RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 C10orf67Q8IYJ2 551 aa16.61■□□□□ 0.25
LIMS2-213ENST00000469300 GPR161Q8N6U8 529 aaKnown RBP16.61■□□□□ 0.25
LIMS2-213ENST00000469300 NDC80O14777 642 aa16.61■□□□□ 0.25
LIMS2-213ENST00000469300 ERCC5P28715 1186 aaPredicted RBP16.61■□□□□ 0.25
LIMS2-213ENST00000469300 GABPB1Q06547 395 aaPredicted RBP16.61■□□□□ 0.25
LIMS2-213ENST00000469300 MIS18BP1Q6P0N0 1132 aa16.61■□□□□ 0.25
LIMS2-213ENST00000469300 RETREG2Q8NC44 543 aa16.61■□□□□ 0.25
LIMS2-213ENST00000469300 MAIP1Q8WWC4 291 aa16.61■□□□□ 0.25
LIMS2-213ENST00000469300 RNF34Q969K3 372 aa16.61■□□□□ 0.25
LIMS2-213ENST00000469300 CAPZA3Q96KX2 299 aa16.61■□□□□ 0.25
LIMS2-213ENST00000469300 SUGCTQ9HAC7 445 aa16.61■□□□□ 0.25
LIMS2-213ENST00000469300 KIAA1024Q9UPX6 916 aa16.61■□□□□ 0.25
LIMS2-213ENST00000469300 UTYO14607 1347 aa16.6■□□□□ 0.25
LIMS2-213ENST00000469300 PALM3A6NDB9 673 aaPredicted RBP16.6■□□□□ 0.25
LIMS2-213ENST00000469300 ACTN4O43707 911 aaKnown RBP16.6■□□□□ 0.25
LIMS2-213ENST00000469300 CNGA1P29973 690 aa16.6■□□□□ 0.25
LIMS2-213ENST00000469300 ARL6IP4Q66PJ3 421 aaKnown RBP16.6■□□□□ 0.25
LIMS2-213ENST00000469300 ARMCX5Q6P1M9 558 aa16.6■□□□□ 0.25
LIMS2-213ENST00000469300 SH3RF3Q8TEJ3 882 aaPredicted RBP16.6■□□□□ 0.25
LIMS2-213ENST00000469300 CLIC4Q9Y696 253 aa16.6■□□□□ 0.25
LIMS2-213ENST00000469300 CNTNAP4Q9C0A0 1308 aa16.6■□□□□ 0.25
LIMS2-213ENST00000469300 CYP2J2P51589 502 aa16.6■□□□□ 0.25
LIMS2-213ENST00000469300 CDC37Q16543 378 aaPredicted RBP16.6■□□□□ 0.25
LIMS2-213ENST00000469300 TRMT44Q8IYL2 757 aaKnown RBP16.6■□□□□ 0.25
LIMS2-213ENST00000469300 HAUS2Q9NVX0 235 aa16.6■□□□□ 0.25
LIMS2-213ENST00000469300 USP32Q8NFA0 1604 aa16.6■□□□□ 0.25
LIMS2-213ENST00000469300 ODR4Q5SWX8 454 aa16.6■□□□□ 0.25
LIMS2-213ENST00000469300 NSRP1Q9H0G5 558 aaKnown RBP16.6■□□□□ 0.25
LIMS2-213ENST00000469300 RIPOR2Q9Y4F9 1068 aa16.6■□□□□ 0.25
LIMS2-213ENST00000469300 MYO3AQ8NEV4 1616 aa16.6■□□□□ 0.25
LIMS2-213ENST00000469300 STK10O94804 968 aaKnown RBP16.59■□□□□ 0.25
LIMS2-213ENST00000469300 GABPB2Q8TAK5 448 aaPredicted RBP16.59■□□□□ 0.25
LIMS2-213ENST00000469300 SLC16A10Q8TF71 515 aa16.59■□□□□ 0.25
LIMS2-213ENST00000469300 RIC8AQ9NPQ8 531 aa16.59■□□□□ 0.25
LIMS2-213ENST00000469300 C1orf112Q9NSG2 853 aa16.59■□□□□ 0.25
LIMS2-213ENST00000469300 GH2P01242 217 aa16.59■□□□□ 0.25
LIMS2-213ENST00000469300 SLC16A2P36021 539 aa16.59■□□□□ 0.25
LIMS2-213ENST00000469300 DHTKD1Q96HY7 919 aaPredicted RBP16.59■□□□□ 0.25
LIMS2-213ENST00000469300 NBPF3Q9H094 633 aa16.59■□□□□ 0.25
LIMS2-213ENST00000469300 UTP14CQ5TAP6 766 aaKnown RBP16.59■□□□□ 0.25
LIMS2-213ENST00000469300 DCP1AQ9NPI6 582 aaPredicted RBP16.59■□□□□ 0.25
LIMS2-213ENST00000469300 CYP2D7A0A087X1C5 515 aa16.59■□□□□ 0.25
LIMS2-213ENST00000469300 ZBTB7AO95365 584 aa16.59■□□□□ 0.25
LIMS2-213ENST00000469300 CAPN2P17655 700 aa16.59■□□□□ 0.25
LIMS2-213ENST00000469300 CYP4A11Q02928 519 aa16.59■□□□□ 0.25
LIMS2-213ENST00000469300 TMTC3Q6ZXV5 915 aa16.59■□□□□ 0.25
LIMS2-213ENST00000469300 MICALL1Q8N3F8 863 aa16.59■□□□□ 0.25
LIMS2-213ENST00000469300 OTUD6BQ8N6M0 293 aa16.59■□□□□ 0.25
LIMS2-213ENST00000469300 FAM84BQ96KN1 310 aaPredicted RBP16.59■□□□□ 0.25
LIMS2-213ENST00000469300 SPON1Q9HCB6 807 aa16.59■□□□□ 0.25
LIMS2-213ENST00000469300 HOXC10Q9NYD6 342 aa16.59■□□□□ 0.25
LIMS2-213ENST00000469300 STK36Q9NRP7 1315 aa16.59■□□□□ 0.25
LIMS2-213ENST00000469300 LRRIQ4A6NIV6 560 aa16.58■□□□□ 0.25
LIMS2-213ENST00000469300 CAMTA2O94983 1202 aa16.58■□□□□ 0.25
LIMS2-213ENST00000469300 NDUFA8P51970 172 aa16.58■□□□□ 0.25
LIMS2-213ENST00000469300 C2orf69Q8N8R5 385 aa16.58■□□□□ 0.25
LIMS2-213ENST00000469300 ZFP91Q96JP5 570 aaPredicted RBP16.58■□□□□ 0.25
LIMS2-213ENST00000469300 FAM204AQ9H8W3 233 aa16.58■□□□□ 0.25
LIMS2-213ENST00000469300 HERC5Q9UII4 1024 aaKnown RBP16.58■□□□□ 0.25
LIMS2-213ENST00000469300 FAM169AQ9Y6X4 670 aa16.58■□□□□ 0.25
LIMS2-213ENST00000469300 PNPLA7Q6ZV29 1317 aa16.58■□□□□ 0.25
LIMS2-213ENST00000469300 ZEB2O60315 1214 aa16.58■□□□□ 0.24
LIMS2-213ENST00000469300 EN1Q05925 392 aaPredicted RBP16.58■□□□□ 0.24
LIMS2-213ENST00000469300 ADAM9Q13443 819 aa16.58■□□□□ 0.24
LIMS2-213ENST00000469300 RRAGAQ7L523 313 aa16.58■□□□□ 0.24
LIMS2-213ENST00000469300 CCDC114Q96M63 670 aa16.58■□□□□ 0.24
LIMS2-213ENST00000469300 CLIC6Q96NY7 704 aa16.58■□□□□ 0.24
LIMS2-213ENST00000469300 GPR101Q96P66 508 aaPredicted RBP16.58■□□□□ 0.24
LIMS2-213ENST00000469300 SLFN14P0C7P3 912 aa16.58■□□□□ 0.24
LIMS2-213ENST00000469300 PPP1R18Q6NYC8 613 aa16.58■□□□□ 0.24
LIMS2-213ENST00000469300 ZNF365Q70YC5 407 aa16.58■□□□□ 0.24
LIMS2-213ENST00000469300 MIGA2Q7L4E1 593 aa16.58■□□□□ 0.24
LIMS2-213ENST00000469300 GPT2Q8TD30 523 aa16.58■□□□□ 0.24
LIMS2-213ENST00000469300 FAM81BQ96LP2 452 aa16.58■□□□□ 0.24
LIMS2-213ENST00000469300 FAM207AQ9NSI2 230 aaPredicted RBP16.58■□□□□ 0.24
LIMS2-213ENST00000469300 RDH13Q8NBN7 331 aa16.58■□□□□ 0.24
LIMS2-213ENST00000469300 LINC00301Q8NCQ3 95 aa16.58■□□□□ 0.24
LIMS2-213ENST00000469300 FEZ2Q9UHY8 353 aaPredicted RBP16.58■□□□□ 0.24
LIMS2-213ENST00000469300 USP17L5A8MUK1 530 aa16.57■□□□□ 0.24
LIMS2-213ENST00000469300 GPSM2P81274 684 aa16.57■□□□□ 0.24
LIMS2-213ENST00000469300 TTC16Q8NEE8 873 aa16.57■□□□□ 0.24
LIMS2-213ENST00000469300 XPO4Q9C0E2 1151 aaKnown RBP16.57■□□□□ 0.24
LIMS2-213ENST00000469300 TDRD3Q9H7E2 651 aaKnown RBP16.57■□□□□ 0.24
LIMS2-213ENST00000469300 DAPK3O43293 454 aa16.57■□□□□ 0.24
LIMS2-213ENST00000469300 TMEM191BP0C7N4 346 aa16.57■□□□□ 0.24
LIMS2-213ENST00000469300 CCDC125Q86Z20 511 aa16.57■□□□□ 0.24
LIMS2-213ENST00000469300 COA7Q96BR5 231 aa16.57■□□□□ 0.24
LIMS2-213ENST00000469300 PREX1Q8TCU6 1659 aa16.57■□□□□ 0.24
LIMS2-213ENST00000469300 CLGNO14967 610 aa16.57■□□□□ 0.24
LIMS2-213ENST00000469300 CSF1RP07333 972 aa16.57■□□□□ 0.24
LIMS2-213ENST00000469300 BPIFB4P59827 614 aa16.57■□□□□ 0.24
LIMS2-213ENST00000469300 ORC2Q13416 577 aaPredicted RBP16.57■□□□□ 0.24
LIMS2-213ENST00000469300 LSM14BQ9BX40 385 aaKnown RBP16.57■□□□□ 0.24
LIMS2-213ENST00000469300 FEM1BQ9UK73 627 aa16.57■□□□□ 0.24
LIMS2-213ENST00000469300 PCDHA5Q9Y5H7 936 aa16.57■□□□□ 0.24
LIMS2-213ENST00000469300 STIM2Q9P246 746 aa16.56■□□□□ 0.24
LIMS2-213ENST00000469300 PXDNLA1KZ92 1463 aa16.56■□□□□ 0.24
LIMS2-213ENST00000469300 CPS1P31327 1500 aa16.56■□□□□ 0.24
LIMS2-213ENST00000469300 IQCA1LA6NCM1 817 aa16.56■□□□□ 0.24
LIMS2-213ENST00000469300 VGLL3A8MV65 326 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms