGDCC4Q8TDY8 1250 aa13.74□□□□□ -0.21
HDLBP-232ENST00000470482 NUP133Q8WUM0 1156 aa13.74□□□□□ -0.21
HDLBP-232ENST00000470482 VWCEQ96DN2 955 aa13.74□□□□□ -0.21
HDLBP-232ENST00000470482 COL20A1Q9P218 1284 aa13.74□□□□□ -0.21
HDLBP-232ENST00000470482 MAD2L2Q9UI95 211 aa13.74□□□□□ -0.21
HDLBP-232ENST00000470482 ARVCFO00192 962 aa13.73□□□□□ -0.21
HDLBP-232ENST00000470482 C6orf222P0C671 652 aaPredicted RBP13.73□□□□□ -0.21
HDLBP-232ENST00000470482 BEX3Q00994 111 aa13.73□□□□□ -0.21
HDLBP-232ENST00000470482 TROAPQ12815 778 aa13.73□□□□□ -0.21
HDLBP-232ENST00000470482 CCDC62Q6P9F0 684 aa13.73□□□□□ -0.21
HDLBP-232ENST00000470482 RNF207Q6ZRF8 634 aa13.73□□□□□ -0.21
HDLBP-232ENST00000470482 C16orf59Q7L2K0 433 aa13.73□□□□□ -0.21
HDLBP-232ENST00000470482 FBXO16Q8IX29 292 aaPredicted RBP13.73□□□□□ -0.21
HDLBP-232ENST00000470482 DNERQ8NFT8 737 aa13.73□□□□□ -0.21
HDLBP-232ENST00000470482 LSG1Q9H089 658 aaKnown RBP13.73□□□□□ -0.21
HDLBP-232ENST00000470482 KAT14Q9H8E8 782 aa13.73□□□□□ -0.21
HDLBP-232ENST00000470482 STARD7Q9NQZ5 370 aa13.73□□□□□ -0.21
HDLBP-232ENST00000470482 MTMR10Q9NXD2 777 aa13.73□□□□□ -0.21
HDLBP-232ENST00000470482 ADD3Q9UEY8 706 aaKnown RBP13.73□□□□□ -0.21
HDLBP-232ENST00000470482 ISY1Q9ULR0 285 aaKnown RBP13.73□□□□□ -0.21
HDLBP-232ENST00000470482 U3KPZ7 1027 aaPredicted RBP13.73□□□□□ -0.21
HDLBP-232ENST00000470482 E7EWF7 191 aa13.72□□□□□ -0.21
HDLBP-232ENST00000470482 DYNC1LI2O43237 492 aaPredicted RBP13.72□□□□□ -0.21
HDLBP-232ENST00000470482 CYTH3O43739 400 aa13.72□□□□□ -0.21
HDLBP-232ENST00000470482 MYCNP04198 464 aaPredicted RBP13.72□□□□□ -0.21
HDLBP-232ENST00000470482 CDC37Q16543 378 aaPredicted RBP13.72□□□□□ -0.21
HDLBP-232ENST00000470482 QRICH1Q2TAL8 776 aa13.72□□□□□ -0.21
HDLBP-232ENST00000470482 RASIP1Q5U651 963 aa13.72□□□□□ -0.21
HDLBP-232ENST00000470482 TLK2Q86UE8 772 aa13.72□□□□□ -0.21
HDLBP-232ENST00000470482 MB21D2Q8IYB1 491 aaPredicted RBP13.72□□□□□ -0.21
HDLBP-232ENST00000470482 SYTL5Q8TDW5 730 aaPredicted RBP13.72□□□□□ -0.21
HDLBP-232ENST00000470482 RUFY2Q8WXA3 655 aa13.72□□□□□ -0.21
HDLBP-232ENST00000470482 LBHD1Q9BQE6 289 aaPredicted RBP13.72□□□□□ -0.21
HDLBP-232ENST00000470482 RIOX1Q9H6W3 641 aa13.72□□□□□ -0.21
HDLBP-232ENST00000470482 PQBP1O60828 265 aaKnown RBP13.71□□□□□ -0.21
HDLBP-232ENST00000470482 TIMP1P01033 207 aa13.71□□□□□ -0.21
HDLBP-232ENST00000470482 GRM4Q14833 912 aa13.71□□□□□ -0.21
HDLBP-232ENST00000470482 FSCN1Q16658 493 aaKnown RBP13.71□□□□□ -0.21
HDLBP-232ENST00000470482 CXCL17Q6UXB2 119 aa13.71□□□□□ -0.21
HDLBP-232ENST00000470482 EEPD1Q7L9B9 569 aa13.71□□□□□ -0.21
HDLBP-232ENST00000470482 GLT1D1Q96MS3 346 aa13.71□□□□□ -0.21
HDLBP-232ENST00000470482 TAAR1Q96RJ0 339 aa13.71□□□□□ -0.21
HDLBP-232ENST00000470482 BAZ2BQ9UIF8 2168 aaKnown RBP13.71□□□□□ -0.22
HDLBP-232ENST00000470482 ABCB11O95342 1321 aa13.7□□□□□ -0.22
HDLBP-232ENST00000470482 A0A0U1RQG5 324 aaPredicted RBP13.7□□□□□ -0.22
HDLBP-232ENST00000470482 PTPDC1A2A3K4 754 aa13.7□□□□□ -0.22
HDLBP-232ENST00000470482 A6NJR5 290 aa13.7□□□□□ -0.22
HDLBP-232ENST00000470482 KLRF2D3W0D1 207 aa13.7□□□□□ -0.22
HDLBP-232ENST00000470482 CABYRO75952 493 aa13.7□□□□□ -0.22
HDLBP-232ENST00000470482 ARIH2O95376 493 aa13.7□□□□□ -0.22
HDLBP-232ENST00000470482 PARP1P09874 1014 aaKnown RBP13.7□□□□□ -0.22
HDLBP-232ENST00000470482 HSD17B4P51659 736 aa13.7□□□□□ -0.22
HDLBP-232ENST00000470482 NECTIN1Q15223 517 aa13.7□□□□□ -0.22
HDLBP-232ENST00000470482 IFIT1BQ5T764 474 aaKnown RBP13.7□□□□□ -0.22
HDLBP-232ENST00000470482 KIAA1211Q6ZU35 1233 aa13.7□□□□□ -0.22
HDLBP-232ENST00000470482 Q7L0L9 218 aa13.7□□□□□ -0.22
HDLBP-232ENST00000470482 MTA3Q9BTC8 594 aa13.7□□□□□ -0.22
HDLBP-232ENST00000470482 SEZ6LQ9BYH1 1024 aa13.7□□□□□ -0.22
HDLBP-232ENST00000470482 WDR11Q9BZH6 1224 aa13.7□□□□□ -0.22
HDLBP-232ENST00000470482 SPC25Q9HBM1 224 aa13.7□□□□□ -0.22
HDLBP-232ENST00000470482 TMEM39AQ9NV64 488 aa13.7□□□□□ -0.22
HDLBP-232ENST00000470482 SCN10AQ9Y5Y9 1956 aa13.7□□□□□ -0.22
HDLBP-232ENST00000470482 DCDC2CA8MYV0 355 aa13.69□□□□□ -0.22
HDLBP-232ENST00000470482 CALML3P27482 149 aa13.69□□□□□ -0.22
HDLBP-232ENST00000470482 PURAQ00577 322 aaKnown RBP13.69□□□□□ -0.22
HDLBP-232ENST00000470482 MFSD5Q6N075 450 aa13.69□□□□□ -0.22
HDLBP-232ENST00000470482 SKAP1Q86WV1 359 aa13.69□□□□□ -0.22
HDLBP-232ENST00000470482 DEFB123Q8N688 67 aa13.69□□□□□ -0.22
HDLBP-232ENST00000470482 MAP3K14Q99558 947 aa13.69□□□□□ -0.22
HDLBP-232ENST00000470482 ESYT1Q9BSJ8 1104 aa13.69□□□□□ -0.22
HDLBP-232ENST00000470482 UBAC1Q9BSL1 405 aa13.69□□□□□ -0.22
HDLBP-232ENST00000470482 PRDM5Q9NQX1 630 aaPredicted RBP13.69□□□□□ -0.22
HDLBP-232ENST00000470482 PRKAG2Q9UGJ0 569 aa13.69□□□□□ -0.22
HDLBP-232ENST00000470482 RBM8AQ9Y5S9 174 aaKnown RBP13.69□□□□□ -0.22
HDLBP-232ENST00000470482 MROH7Q68CQ1 1323 aa13.68□□□□□ -0.22
HDLBP-232ENST00000470482 ZBTB5O15062 677 aa13.68□□□□□ -0.22
HDLBP-232ENST00000470482 NKRFO15226 690 aaKnown RBP eCLIP13.68□□□□□ -0.22
HDLBP-232ENST00000470482 RGS20O76081 388 aa13.68□□□□□ -0.22
HDLBP-232ENST00000470482 SMAD3P84022 425 aaKnown RBP13.68□□□□□ -0.22
HDLBP-232ENST00000470482 ITGA7Q13683 1181 aa13.68□□□□□ -0.22
HDLBP-232ENST00000470482 USH1GQ495M9 461 aa13.68□□□□□ -0.22
HDLBP-232ENST00000470482 BMP2KLQ5H9B9 411 aa13.68□□□□□ -0.22
HDLBP-232ENST00000470482 FBXO11Q86XK2 927 aa13.68□□□□□ -0.22
HDLBP-232ENST00000470482 SAMD3Q8N6K7 520 aa13.68□□□□□ -0.22
HDLBP-232ENST00000470482 NCOA7Q8NI08 942 aa13.68□□□□□ -0.22
HDLBP-232ENST00000470482 IWS1Q96ST2 819 aa13.68□□□□□ -0.22
HDLBP-232ENST00000470482 AP5M1Q9H0R1 490 aa13.68□□□□□ -0.22
HDLBP-232ENST00000470482 GPHNQ9NQX3 736 aaPredicted RBP13.68□□□□□ -0.22
HDLBP-232ENST00000470482 MAP3K20Q9NYL2 800 aaKnown RBP13.68□□□□□ -0.22
HDLBP-232ENST00000470482 CHD7Q9P2D1 2997 aa13.68□□□□□ -0.22
HDLBP-232ENST00000470482 CDH23Q9H251 3354 aa13.67□□□□□ -0.22
HDLBP-232ENST00000470482 PRUNE2Q8WUY3 3088 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms