RNA–Protein interactions for RNA: ENST00000469479.1

VPS8-219, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-219ENST00000469479 PLCG1P19174 1290 aa7.18□□□□□ -1.26
VPS8-219ENST00000469479 EIF4BP23588 611 aaKnown RBP7.18□□□□□ -1.26
VPS8-219ENST00000469479 VIPR1P32241 457 aa7.18□□□□□ -1.26
VPS8-219ENST00000469479 TNNI2P48788 182 aa7.18□□□□□ -1.26
VPS8-219ENST00000469479 LIG3P49916 1009 aa7.18□□□□□ -1.26
VPS8-219ENST00000469479 EPHB3P54753 998 aa7.18□□□□□ -1.26
VPS8-219ENST00000469479 YBX1P67809 324 aaKnown RBP7.18□□□□□ -1.26
VPS8-219ENST00000469479 R3HDM1Q15032 1099 aaKnown RBP7.18□□□□□ -1.26
VPS8-219ENST00000469479 TMEM201Q5SNT2 666 aa7.18□□□□□ -1.26
VPS8-219ENST00000469479 CNKSR3Q6P9H4 555 aa7.18□□□□□ -1.26
VPS8-219ENST00000469479 SLFN12Q8IYM2 578 aa7.18□□□□□ -1.26
VPS8-219ENST00000469479 ASB16Q96NS5 453 aa7.18□□□□□ -1.26
VPS8-219ENST00000469479 ORAI2Q96SN7 254 aa7.18□□□□□ -1.26
VPS8-219ENST00000469479 ASCC2Q9H1I8 757 aaPredicted RBP7.18□□□□□ -1.26
VPS8-219ENST00000469479 EPB41L4AQ9HCS5 686 aaPredicted RBP7.18□□□□□ -1.26
VPS8-219ENST00000469479 METP08581 1390 aa7.18□□□□□ -1.26
VPS8-219ENST00000469479 MARF1Q9Y4F3 1742 aaKnown RBP7.18□□□□□ -1.26
VPS8-219ENST00000469479 VPS8Q8N3P4 1428 aa7.18□□□□□ -1.26
VPS8-219ENST00000469479 MYO5BQ9ULV0 1848 aa7.17□□□□□ -1.26
VPS8-219ENST00000469479 PXDNQ92626 1479 aa7.17□□□□□ -1.26
VPS8-219ENST00000469479 ADGRB2O60241 1585 aa7.17□□□□□ -1.26
VPS8-219ENST00000469479 UPK3BL1B0FP48 263 aa7.17□□□□□ -1.26
VPS8-219ENST00000469479 UPK3BL2E5RIL1 263 aa7.17□□□□□ -1.26
VPS8-219ENST00000469479 RLBP1P12271 317 aa7.17□□□□□ -1.26
VPS8-219ENST00000469479 PNLIPP16233 465 aa7.17□□□□□ -1.26
VPS8-219ENST00000469479 RPL10P27635 214 aaKnown RBP7.17□□□□□ -1.26
VPS8-219ENST00000469479 FRMD5Q7Z6J6 570 aa7.17□□□□□ -1.26
VPS8-219ENST00000469479 KREMEN1Q96MU8 473 aa7.17□□□□□ -1.26
VPS8-219ENST00000469479 ZMYM5Q9UJ78 669 aa7.17□□□□□ -1.26
VPS8-219ENST00000469479 CCDC144AA2RUR9 1427 aa7.17□□□□□ -1.26
VPS8-219ENST00000469479 EFEMP1Q12805 493 aa7.16□□□□□ -1.26
VPS8-219ENST00000469479 LINC01356Q8N9X3 169 aa7.16□□□□□ -1.26
VPS8-219ENST00000469479 MZB1Q8WU39 189 aa7.16□□□□□ -1.26
VPS8-219ENST00000469479 MAP6Q96JE9 813 aa7.16□□□□□ -1.26
VPS8-219ENST00000469479 PPP1R1BQ9UD71 204 aaPredicted RBP7.16□□□□□ -1.26
VPS8-219ENST00000469479 CDC42BPGQ6DT37 1551 aa7.16□□□□□ -1.26
VPS8-219ENST00000469479 NRXN3Q9Y4C0 1643 aa7.16□□□□□ -1.26
VPS8-219ENST00000469479 RGPD1P0DJD0 1748 aa7.15□□□□□ -1.26
VPS8-219ENST00000469479 SHISA3A0PJX4 238 aa7.15□□□□□ -1.26
VPS8-219ENST00000469479 INSRRP14616 1297 aa7.15□□□□□ -1.26
VPS8-219ENST00000469479 TFE3P19532 575 aaPredicted RBP7.15□□□□□ -1.26
VPS8-219ENST00000469479 VMACQ2NL98 169 aa7.15□□□□□ -1.26
VPS8-219ENST00000469479 CEP128Q6ZU80 1094 aa7.15□□□□□ -1.26
VPS8-219ENST00000469479 CCDC84Q86UT8 332 aaPredicted RBP7.15□□□□□ -1.26
VPS8-219ENST00000469479 FAM129CQ86XR2 697 aa7.15□□□□□ -1.26
VPS8-219ENST00000469479 SYTL5Q8TDW5 730 aaPredicted RBP7.15□□□□□ -1.26
VPS8-219ENST00000469479 JARID2Q92833 1246 aaPredicted RBP7.15□□□□□ -1.26
VPS8-219ENST00000469479 CCDC74BQ96LY2 380 aa7.15□□□□□ -1.26
VPS8-219ENST00000469479 SPON1Q9HCB6 807 aa7.15□□□□□ -1.26
VPS8-219ENST00000469479 CCDC9Q9Y3X0 531 aaKnown RBP7.15□□□□□ -1.26
VPS8-219ENST00000469479 CILPO75339 1184 aa7.14□□□□□ -1.27
VPS8-219ENST00000469479 USP2O75604 605 aaPredicted RBP7.14□□□□□ -1.27
VPS8-219ENST00000469479 GNA15P30679 374 aa7.14□□□□□ -1.27
VPS8-219ENST00000469479 ERVFRD-1P60508 538 aa7.14□□□□□ -1.27
VPS8-219ENST00000469479 PLP2Q04941 152 aa7.14□□□□□ -1.27
VPS8-219ENST00000469479 TMEM62Q0P6H9 643 aa7.14□□□□□ -1.27
VPS8-219ENST00000469479 PUM1Q14671 1186 aaKnown RBP eCLIP7.14□□□□□ -1.27
VPS8-219ENST00000469479 MAP3K11Q16584 847 aa7.14□□□□□ -1.27
VPS8-219ENST00000469479 NBPF8Q3BBV2 869 aa7.14□□□□□ -1.27
VPS8-219ENST00000469479 ZNF326Q5BKZ1 582 aaKnown RBP7.14□□□□□ -1.27
VPS8-219ENST00000469479 SPATA31A3Q5VYP0 1347 aa7.14□□□□□ -1.27
VPS8-219ENST00000469479 WAPLQ7Z5K2 1190 aa7.14□□□□□ -1.27
VPS8-219ENST00000469479 TMEFF1Q8IYR6 380 aa7.14□□□□□ -1.27
VPS8-219ENST00000469479 RETREG2Q8NC44 543 aa7.14□□□□□ -1.27
VPS8-219ENST00000469479 USP32Q8NFA0 1604 aa7.14□□□□□ -1.27
VPS8-219ENST00000469479 NWD2Q9ULI1 1742 aa7.14□□□□□ -1.27
VPS8-219ENST00000469479 CORINQ9Y5Q5 1042 aa7.14□□□□□ -1.27
VPS8-219ENST00000469479 ARHGEF10O15013 1369 aa7.13□□□□□ -1.27
VPS8-219ENST00000469479 EFEMP2O95967 443 aa7.13□□□□□ -1.27
VPS8-219ENST00000469479 MPOP05164 745 aa7.13□□□□□ -1.27
VPS8-219ENST00000469479 LDHBP07195 334 aaKnown RBP7.13□□□□□ -1.27
VPS8-219ENST00000469479 CDR1P51861 262 aa7.13□□□□□ -1.27
VPS8-219ENST00000469479 NMIQ13287 307 aaPredicted RBP7.13□□□□□ -1.27
VPS8-219ENST00000469479 USHBP1Q8N6Y0 703 aa7.13□□□□□ -1.27
VPS8-219ENST00000469479 SYT8Q8NBV8 401 aa7.13□□□□□ -1.27
VPS8-219ENST00000469479 BRWD3Q6RI45 1802 aa7.13□□□□□ -1.27
VPS8-219ENST00000469479 ROBO2Q9HCK4 1378 aa7.12□□□□□ -1.27
VPS8-219ENST00000469479 SSU72P8A0A1W2PR75 194 aa7.12□□□□□ -1.27
VPS8-219ENST00000469479 BPNT1O95861 308 aa7.12□□□□□ -1.27
VPS8-219ENST00000469479 PCBP3P57721 371 aaKnown RBP7.12□□□□□ -1.27
VPS8-219ENST00000469479 CHMP4BP1P59074 171 aa7.12□□□□□ -1.27
VPS8-219ENST00000469479 C1QTNF8P60827 252 aa7.12□□□□□ -1.27
VPS8-219ENST00000469479 DAGLBQ8NCG7 672 aa7.12□□□□□ -1.27
VPS8-219ENST00000469479 PWWP2AQ96N64 755 aa7.12□□□□□ -1.27
VPS8-219ENST00000469479 ADAM7Q9H2U9 754 aa7.12□□□□□ -1.27
VPS8-219ENST00000469479 CNOT11Q9UKZ1 510 aaKnown RBP7.12□□□□□ -1.27
VPS8-219ENST00000469479 AK5Q9Y6K8 562 aa7.12□□□□□ -1.27
VPS8-219ENST00000469479 CEP350Q5VT06 3117 aa7.12□□□□□ -1.27
VPS8-219ENST00000469479 E9PCH4 1651 aa7.12□□□□□ -1.27
VPS8-219ENST00000469479 NEXMIFQ5QGS0 1516 aa7.11□□□□□ -1.27
VPS8-219ENST00000469479 TNS3Q68CZ2 1445 aa7.11□□□□□ -1.27
VPS8-219ENST00000469479 KCNQ2O43526 872 aa7.11□□□□□ -1.27
VPS8-219ENST00000469479 ARL4AP40617 200 aa7.11□□□□□ -1.27
VPS8-219ENST00000469479 FAM196AQ6ZSG2 479 aa7.11□□□□□ -1.27
VPS8-219ENST00000469479 ZNF655Q8N720 491 aaPredicted RBP7.11□□□□□ -1.27
VPS8-219ENST00000469479 HHIPL1Q96JK4 782 aa7.11□□□□□ -1.27
VPS8-219ENST00000469479 CAMKK2Q96RR4 588 aa7.11□□□□□ -1.27
VPS8-219ENST00000469479 MYRFQ9Y2G1 1151 aa7.11□□□□□ -1.27
VPS8-219ENST00000469479 KIF1AQ12756 1690 aa7.11□□□□□ -1.27
VPS8-219ENST00000469479 RPGRIP1LQ68CZ1 1315 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms