RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 KIF22Q14807 665 aa9.32□□□□□ -0.92
HDAC6-216ENST00000468949 TMEM132BQ14DG7 1078 aa9.32□□□□□ -0.92
HDAC6-216ENST00000468949 ARHGEF6Q15052 776 aa9.32□□□□□ -0.92
HDAC6-216ENST00000468949 FAM110CQ1W6H9 321 aa9.32□□□□□ -0.92
HDAC6-216ENST00000468949 GALNT17Q6IS24 598 aa9.32□□□□□ -0.92
HDAC6-216ENST00000468949 ZNF579Q8NAF0 562 aaKnown RBP9.32□□□□□ -0.92
HDAC6-216ENST00000468949 CD99L2Q8TCZ2 262 aa9.32□□□□□ -0.92
HDAC6-216ENST00000468949 AGBL1Q96MI9 1066 aa9.32□□□□□ -0.92
HDAC6-216ENST00000468949 AIFM3Q96NN9 605 aa9.32□□□□□ -0.92
HDAC6-216ENST00000468949 TRERF1Q96PN7 1200 aa9.32□□□□□ -0.92
HDAC6-216ENST00000468949 ACAD9Q9H845 621 aa9.32□□□□□ -0.92
HDAC6-216ENST00000468949 TRIM17Q9Y577 477 aa9.32□□□□□ -0.92
HDAC6-216ENST00000468949 SMCO2A6NFE2 343 aa9.31□□□□□ -0.92
HDAC6-216ENST00000468949 SPDYE3A6NKU9 549 aa9.31□□□□□ -0.92
HDAC6-216ENST00000468949 GCOM1H8Y6P7 765 aaPredicted RBP9.31□□□□□ -0.92
HDAC6-216ENST00000468949 ATP2A1O14983 1001 aa9.31□□□□□ -0.92
HDAC6-216ENST00000468949 STX6O43752 255 aa9.31□□□□□ -0.92
HDAC6-216ENST00000468949 CFBP00751 764 aa9.31□□□□□ -0.92
HDAC6-216ENST00000468949 POLR2MP0CAP2 368 aa9.31□□□□□ -0.92
HDAC6-216ENST00000468949 FDPSP14324 419 aaKnown RBP9.31□□□□□ -0.92
HDAC6-216ENST00000468949 NUCB2P80303 420 aa9.31□□□□□ -0.92
HDAC6-216ENST00000468949 LACTBP83111 547 aaPredicted RBP9.31□□□□□ -0.92
HDAC6-216ENST00000468949 KCTD2Q14681 263 aa9.31□□□□□ -0.92
HDAC6-216ENST00000468949 PKN1Q16512 942 aa9.31□□□□□ -0.92
HDAC6-216ENST00000468949 SLC35G1Q2M3R5 365 aa9.31□□□□□ -0.92
HDAC6-216ENST00000468949 KRT40Q6A162 431 aa9.31□□□□□ -0.92
HDAC6-216ENST00000468949 MCTP2Q6DN12 878 aa9.31□□□□□ -0.92
HDAC6-216ENST00000468949 NSMFQ6X4W1 530 aa9.31□□□□□ -0.92
HDAC6-216ENST00000468949 OTOP1Q7RTM1 612 aa9.31□□□□□ -0.92
HDAC6-216ENST00000468949 RIOX2Q8IUF8 465 aa9.31□□□□□ -0.92
HDAC6-216ENST00000468949 REXO1Q8N1G1 1221 aaKnown RBP9.31□□□□□ -0.92
HDAC6-216ENST00000468949 ANKRD35Q8N283 1001 aa9.31□□□□□ -0.92
HDAC6-216ENST00000468949 CHST13Q8NET6 341 aa9.31□□□□□ -0.92
HDAC6-216ENST00000468949 PSTPIP2Q9H939 334 aa9.31□□□□□ -0.92
HDAC6-216ENST00000468949 BTBD7Q9P203 1132 aa9.31□□□□□ -0.92
HDAC6-216ENST00000468949 CPA4Q9UI42 421 aa9.31□□□□□ -0.92
HDAC6-216ENST00000468949 ZNF214Q9UL59 606 aaPredicted RBP9.31□□□□□ -0.92
HDAC6-216ENST00000468949 KCNJ14Q9UNX9 436 aa9.31□□□□□ -0.92
HDAC6-216ENST00000468949 PFASO15067 1338 aa9.31□□□□□ -0.92
HDAC6-216ENST00000468949 CCDC194A0A1B0GVG4 234 aa9.3□□□□□ -0.92
HDAC6-216ENST00000468949 ESYT2A0FGR8 921 aa9.3□□□□□ -0.92
HDAC6-216ENST00000468949 PPP1R11O60927 126 aaPredicted RBP9.3□□□□□ -0.92
HDAC6-216ENST00000468949 MMP1P03956 469 aa9.3□□□□□ -0.92
HDAC6-216ENST00000468949 ERCC3P19447 782 aa9.3□□□□□ -0.92
HDAC6-216ENST00000468949 SYT1P21579 422 aa9.3□□□□□ -0.92
HDAC6-216ENST00000468949 MAPK4P31152 587 aa9.3□□□□□ -0.92
HDAC6-216ENST00000468949 TEX2Q8IWB9 1127 aa9.3□□□□□ -0.92
HDAC6-216ENST00000468949 DIS3L2Q8IYB7 885 aaKnown RBP9.3□□□□□ -0.92
HDAC6-216ENST00000468949 BLIDQ8IZY5 108 aa9.3□□□□□ -0.92
HDAC6-216ENST00000468949 SHCBP1Q8NEM2 672 aa9.3□□□□□ -0.92
HDAC6-216ENST00000468949 REPS2Q8NFH8 660 aa9.3□□□□□ -0.92
HDAC6-216ENST00000468949 FBXO18Q8NFZ0 1043 aa9.3□□□□□ -0.92
HDAC6-216ENST00000468949 MMP19Q99542 508 aa9.3□□□□□ -0.92
HDAC6-216ENST00000468949 MPHOSPH6Q99547 160 aaKnown RBP9.3□□□□□ -0.92
HDAC6-216ENST00000468949 MOV10L1Q9BXT6 1211 aaKnown RBP9.3□□□□□ -0.92
HDAC6-216ENST00000468949 MROH8Q9H579 483 aa9.3□□□□□ -0.92
HDAC6-216ENST00000468949 EFCC1Q9HA90 598 aa9.3□□□□□ -0.92
HDAC6-216ENST00000468949 RIC8AQ9NPQ8 531 aa9.3□□□□□ -0.92
HDAC6-216ENST00000468949 MORF4L1Q9UBU8 362 aa9.3□□□□□ -0.92
HDAC6-216ENST00000468949 NOL7Q9UMY1 257 aaKnown RBP9.3□□□□□ -0.92
HDAC6-216ENST00000468949 PCDHA4Q9UN74 947 aa9.3□□□□□ -0.92
HDAC6-216ENST00000468949 ADAMTS5Q9UNA0 930 aa9.3□□□□□ -0.92
HDAC6-216ENST00000468949 ATP6V1DQ9Y5K8 247 aa9.3□□□□□ -0.92
HDAC6-216ENST00000468949 A0A0G2JMZ2 1700 aa9.3□□□□□ -0.92
HDAC6-216ENST00000468949 MGAMO43451 1857 aa9.3□□□□□ -0.92
HDAC6-216ENST00000468949 ZNF536O15090 1300 aa9.3□□□□□ -0.92
HDAC6-216ENST00000468949 GTPBP6O43824 516 aaPredicted RBP9.29□□□□□ -0.92
HDAC6-216ENST00000468949 GNRH1P01148 92 aa9.29□□□□□ -0.92
HDAC6-216ENST00000468949 FCER1AP12319 257 aa9.29□□□□□ -0.92
HDAC6-216ENST00000468949 TAL1P17542 331 aaPredicted RBP9.29□□□□□ -0.92
HDAC6-216ENST00000468949 PSEN1P49768 467 aa9.29□□□□□ -0.92
HDAC6-216ENST00000468949 AP3B2Q13367 1082 aa9.29□□□□□ -0.92
HDAC6-216ENST00000468949 UBE2SQ16763 222 aa9.29□□□□□ -0.92
HDAC6-216ENST00000468949 FOXD4L5Q5VV16 416 aaPredicted RBP9.29□□□□□ -0.92
HDAC6-216ENST00000468949 C17orf99Q6UX52 265 aa9.29□□□□□ -0.92
HDAC6-216ENST00000468949 RNF207Q6ZRF8 634 aa9.29□□□□□ -0.92
HDAC6-216ENST00000468949 KRT25Q7Z3Z0 450 aa9.29□□□□□ -0.92
HDAC6-216ENST00000468949 SAMD3Q8N6K7 520 aa9.29□□□□□ -0.92
HDAC6-216ENST00000468949 DAGLBQ8NCG7 672 aa9.29□□□□□ -0.92
HDAC6-216ENST00000468949 RGS22Q8NE09 1264 aa9.29□□□□□ -0.92
HDAC6-216ENST00000468949 FOXD4L4Q8WXT5 416 aaPredicted RBP9.29□□□□□ -0.92
HDAC6-216ENST00000468949 PHF20Q9BVI0 1012 aa9.29□□□□□ -0.92
HDAC6-216ENST00000468949 ZMYND12Q9H0C1 365 aa9.29□□□□□ -0.92
HDAC6-216ENST00000468949 TXNRD2Q9NNW7 524 aa9.29□□□□□ -0.92
HDAC6-216ENST00000468949 SLC5A4Q9NY91 659 aa9.29□□□□□ -0.92
HDAC6-216ENST00000468949 CHMP5Q9NZZ3 219 aa9.29□□□□□ -0.92
HDAC6-216ENST00000468949 RBPJLQ9UBG7 517 aa9.29□□□□□ -0.92
HDAC6-216ENST00000468949 MYH6P13533 1939 aa9.29□□□□□ -0.92
HDAC6-216ENST00000468949 C19orf67A6NJJ6 358 aa9.28□□□□□ -0.92
HDAC6-216ENST00000468949 B4DLN1 442 aa9.28□□□□□ -0.92
HDAC6-216ENST00000468949 POTEB2H3BUK9 544 aa9.28□□□□□ -0.92
HDAC6-216ENST00000468949 NFIBO00712 420 aa9.28□□□□□ -0.92
HDAC6-216ENST00000468949 TNPO2O14787 897 aaKnown RBP9.28□□□□□ -0.92
HDAC6-216ENST00000468949 CNMDO75829 334 aa9.28□□□□□ -0.92
HDAC6-216ENST00000468949 FOSP01100 380 aaPredicted RBP9.28□□□□□ -0.92
HDAC6-216ENST00000468949 ZSCAN22P10073 491 aaPredicted RBP9.28□□□□□ -0.92
HDAC6-216ENST00000468949 BCRP11274 1271 aa9.28□□□□□ -0.92
HDAC6-216ENST00000468949 HOXA13P31271 388 aaPredicted RBP9.28□□□□□ -0.92
HDAC6-216ENST00000468949 PRMT2P55345 433 aa9.28□□□□□ -0.92
HDAC6-216ENST00000468949 FCGRTP55899 365 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms