RNA–Protein interactions for RNA: ENST00000469006.1

SNED1-209, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 963 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-209ENST00000469006 CCDC96Q2M329 555 aa17.19■□□□□ 0.34
SNED1-209ENST00000469006 PI4K2BQ8TCG2 481 aa17.19■□□□□ 0.34
SNED1-209ENST00000469006 MORC4Q8TE76 937 aa17.19■□□□□ 0.34
SNED1-209ENST00000469006 IL17RBQ9NRM6 502 aa17.19■□□□□ 0.34
SNED1-209ENST00000469006 TRMT13Q9NUP7 481 aaKnown RBP17.19■□□□□ 0.34
SNED1-209ENST00000469006 PCDHA11Q9Y5I1 949 aa17.19■□□□□ 0.34
SNED1-209ENST00000469006 TRANK1O15050 2925 aa17.18■□□□□ 0.34
SNED1-209ENST00000469006 ERC2O15083 957 aa17.18■□□□□ 0.34
SNED1-209ENST00000469006 FOXP2O15409 715 aa17.18■□□□□ 0.34
SNED1-209ENST00000469006 ICAM1P05362 532 aa17.18■□□□□ 0.34
SNED1-209ENST00000469006 CYP2C9P11712 490 aa17.18■□□□□ 0.34
SNED1-209ENST00000469006 ATP2A2P16615 1042 aaKnown RBP17.18■□□□□ 0.34
SNED1-209ENST00000469006 INCENPQ9NQS7 918 aa17.18■□□□□ 0.34
SNED1-209ENST00000469006 POLR3EQ9NVU0 708 aa17.18■□□□□ 0.34
SNED1-209ENST00000469006 RAPGEFL1Q9UHV5 662 aa17.18■□□□□ 0.34
SNED1-209ENST00000469006 TNKSO95271 1327 aa17.18■□□□□ 0.34
SNED1-209ENST00000469006 MYL3P08590 195 aa17.17■□□□□ 0.34
SNED1-209ENST00000469006 ALDH5A1P51649 535 aaPredicted RBP17.17■□□□□ 0.34
SNED1-209ENST00000469006 TTLL4Q14679 1199 aa17.17■□□□□ 0.34
SNED1-209ENST00000469006 DUSP28Q4G0W2 176 aa17.17■□□□□ 0.34
SNED1-209ENST00000469006 OTUD7AQ8TE49 926 aaPredicted RBP17.17■□□□□ 0.34
SNED1-209ENST00000469006 DCAF4Q8WV16 495 aa17.17■□□□□ 0.34
SNED1-209ENST00000469006 TSPYL2Q9H2G4 693 aaPredicted RBP17.17■□□□□ 0.34
SNED1-209ENST00000469006 RANBP17Q9H2T7 1088 aaKnown RBP17.17■□□□□ 0.34
SNED1-209ENST00000469006 ADD3Q9UEY8 706 aaKnown RBP17.17■□□□□ 0.34
SNED1-209ENST00000469006 REV3LO60673 3130 aa17.16■□□□□ 0.34
SNED1-209ENST00000469006 NFIBO00712 420 aa17.16■□□□□ 0.34
SNED1-209ENST00000469006 RANBP6O60518 1105 aaKnown RBP17.16■□□□□ 0.34
SNED1-209ENST00000469006 PFKMP08237 780 aa17.16■□□□□ 0.34
SNED1-209ENST00000469006 SUPT20HL2P0C7V6 817 aa17.16■□□□□ 0.34
SNED1-209ENST00000469006 SLC16A2P36021 539 aa17.16■□□□□ 0.34
SNED1-209ENST00000469006 PURAQ00577 322 aaKnown RBP17.16■□□□□ 0.34
SNED1-209ENST00000469006 AAMPQ13685 434 aa17.16■□□□□ 0.34
SNED1-209ENST00000469006 BAATQ14032 418 aaPredicted RBP17.16■□□□□ 0.34
SNED1-209ENST00000469006 TTBK2Q6IQ55 1244 aa17.16■□□□□ 0.34
SNED1-209ENST00000469006 DEFB128Q7Z7B8 93 aa17.16■□□□□ 0.34
SNED1-209ENST00000469006 OR6J1Q8NGC5 347 aa17.16■□□□□ 0.34
SNED1-209ENST00000469006 WDR11Q9BZH6 1224 aa17.16■□□□□ 0.34
SNED1-209ENST00000469006 CA3P07451 260 aa17.15■□□□□ 0.34
SNED1-209ENST00000469006 CPT1AP50416 773 aa17.15■□□□□ 0.34
SNED1-209ENST00000469006 SYDE2Q5VT97 1194 aa17.15■□□□□ 0.34
SNED1-209ENST00000469006 SLC30A10Q6XR72 485 aa17.15■□□□□ 0.34
SNED1-209ENST00000469006 NECAB3Q96P71 396 aaPredicted RBP17.15■□□□□ 0.34
SNED1-209ENST00000469006 MTG1Q9BT17 334 aaPredicted RBP17.15■□□□□ 0.34
SNED1-209ENST00000469006 SCN5AQ14524 2016 aa17.14■□□□□ 0.34
SNED1-209ENST00000469006 TANC1Q9C0D5 1861 aa17.14■□□□□ 0.33
SNED1-209ENST00000469006 RBM47A0AV96 593 aaKnown RBP17.14■□□□□ 0.33
SNED1-209ENST00000469006 PTPDC1A2A3K4 754 aa17.14■□□□□ 0.33
SNED1-209ENST00000469006 ORC4O43929 436 aa17.14■□□□□ 0.33
SNED1-209ENST00000469006 NOVP48745 357 aa17.14■□□□□ 0.33
SNED1-209ENST00000469006 TFF2Q03403 129 aa17.14■□□□□ 0.33
SNED1-209ENST00000469006 SKIV2LQ15477 1246 aaKnown RBP17.14■□□□□ 0.33
SNED1-209ENST00000469006 FAM47CQ5HY64 1035 aa17.14■□□□□ 0.33
SNED1-209ENST00000469006 TMEM67Q5HYA8 995 aa17.14■□□□□ 0.33
SNED1-209ENST00000469006 VPS53Q5VIR6 699 aa17.14■□□□□ 0.33
SNED1-209ENST00000469006 BTNL9Q6UXG8 535 aa17.14■□□□□ 0.33
SNED1-209ENST00000469006 CRBNQ96SW2 442 aa17.14■□□□□ 0.33
SNED1-209ENST00000469006 GPHNQ9NQX3 736 aaPredicted RBP17.14■□□□□ 0.33
SNED1-209ENST00000469006 ANAPC4Q9UJX5 808 aa17.14■□□□□ 0.33
SNED1-209ENST00000469006 FRMPD2Q68DX3 1309 aaPredicted RBP17.14■□□□□ 0.33
SNED1-209ENST00000469006 SCN10AQ9Y5Y9 1956 aa17.13■□□□□ 0.33
SNED1-209ENST00000469006 LOC102724159A0A0B4J2E5 919 aa17.13■□□□□ 0.33
SNED1-209ENST00000469006 CALML3P27482 149 aa17.13■□□□□ 0.33
SNED1-209ENST00000469006 PWP2Q15269 919 aaKnown RBP17.13■□□□□ 0.33
SNED1-209ENST00000469006 NBPF20Q3BBV1 942 aa17.13■□□□□ 0.33
SNED1-209ENST00000469006 PPP1R13LQ8WUF5 828 aa17.13■□□□□ 0.33
SNED1-209ENST00000469006 CERS4Q9HA82 394 aa17.13■□□□□ 0.33
SNED1-209ENST00000469006 GPCPD1Q9NPB8 672 aa17.13■□□□□ 0.33
SNED1-209ENST00000469006 XIRP2A4UGR9 3374 aa17.13■□□□□ 0.33
SNED1-209ENST00000469006 PRRC2BQ5JSZ5 2229 aaKnown RBP17.13■□□□□ 0.33
SNED1-209ENST00000469006 RFXAPO00287 272 aa17.12■□□□□ 0.33
SNED1-209ENST00000469006 GTPBP6O43824 516 aaPredicted RBP17.12■□□□□ 0.33
SNED1-209ENST00000469006 ACTN1P12814 892 aa17.12■□□□□ 0.33
SNED1-209ENST00000469006 BMP1P13497 986 aa17.12■□□□□ 0.33
SNED1-209ENST00000469006 MX1P20591 662 aa17.12■□□□□ 0.33
SNED1-209ENST00000469006 RFC2P35250 354 aa17.12■□□□□ 0.33
SNED1-209ENST00000469006 PPP2R5BQ15173 497 aa17.12■□□□□ 0.33
SNED1-209ENST00000469006 BRDTQ58F21 947 aaPredicted RBP17.12■□□□□ 0.33
SNED1-209ENST00000469006 CLEC4DQ8WXI8 215 aa17.12■□□□□ 0.33
SNED1-209ENST00000469006 SLC9A7Q96T83 725 aa17.12■□□□□ 0.33
SNED1-209ENST00000469006 TMEM47Q9BQJ4 181 aa17.12■□□□□ 0.33
SNED1-209ENST00000469006 TOMM22Q9NS69 142 aa17.12■□□□□ 0.33
SNED1-209ENST00000469006 PCDHB15Q9Y5E8 787 aa17.12■□□□□ 0.33
SNED1-209ENST00000469006 RAD50Q92878 1312 aa17.12■□□□□ 0.33
SNED1-209ENST00000469006 TCF20Q9UGU0 1960 aaKnown RBP17.11■□□□□ 0.33
SNED1-209ENST00000469006 EPOPA6NHQ4 379 aa17.11■□□□□ 0.33
SNED1-209ENST00000469006 TOP1P11387 765 aaKnown RBP17.11■□□□□ 0.33
SNED1-209ENST00000469006 KCNQ1P51787 676 aa17.11■□□□□ 0.33
SNED1-209ENST00000469006 PDE4DQ08499 809 aa17.11■□□□□ 0.33
SNED1-209ENST00000469006 AAK1Q2M2I8 961 aa17.11■□□□□ 0.33
SNED1-209ENST00000469006 RRP12Q5JTH9 1297 aaKnown RBP17.11■□□□□ 0.33
SNED1-209ENST00000469006 NFRKBQ6P4R8 1299 aa17.11■□□□□ 0.33
SNED1-209ENST00000469006 RNF207Q6ZRF8 634 aa17.11■□□□□ 0.33
SNED1-209ENST00000469006 MTCH2Q9Y6C9 303 aa17.11■□□□□ 0.33
SNED1-209ENST00000469006 PITPNM1O00562 1244 aa17.1■□□□□ 0.33
SNED1-209ENST00000469006 NKRFO15226 690 aaKnown RBP eCLIP17.1■□□□□ 0.33
SNED1-209ENST00000469006 ARHGEF15O94989 841 aa17.1■□□□□ 0.33
SNED1-209ENST00000469006 FGRP09769 529 aa17.1■□□□□ 0.33
SNED1-209ENST00000469006 POU3F3P20264 500 aaPredicted RBP17.1■□□□□ 0.33
SNED1-209ENST00000469006 RETREG2Q8NC44 543 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms