RNA–Protein interactions for RNA: ENST00000469154.5

SMARCD3-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-205ENST00000469154 ABL1P00519 1130 aa15.89■□□□□ 0.13
SMARCD3-205ENST00000469154 DNM2P50570 870 aa15.89■□□□□ 0.13
SMARCD3-205ENST00000469154 ZNF662Q6ZS27 426 aa15.89■□□□□ 0.13
SMARCD3-205ENST00000469154 NEK11Q8NG66 645 aa15.89■□□□□ 0.13
SMARCD3-205ENST00000469154 DHTKD1Q96HY7 919 aaPredicted RBP15.89■□□□□ 0.13
SMARCD3-205ENST00000469154 CHP1Q99653 195 aa15.89■□□□□ 0.13
SMARCD3-205ENST00000469154 ABCB6Q9NP58 842 aa15.89■□□□□ 0.13
SMARCD3-205ENST00000469154 KBTBD4Q9NVX7 518 aa15.89■□□□□ 0.13
SMARCD3-205ENST00000469154 G3V3G9 751 aa15.89■□□□□ 0.13
SMARCD3-205ENST00000469154 RHOXF2BP0C7M4 288 aa15.89■□□□□ 0.13
SMARCD3-205ENST00000469154 IL1R1P14778 569 aa15.89■□□□□ 0.13
SMARCD3-205ENST00000469154 HNRNPH2P55795 449 aaKnown RBP15.89■□□□□ 0.13
SMARCD3-205ENST00000469154 DCAF8Q5TAQ9 597 aa15.89■□□□□ 0.13
SMARCD3-205ENST00000469154 C12orf60Q5U649 245 aa15.89■□□□□ 0.13
SMARCD3-205ENST00000469154 EHBP1Q8NDI1 1231 aa15.89■□□□□ 0.13
SMARCD3-205ENST00000469154 RASGRP4Q8TDF6 673 aa15.89■□□□□ 0.13
SMARCD3-205ENST00000469154 RHOXF2Q9BQY4 288 aa15.89■□□□□ 0.13
SMARCD3-205ENST00000469154 NUP58Q9BVL2 599 aa15.89■□□□□ 0.13
SMARCD3-205ENST00000469154 RTFDC1Q9BY42 306 aaPredicted RBP15.89■□□□□ 0.13
SMARCD3-205ENST00000469154 L1RE1Q9UN81 338 aa15.89■□□□□ 0.13
SMARCD3-205ENST00000469154 BCS1LQ9Y276 419 aa15.89■□□□□ 0.13
SMARCD3-205ENST00000469154 SNED1Q8TER0 1413 aa15.89■□□□□ 0.13
SMARCD3-205ENST00000469154 USP17L8P0C7I0 530 aa15.88■□□□□ 0.13
SMARCD3-205ENST00000469154 PPP1R2P41236 205 aa15.88■□□□□ 0.13
SMARCD3-205ENST00000469154 KRT83P78385 493 aa15.88■□□□□ 0.13
SMARCD3-205ENST00000469154 MUM1L1Q5H9M0 696 aa15.88■□□□□ 0.13
SMARCD3-205ENST00000469154 TRAPPC11Q7Z392 1133 aa15.88■□□□□ 0.13
SMARCD3-205ENST00000469154 AMOTL1Q8IY63 956 aa15.88■□□□□ 0.13
SMARCD3-205ENST00000469154 STAG2Q8N3U4 1231 aa15.88■□□□□ 0.13
SMARCD3-205ENST00000469154 COA1Q9GZY4 146 aa15.88■□□□□ 0.13
SMARCD3-205ENST00000469154 TMEM60Q9H2L4 133 aa15.88■□□□□ 0.13
SMARCD3-205ENST00000469154 IL17RBQ9NRM6 502 aa15.88■□□□□ 0.13
SMARCD3-205ENST00000469154 TCP11L1Q9NUJ3 509 aa15.88■□□□□ 0.13
SMARCD3-205ENST00000469154 MAD2L2Q9UI95 211 aa15.88■□□□□ 0.13
SMARCD3-205ENST00000469154 GUCA1BQ9UMX6 200 aa15.88■□□□□ 0.13
SMARCD3-205ENST00000469154 VSNL1P62760 191 aa15.88■□□□□ 0.13
SMARCD3-205ENST00000469154 TTI2Q6NXR4 508 aa15.88■□□□□ 0.13
SMARCD3-205ENST00000469154 WDR93Q6P2C0 686 aa15.88■□□□□ 0.13
SMARCD3-205ENST00000469154 FAM114A1Q8IWE2 563 aa15.88■□□□□ 0.13
SMARCD3-205ENST00000469154 RTKN2Q8IZC4 609 aa15.88■□□□□ 0.13
SMARCD3-205ENST00000469154 RETREG2Q8NC44 543 aa15.88■□□□□ 0.13
SMARCD3-205ENST00000469154 LZTS2Q9BRK4 669 aa15.88■□□□□ 0.13
SMARCD3-205ENST00000469154 ACBD3Q9H3P7 528 aa15.88■□□□□ 0.13
SMARCD3-205ENST00000469154 DBNDD1Q9H9R9 158 aa15.88■□□□□ 0.13
SMARCD3-205ENST00000469154 BARHL2Q9NY43 387 aa15.88■□□□□ 0.13
SMARCD3-205ENST00000469154 BICDL2A1A5D9 508 aa15.87■□□□□ 0.13
SMARCD3-205ENST00000469154 STXBP3O00186 592 aa15.87■□□□□ 0.13
SMARCD3-205ENST00000469154 PES1O00541 588 aaKnown RBP15.87■□□□□ 0.13
SMARCD3-205ENST00000469154 CYLC1P35663 651 aaPredicted RBP15.87■□□□□ 0.13
SMARCD3-205ENST00000469154 PMS1P54277 932 aaKnown RBP15.87■□□□□ 0.13
SMARCD3-205ENST00000469154 MCM6Q14566 821 aa15.87■□□□□ 0.13
SMARCD3-205ENST00000469154 AOC3Q16853 763 aa15.87■□□□□ 0.13
SMARCD3-205ENST00000469154 INF2Q27J81 1249 aa15.87■□□□□ 0.13
SMARCD3-205ENST00000469154 TYW1BQ6NUM6 668 aa15.87■□□□□ 0.13
SMARCD3-205ENST00000469154 AK8Q96MA6 479 aa15.87■□□□□ 0.13
SMARCD3-205ENST00000469154 FHDC1Q9C0D6 1143 aaPredicted RBP15.87■□□□□ 0.13
SMARCD3-205ENST00000469154 PDE11AQ9HCR9 933 aa15.87■□□□□ 0.13
SMARCD3-205ENST00000469154 EXOC1Q9NV70 894 aa15.87■□□□□ 0.13
SMARCD3-205ENST00000469154 PP2D1A8MPX8 630 aa15.87■□□□□ 0.13
SMARCD3-205ENST00000469154 MCM3P25205 808 aa15.87■□□□□ 0.13
SMARCD3-205ENST00000469154 HERVK_113P62684 666 aa15.87■□□□□ 0.13
SMARCD3-205ENST00000469154 MEA1Q16626 185 aa15.87■□□□□ 0.13
SMARCD3-205ENST00000469154 HEATR3Q7Z4Q2 680 aa15.87■□□□□ 0.13
SMARCD3-205ENST00000469154 WDR66Q8TBY9 1149 aa15.87■□□□□ 0.13
SMARCD3-205ENST00000469154 MKNK2Q9HBH9 465 aa15.87■□□□□ 0.13
SMARCD3-205ENST00000469154 MKRN1Q9UHC7 482 aaKnown RBP15.87■□□□□ 0.13
SMARCD3-205ENST00000469154 ADAM21Q9UKJ8 722 aa15.87■□□□□ 0.13
SMARCD3-205ENST00000469154 CDK5RAP2Q96SN8 1893 aa15.87■□□□□ 0.13
SMARCD3-205ENST00000469154 GTF2IP78347 998 aa15.86■□□□□ 0.13
SMARCD3-205ENST00000469154 ZNHIT6Q9NWK9 470 aaKnown RBP15.86■□□□□ 0.13
SMARCD3-205ENST00000469154 TFRCP02786 760 aaKnown RBP15.86■□□□□ 0.13
SMARCD3-205ENST00000469154 TSPY3P0CV98 308 aa15.86■□□□□ 0.13
SMARCD3-205ENST00000469154 TSPY8P0CW00 308 aa15.86■□□□□ 0.13
SMARCD3-205ENST00000469154 CCNE1P24864 410 aa15.86■□□□□ 0.13
SMARCD3-205ENST00000469154 CKAP4Q07065 602 aaKnown RBP15.86■□□□□ 0.13
SMARCD3-205ENST00000469154 GRIPAP1Q4V328 841 aa15.86■□□□□ 0.13
SMARCD3-205ENST00000469154 CCDC122Q5T0U0 273 aa15.86■□□□□ 0.13
SMARCD3-205ENST00000469154 SOGA3Q5TF21 947 aa15.86■□□□□ 0.13
SMARCD3-205ENST00000469154 NCAPH2Q6IBW4 605 aa15.86■□□□□ 0.13
SMARCD3-205ENST00000469154 WDR59Q6PJI9 974 aa15.86■□□□□ 0.13
SMARCD3-205ENST00000469154 KRT25Q7Z3Z0 450 aa15.86■□□□□ 0.13
SMARCD3-205ENST00000469154 KIAA1328Q86T90 577 aa15.86■□□□□ 0.13
SMARCD3-205ENST00000469154 CABP7Q86V35 215 aa15.86■□□□□ 0.13
SMARCD3-205ENST00000469154 CSGALNACT2Q8N6G5 542 aa15.86■□□□□ 0.13
SMARCD3-205ENST00000469154 NOA1Q8NC60 698 aaKnown RBP15.86■□□□□ 0.13
SMARCD3-205ENST00000469154 SUPT20HQ8NEM7 779 aa15.86■□□□□ 0.13
SMARCD3-205ENST00000469154 P2RX5Q93086 422 aa15.86■□□□□ 0.13
SMARCD3-205ENST00000469154 RPGRIP1Q96KN7 1286 aa15.86■□□□□ 0.13
SMARCD3-205ENST00000469154 FLT1P17948 1338 aa15.86■□□□□ 0.13
SMARCD3-205ENST00000469154 PPIP5K2O43314 1243 aa15.85■□□□□ 0.13
SMARCD3-205ENST00000469154 KRT86O43790 486 aa15.85■□□□□ 0.13
SMARCD3-205ENST00000469154 OR52Z1P0C646 297 aa15.85■□□□□ 0.13
SMARCD3-205ENST00000469154 GSTO1P78417 241 aa15.85■□□□□ 0.13
SMARCD3-205ENST00000469154 CASP8Q14790 479 aa15.85■□□□□ 0.13
SMARCD3-205ENST00000469154 CCDC170Q8IYT3 715 aa15.85■□□□□ 0.13
SMARCD3-205ENST00000469154 JAKMIP2Q96AA8 810 aa15.85■□□□□ 0.13
SMARCD3-205ENST00000469154 TUBGCP2Q9BSJ2 902 aa15.85■□□□□ 0.13
SMARCD3-205ENST00000469154 TTYH3Q9C0H2 523 aa15.85■□□□□ 0.13
SMARCD3-205ENST00000469154 ZNF277Q9NRM2 450 aaPredicted RBP15.85■□□□□ 0.13
SMARCD3-205ENST00000469154 TRIM10Q9UDY6 481 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms