RNA–Protein interactions for RNA: ENST00000469769.1

THBS3-206, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-206ENST00000469769 ERVK-9P63128 1117 aa11.89□□□□□ -0.51
THBS3-206ENST00000469769 ERVK-24P63145 666 aa11.89□□□□□ -0.51
THBS3-206ENST00000469769 HTRA3P83110 453 aa11.89□□□□□ -0.51
THBS3-206ENST00000469769 NOM1Q5C9Z4 860 aaKnown RBP11.89□□□□□ -0.51
THBS3-206ENST00000469769 RILPL1Q5EBL4 403 aa11.89□□□□□ -0.51
THBS3-206ENST00000469769 MUM1L1Q5H9M0 696 aa11.89□□□□□ -0.51
THBS3-206ENST00000469769 MCTP1Q6DN14 999 aa11.89□□□□□ -0.51
THBS3-206ENST00000469769 C17orf99Q6UX52 265 aa11.89□□□□□ -0.51
THBS3-206ENST00000469769 TBC1D5Q92609 795 aa11.89□□□□□ -0.51
THBS3-206ENST00000469769 MOV10L1Q9BXT6 1211 aaKnown RBP11.89□□□□□ -0.51
THBS3-206ENST00000469769 RNF146Q9NTX7 359 aa11.89□□□□□ -0.51
THBS3-206ENST00000469769 FBXO40Q9UH90 709 aa11.89□□□□□ -0.51
THBS3-206ENST00000469769 CTDP1Q9Y5B0 961 aaPredicted RBP11.89□□□□□ -0.51
THBS3-206ENST00000469769 ZNFX1Q9P2E3 1918 aaKnown RBP11.88□□□□□ -0.51
THBS3-206ENST00000469769 GCOM1H8Y6P7 765 aaPredicted RBP11.88□□□□□ -0.51
THBS3-206ENST00000469769 CA12O43570 354 aa11.88□□□□□ -0.51
THBS3-206ENST00000469769 TLR2O60603 784 aa11.88□□□□□ -0.51
THBS3-206ENST00000469769 BAG4O95429 457 aaKnown RBP11.88□□□□□ -0.51
THBS3-206ENST00000469769 ALDH1A1P00352 501 aa11.88□□□□□ -0.51
THBS3-206ENST00000469769 POLR2MP0CAP2 368 aa11.88□□□□□ -0.51
THBS3-206ENST00000469769 ALAS1P13196 640 aa11.88□□□□□ -0.51
THBS3-206ENST00000469769 FAM173BQ6P4H8 233 aa11.88□□□□□ -0.51
THBS3-206ENST00000469769 USP17L6PQ6QN14 398 aa11.88□□□□□ -0.51
THBS3-206ENST00000469769 GPRC5AQ8NFJ5 357 aa11.88□□□□□ -0.51
THBS3-206ENST00000469769 RASGRP4Q8TDF6 673 aa11.88□□□□□ -0.51
THBS3-206ENST00000469769 SMCR8Q8TEV9 937 aaPredicted RBP11.88□□□□□ -0.51
THBS3-206ENST00000469769 MROH8Q9H579 483 aa11.88□□□□□ -0.51
THBS3-206ENST00000469769 ACAD9Q9H845 621 aa11.88□□□□□ -0.51
THBS3-206ENST00000469769 POLR3EQ9NVU0 708 aa11.88□□□□□ -0.51
THBS3-206ENST00000469769 RTEL1Q9NZ71 1219 aa11.88□□□□□ -0.51
THBS3-206ENST00000469769 LCTP09848 1927 aa11.88□□□□□ -0.51
THBS3-206ENST00000469769 RPTORQ8N122 1335 aa11.87□□□□□ -0.51
THBS3-206ENST00000469769 DNAJC25-GNG10A0A024R161 153 aa11.87□□□□□ -0.51
THBS3-206ENST00000469769 CYP3A7-CYP3A51PA0A087WV96 503 aa11.87□□□□□ -0.51
THBS3-206ENST00000469769 FAM205CA6NFA0 338 aa11.87□□□□□ -0.51
THBS3-206ENST00000469769 PEX10O60683 326 aa11.87□□□□□ -0.51
THBS3-206ENST00000469769 CYP3A4P08684 503 aa11.87□□□□□ -0.51
THBS3-206ENST00000469769 CYP3A7P24462 503 aa11.87□□□□□ -0.51
THBS3-206ENST00000469769 SREBF1P36956 1147 aa11.87□□□□□ -0.51
THBS3-206ENST00000469769 NASPP49321 788 aaPredicted RBP11.87□□□□□ -0.51
THBS3-206ENST00000469769 USP11P51784 963 aa11.87□□□□□ -0.51
THBS3-206ENST00000469769 RPS6P62753 249 aaKnown RBP11.87□□□□□ -0.51
THBS3-206ENST00000469769 DNM1Q05193 864 aaKnown RBP11.87□□□□□ -0.51
THBS3-206ENST00000469769 ORC2Q13416 577 aaPredicted RBP11.87□□□□□ -0.51
THBS3-206ENST00000469769 UBE2SQ16763 222 aa11.87□□□□□ -0.51
THBS3-206ENST00000469769 FOXD4L5Q5VV16 416 aaPredicted RBP11.87□□□□□ -0.51
THBS3-206ENST00000469769 SAMD1Q6SPF0 538 aaPredicted RBP11.87□□□□□ -0.51
THBS3-206ENST00000469769 PIK3AP1Q6ZUJ8 805 aa11.87□□□□□ -0.51
THBS3-206ENST00000469769 ABRAQ8N0Z2 381 aa11.87□□□□□ -0.51
THBS3-206ENST00000469769 TMEM87AQ8NBN3 555 aa11.87□□□□□ -0.51
THBS3-206ENST00000469769 SYTL5Q8TDW5 730 aaPredicted RBP11.87□□□□□ -0.51
THBS3-206ENST00000469769 FOXD4L4Q8WXT5 416 aaPredicted RBP11.87□□□□□ -0.51
THBS3-206ENST00000469769 MBOAT7Q96N66 472 aa11.87□□□□□ -0.51
THBS3-206ENST00000469769 ZNF396Q96N95 335 aaPredicted RBP11.87□□□□□ -0.51
THBS3-206ENST00000469769 USP28Q96RU2 1077 aa11.87□□□□□ -0.51
THBS3-206ENST00000469769 A1CFQ9NQ94 594 aaKnown RBP11.87□□□□□ -0.51
THBS3-206ENST00000469769 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.87□□□□□ -0.51
THBS3-206ENST00000469769 TMEM260Q9NX78 707 aa11.87□□□□□ -0.51
THBS3-206ENST00000469769 CYP39A1Q9NYL5 469 aa11.87□□□□□ -0.51
THBS3-206ENST00000469769 COL20A1Q9P218 1284 aa11.87□□□□□ -0.51
THBS3-206ENST00000469769 BIN2Q9UBW5 565 aaPredicted RBP11.87□□□□□ -0.51
THBS3-206ENST00000469769 RCOR1Q9UKL0 485 aa11.87□□□□□ -0.51
THBS3-206ENST00000469769 DOCK3Q8IZD9 2030 aa11.87□□□□□ -0.51
THBS3-206ENST00000469769 CCDC194A0A1B0GVG4 234 aa11.86□□□□□ -0.51
THBS3-206ENST00000469769 AOC2O75106 756 aa11.86□□□□□ -0.51
THBS3-206ENST00000469769 CFBP00751 764 aa11.86□□□□□ -0.51
THBS3-206ENST00000469769 ERCC3P19447 782 aa11.86□□□□□ -0.51
THBS3-206ENST00000469769 CIITAP33076 1130 aa11.86□□□□□ -0.51
THBS3-206ENST00000469769 VEGFBP49765 207 aa11.86□□□□□ -0.51
THBS3-206ENST00000469769 KRT85P78386 507 aa11.86□□□□□ -0.51
THBS3-206ENST00000469769 CCNA1P78396 465 aa11.86□□□□□ -0.51
THBS3-206ENST00000469769 NONOQ15233 471 aaKnown RBP eCLIP11.86□□□□□ -0.51
THBS3-206ENST00000469769 PTPAQ15257 358 aa11.86□□□□□ -0.51
THBS3-206ENST00000469769 TAF1CQ15572 869 aaPredicted RBP11.86□□□□□ -0.51
THBS3-206ENST00000469769 JAKMIP3Q5VZ66 844 aa11.86□□□□□ -0.51
THBS3-206ENST00000469769 PPP4R3AQ6IN85 833 aa11.86□□□□□ -0.51
THBS3-206ENST00000469769 MOXD1Q6UVY6 613 aa11.86□□□□□ -0.51
THBS3-206ENST00000469769 TBCKQ8TEA7 893 aa11.86□□□□□ -0.51
THBS3-206ENST00000469769 PAGR1Q9BTK6 254 aa11.86□□□□□ -0.51
THBS3-206ENST00000469769 ANO3Q9BYT9 981 aa11.86□□□□□ -0.51
THBS3-206ENST00000469769 PORCNQ9H237 461 aa11.86□□□□□ -0.51
THBS3-206ENST00000469769 R3HDMLQ9H3Y0 253 aa11.86□□□□□ -0.51
THBS3-206ENST00000469769 ZFYVE28Q9HCC9 887 aa11.86□□□□□ -0.51
THBS3-206ENST00000469769 CFAP45Q9UL16 551 aa11.86□□□□□ -0.51
THBS3-206ENST00000469769 PFASO15067 1338 aa11.86□□□□□ -0.51
THBS3-206ENST00000469769 ELP1O95163 1332 aa11.86□□□□□ -0.51
THBS3-206ENST00000469769 LOC102724159A0A0B4J2E5 919 aa11.85□□□□□ -0.51
THBS3-206ENST00000469769 SPDYE3A6NKU9 549 aa11.85□□□□□ -0.51
THBS3-206ENST00000469769 WNT7AO00755 349 aa11.85□□□□□ -0.51
THBS3-206ENST00000469769 STRNO43815 780 aa11.85□□□□□ -0.51
THBS3-206ENST00000469769 YEATS4O95619 227 aa11.85□□□□□ -0.51
THBS3-206ENST00000469769 HOXA13P31271 388 aaPredicted RBP11.85□□□□□ -0.51
THBS3-206ENST00000469769 CRHR2Q13324 411 aa11.85□□□□□ -0.51
THBS3-206ENST00000469769 GNL2Q13823 731 aaKnown RBP11.85□□□□□ -0.51
THBS3-206ENST00000469769 BAATQ14032 418 aaPredicted RBP11.85□□□□□ -0.51
THBS3-206ENST00000469769 PLS1Q14651 629 aa11.85□□□□□ -0.51
THBS3-206ENST00000469769 PWP2Q15269 919 aaKnown RBP11.85□□□□□ -0.51
THBS3-206ENST00000469769 ANO1Q5XXA6 986 aa11.85□□□□□ -0.51
THBS3-206ENST00000469769 RNF207Q6ZRF8 634 aa11.85□□□□□ -0.51
THBS3-206ENST00000469769 NEK8Q86SG6 692 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms