RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 TGS1Q96RS0 853 aaKnown RBP10.61□□□□□ -0.71
SYNGAP1-205ENST00000470232 DNAJC2Q99543 621 aaKnown RBP10.61□□□□□ -0.71
SYNGAP1-205ENST00000470232 MTG1Q9BT17 334 aaPredicted RBP10.61□□□□□ -0.71
SYNGAP1-205ENST00000470232 ZNF287Q9HBT7 754 aa10.61□□□□□ -0.71
SYNGAP1-205ENST00000470232 VTA1Q9NP79 307 aa10.61□□□□□ -0.71
SYNGAP1-205ENST00000470232 HOMER2Q9NSB8 354 aa10.61□□□□□ -0.71
SYNGAP1-205ENST00000470232 CLIP2Q9UDT6 1046 aa10.61□□□□□ -0.71
SYNGAP1-205ENST00000470232 RAD50Q92878 1312 aa10.6□□□□□ -0.71
SYNGAP1-205ENST00000470232 GRXCR2A6NFK2 248 aa10.6□□□□□ -0.71
SYNGAP1-205ENST00000470232 PARNO95453 639 aaKnown RBP10.6□□□□□ -0.71
SYNGAP1-205ENST00000470232 MYL3P08590 195 aa10.6□□□□□ -0.71
SYNGAP1-205ENST00000470232 MS4A1P11836 297 aa10.6□□□□□ -0.71
SYNGAP1-205ENST00000470232 PTPN11Q06124 597 aaPredicted RBP10.6□□□□□ -0.71
SYNGAP1-205ENST00000470232 DUSP28Q4G0W2 176 aa10.6□□□□□ -0.71
SYNGAP1-205ENST00000470232 ZSCAN25Q6NSZ9 544 aa10.6□□□□□ -0.71
SYNGAP1-205ENST00000470232 TAPT1Q6NXT6 567 aa10.6□□□□□ -0.71
SYNGAP1-205ENST00000470232 NFRKBQ6P4R8 1299 aa10.6□□□□□ -0.71
SYNGAP1-205ENST00000470232 RPAP2Q8IXW5 612 aaPredicted RBP10.6□□□□□ -0.71
SYNGAP1-205ENST00000470232 GDPD5Q8WTR4 605 aa10.6□□□□□ -0.71
SYNGAP1-205ENST00000470232 IPO9Q96P70 1041 aaKnown RBP10.6□□□□□ -0.71
SYNGAP1-205ENST00000470232 RAD9AQ99638 391 aa10.6□□□□□ -0.71
SYNGAP1-205ENST00000470232 ARPP21Q9UBL0 812 aaPredicted RBP10.6□□□□□ -0.71
SYNGAP1-205ENST00000470232 PRKAG3Q9UGI9 489 aa10.6□□□□□ -0.71
SYNGAP1-205ENST00000470232 SYNPO2Q9UMS6 1093 aa10.6□□□□□ -0.71
SYNGAP1-205ENST00000470232 SLC4A4Q9Y6R1 1079 aa10.6□□□□□ -0.71
SYNGAP1-205ENST00000470232 CYP2D7A0A087X1C5 515 aa10.59□□□□□ -0.71
SYNGAP1-205ENST00000470232 POTEB3A0JP26 581 aa10.59□□□□□ -0.71
SYNGAP1-205ENST00000470232 SOWAHBA6NEL2 793 aa10.59□□□□□ -0.71
SYNGAP1-205ENST00000470232 ST18O60284 1047 aa10.59□□□□□ -0.71
SYNGAP1-205ENST00000470232 EFCAB14O75071 495 aa10.59□□□□□ -0.71
SYNGAP1-205ENST00000470232 BMP3P12645 472 aa10.59□□□□□ -0.71
SYNGAP1-205ENST00000470232 IL9P15248 144 aa10.59□□□□□ -0.71
SYNGAP1-205ENST00000470232 ADD2P35612 726 aa10.59□□□□□ -0.71
SYNGAP1-205ENST00000470232 ERVK-21P61565 698 aa10.59□□□□□ -0.71
SYNGAP1-205ENST00000470232 FOXK2Q01167 660 aa10.59□□□□□ -0.71
SYNGAP1-205ENST00000470232 IKQ13123 557 aaPredicted RBP10.59□□□□□ -0.71
SYNGAP1-205ENST00000470232 PTPROQ16827 1216 aa10.59□□□□□ -0.71
SYNGAP1-205ENST00000470232 NBPF20Q3BBV1 942 aa10.59□□□□□ -0.71
SYNGAP1-205ENST00000470232 CTR9Q6PD62 1173 aa10.59□□□□□ -0.71
SYNGAP1-205ENST00000470232 POTEBQ6S5H4 581 aa10.59□□□□□ -0.71
SYNGAP1-205ENST00000470232 EEPD1Q7L9B9 569 aa10.59□□□□□ -0.71
SYNGAP1-205ENST00000470232 FAM160B2Q86V87 743 aa10.59□□□□□ -0.71
SYNGAP1-205ENST00000470232 ZNF444Q8N0Y2 327 aaPredicted RBP10.59□□□□□ -0.71
SYNGAP1-205ENST00000470232 CLASRPQ8N2M8 674 aaKnown RBP10.59□□□□□ -0.71
SYNGAP1-205ENST00000470232 MKL1Q969V6 931 aa10.59□□□□□ -0.71
SYNGAP1-205ENST00000470232 TRERF1Q96PN7 1200 aa10.59□□□□□ -0.71
SYNGAP1-205ENST00000470232 PRRX2Q99811 253 aa10.59□□□□□ -0.71
SYNGAP1-205ENST00000470232 WDR11Q9BZH6 1224 aa10.59□□□□□ -0.71
SYNGAP1-205ENST00000470232 A1CFQ9NQ94 594 aaKnown RBP10.59□□□□□ -0.71
SYNGAP1-205ENST00000470232 PDGFCQ9NRA1 345 aa10.59□□□□□ -0.71
SYNGAP1-205ENST00000470232 RNF146Q9NTX7 359 aa10.59□□□□□ -0.71
SYNGAP1-205ENST00000470232 ADD3Q9UEY8 706 aaKnown RBP10.59□□□□□ -0.71
SYNGAP1-205ENST00000470232 ISY1Q9ULR0 285 aaKnown RBP10.59□□□□□ -0.71
SYNGAP1-205ENST00000470232 BAZ2AQ9UIF9 1905 aaKnown RBP10.58□□□□□ -0.72
SYNGAP1-205ENST00000470232 SCN5AQ14524 2016 aa10.58□□□□□ -0.72
SYNGAP1-205ENST00000470232 LOC102724159A0A0B4J2E5 919 aa10.58□□□□□ -0.72
SYNGAP1-205ENST00000470232 NKRFO15226 690 aaKnown RBP eCLIP10.58□□□□□ -0.72
SYNGAP1-205ENST00000470232 ARHGEF15O94989 841 aa10.58□□□□□ -0.72
SYNGAP1-205ENST00000470232 IFIT2P09913 472 aaKnown RBP10.58□□□□□ -0.72
SYNGAP1-205ENST00000470232 STAT2P52630 851 aa10.58□□□□□ -0.72
SYNGAP1-205ENST00000470232 PURAQ00577 322 aaKnown RBP10.58□□□□□ -0.72
SYNGAP1-205ENST00000470232 PWP2Q15269 919 aaKnown RBP10.58□□□□□ -0.72
SYNGAP1-205ENST00000470232 UBE3CQ15386 1083 aa10.58□□□□□ -0.72
SYNGAP1-205ENST00000470232 PKN1Q16512 942 aa10.58□□□□□ -0.72
SYNGAP1-205ENST00000470232 ZKSCAN2Q63HK3 967 aa10.58□□□□□ -0.72
SYNGAP1-205ENST00000470232 FBXO16Q8IX29 292 aaPredicted RBP10.58□□□□□ -0.72
SYNGAP1-205ENST00000470232 TMEM57Q8N5G2 664 aa10.58□□□□□ -0.72
SYNGAP1-205ENST00000470232 GMCL1P1Q8NEA9 526 aa10.58□□□□□ -0.72
SYNGAP1-205ENST00000470232 CAGE1Q8TC20 777 aa10.58□□□□□ -0.72
SYNGAP1-205ENST00000470232 SP7Q8TDD2 431 aaPredicted RBP10.58□□□□□ -0.72
SYNGAP1-205ENST00000470232 AFAP1L1Q8TED9 768 aa10.58□□□□□ -0.72
SYNGAP1-205ENST00000470232 MPHOSPH6Q99547 160 aaKnown RBP10.58□□□□□ -0.72
SYNGAP1-205ENST00000470232 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.58□□□□□ -0.72
SYNGAP1-205ENST00000470232 SUGCTQ9HAC7 445 aa10.58□□□□□ -0.72
SYNGAP1-205ENST00000470232 PAG1Q9NWQ8 432 aa10.58□□□□□ -0.72
SYNGAP1-205ENST00000470232 ZBTB47Q9UFB7 747 aaPredicted RBP10.58□□□□□ -0.72
SYNGAP1-205ENST00000470232 BRWD1Q9NSI6 2320 aa10.58□□□□□ -0.72
SYNGAP1-205ENST00000470232 ABHD14A-ACY1A0A1B0GW23 586 aa10.57□□□□□ -0.72
SYNGAP1-205ENST00000470232 TMEM232C9JQI7 657 aa10.57□□□□□ -0.72
SYNGAP1-205ENST00000470232 TTLL1O95922 423 aa10.57□□□□□ -0.72
SYNGAP1-205ENST00000470232 ALAS1P13196 640 aa10.57□□□□□ -0.72
SYNGAP1-205ENST00000470232 PDE4AP27815 886 aa10.57□□□□□ -0.72
SYNGAP1-205ENST00000470232 WDR5P61964 334 aaKnown RBP10.57□□□□□ -0.72
SYNGAP1-205ENST00000470232 SBK1Q52WX2 424 aa10.57□□□□□ -0.72
SYNGAP1-205ENST00000470232 PPP4R3BQ5MIZ7 849 aa10.57□□□□□ -0.72
SYNGAP1-205ENST00000470232 SLFN13Q68D06 897 aa10.57□□□□□ -0.72
SYNGAP1-205ENST00000470232 CNKSR3Q6P9H4 555 aa10.57□□□□□ -0.72
SYNGAP1-205ENST00000470232 OR6J1Q8NGC5 347 aa10.57□□□□□ -0.72
SYNGAP1-205ENST00000470232 STAG1Q8WVM7 1258 aa10.57□□□□□ -0.72
SYNGAP1-205ENST00000470232 C1orf115Q9H7X2 142 aa10.57□□□□□ -0.72
SYNGAP1-205ENST00000470232 CYP39A1Q9NYL5 469 aa10.57□□□□□ -0.72
SYNGAP1-205ENST00000470232 MTUS1Q9ULD2 1270 aa10.57□□□□□ -0.72
SYNGAP1-205ENST00000470232 EXOC6BQ9Y2D4 811 aa10.57□□□□□ -0.72
SYNGAP1-205ENST00000470232 LCHNA4D1U4 455 aa10.56□□□□□ -0.72
SYNGAP1-205ENST00000470232 MINDY4BA8MYZ0 360 aa10.56□□□□□ -0.72
SYNGAP1-205ENST00000470232 NCK2O43639 380 aa10.56□□□□□ -0.72
SYNGAP1-205ENST00000470232 GJB5O95377 273 aa10.56□□□□□ -0.72
SYNGAP1-205ENST00000470232 RASA1P20936 1047 aa10.56□□□□□ -0.72
SYNGAP1-205ENST00000470232 PTPN5P54829 565 aa10.56□□□□□ -0.72
SYNGAP1-205ENST00000470232 IKBKEQ14164 716 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms