RNA–Protein interactions for RNA: ENST00000468770.1

SNRPD3-205, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 1 (best)

Gene SNRPD3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-205ENST00000468770 MCF2L2Q86YR7 1114 aa8.38□□□□□ -1.07
SNRPD3-205ENST00000468770 RGS22Q8NE09 1264 aa8.38□□□□□ -1.07
SNRPD3-205ENST00000468770 NCOA7Q8NI08 942 aa8.38□□□□□ -1.07
SNRPD3-205ENST00000468770 MORC4Q8TE76 937 aa8.38□□□□□ -1.07
SNRPD3-205ENST00000468770 MAP4K1Q92918 833 aa8.38□□□□□ -1.07
SNRPD3-205ENST00000468770 TRIM43Q96BQ3 446 aaPredicted RBP8.38□□□□□ -1.07
SNRPD3-205ENST00000468770 WDR11Q9BZH6 1224 aa8.38□□□□□ -1.07
SNRPD3-205ENST00000468770 PDLIM7Q9NR12 457 aa8.38□□□□□ -1.07
SNRPD3-205ENST00000468770 GNEQ9Y223 722 aaKnown RBP8.38□□□□□ -1.07
SNRPD3-205ENST00000468770 Q9Y3F1 56 aa8.38□□□□□ -1.07
SNRPD3-205ENST00000468770 MCM3APO60318 1980 aa8.38□□□□□ -1.07
SNRPD3-205ENST00000468770 ABCB11O95342 1321 aa8.37□□□□□ -1.07
SNRPD3-205ENST00000468770 MROH7Q68CQ1 1323 aa8.37□□□□□ -1.07
SNRPD3-205ENST00000468770 A0A0U1RQG5 324 aaPredicted RBP8.37□□□□□ -1.07
SNRPD3-205ENST00000468770 KLRF2D3W0D1 207 aa8.37□□□□□ -1.07
SNRPD3-205ENST00000468770 E7EWF7 191 aa8.37□□□□□ -1.07
SNRPD3-205ENST00000468770 ARVCFO00192 962 aa8.37□□□□□ -1.07
SNRPD3-205ENST00000468770 CTAGE5O15320 804 aa8.37□□□□□ -1.07
SNRPD3-205ENST00000468770 CABYRO75952 493 aa8.37□□□□□ -1.07
SNRPD3-205ENST00000468770 NKX3-2P78367 333 aa8.37□□□□□ -1.07
SNRPD3-205ENST00000468770 FAAP100Q0VG06 881 aa8.37□□□□□ -1.07
SNRPD3-205ENST00000468770 WTAPQ15007 396 aa8.37□□□□□ -1.07
SNRPD3-205ENST00000468770 SEC23AQ15436 765 aa8.37□□□□□ -1.07
SNRPD3-205ENST00000468770 FSCN1Q16658 493 aaKnown RBP8.37□□□□□ -1.07
SNRPD3-205ENST00000468770 QRICH1Q2TAL8 776 aa8.37□□□□□ -1.07
SNRPD3-205ENST00000468770 DUSP28Q4G0W2 176 aa8.37□□□□□ -1.07
SNRPD3-205ENST00000468770 GPR153Q6NV75 609 aa8.37□□□□□ -1.07
SNRPD3-205ENST00000468770 CXCL17Q6UXB2 119 aa8.37□□□□□ -1.07
SNRPD3-205ENST00000468770 FBXO11Q86XK2 927 aa8.37□□□□□ -1.07
SNRPD3-205ENST00000468770 STAG2Q8N3U4 1231 aa8.37□□□□□ -1.07
SNRPD3-205ENST00000468770 DNERQ8NFT8 737 aa8.37□□□□□ -1.07
SNRPD3-205ENST00000468770 MAF1Q9H063 256 aa8.37□□□□□ -1.07
SNRPD3-205ENST00000468770 JMJD4Q9H9V9 463 aa8.37□□□□□ -1.07
SNRPD3-205ENST00000468770 MRPL11Q9Y3B7 192 aaKnown RBP8.37□□□□□ -1.07
SNRPD3-205ENST00000468770 SZT2Q5T011 3432 aa8.37□□□□□ -1.07
SNRPD3-205ENST00000468770 DNAH12Q6ZR08 3092 aa8.37□□□□□ -1.07
SNRPD3-205ENST00000468770 LAMA3Q16787 3333 aa8.36□□□□□ -1.07
SNRPD3-205ENST00000468770 PALM3A6NDB9 673 aaPredicted RBP8.36□□□□□ -1.07
SNRPD3-205ENST00000468770 KIAA0355O15063 1070 aa8.36□□□□□ -1.07
SNRPD3-205ENST00000468770 TLR3O15455 904 aaKnown RBP8.36□□□□□ -1.07
SNRPD3-205ENST00000468770 PTGS1P23219 599 aa8.36□□□□□ -1.07
SNRPD3-205ENST00000468770 CDK7P50613 346 aa8.36□□□□□ -1.07
SNRPD3-205ENST00000468770 SHHQ15465 462 aa8.36□□□□□ -1.07
SNRPD3-205ENST00000468770 BRDTQ58F21 947 aaPredicted RBP8.36□□□□□ -1.07
SNRPD3-205ENST00000468770 TMEM67Q5HYA8 995 aa8.36□□□□□ -1.07
SNRPD3-205ENST00000468770 TMEM63BQ5T3F8 832 aa8.36□□□□□ -1.07
SNRPD3-205ENST00000468770 CENPQQ7L2Z9 268 aaPredicted RBP8.36□□□□□ -1.07
SNRPD3-205ENST00000468770 CHST3Q7LGC8 479 aa8.36□□□□□ -1.07
SNRPD3-205ENST00000468770 CATIPQ7Z7H3 387 aa8.36□□□□□ -1.07
SNRPD3-205ENST00000468770 NSUN6Q8TEA1 469 aaKnown RBP8.36□□□□□ -1.07
SNRPD3-205ENST00000468770 TBC1D5Q92609 795 aa8.36□□□□□ -1.07
SNRPD3-205ENST00000468770 AMNQ9BXJ7 453 aa8.36□□□□□ -1.07
SNRPD3-205ENST00000468770 MAD2L2Q9UI95 211 aa8.36□□□□□ -1.07
SNRPD3-205ENST00000468770 RBM8AQ9Y5S9 174 aaKnown RBP8.36□□□□□ -1.07
SNRPD3-205ENST00000468770 LAMA4Q16363 1823 aa8.36□□□□□ -1.07
SNRPD3-205ENST00000468770 RBM47A0AV96 593 aaKnown RBP8.35□□□□□ -1.07
SNRPD3-205ENST00000468770 ZBTB5O15062 677 aa8.35□□□□□ -1.07
SNRPD3-205ENST00000468770 NKRFO15226 690 aaKnown RBP eCLIP8.35□□□□□ -1.07
SNRPD3-205ENST00000468770 CFBP00751 764 aa8.35□□□□□ -1.07
SNRPD3-205ENST00000468770 TIMP1P01033 207 aa8.35□□□□□ -1.07
SNRPD3-205ENST00000468770 TXNP10599 105 aaKnown RBP8.35□□□□□ -1.07
SNRPD3-205ENST00000468770 EDNRBP24530 442 aa8.35□□□□□ -1.07
SNRPD3-205ENST00000468770 ITGB8P26012 769 aa8.35□□□□□ -1.07
SNRPD3-205ENST00000468770 CPT1AP50416 773 aa8.35□□□□□ -1.07
SNRPD3-205ENST00000468770 FPGSQ05932 587 aa8.35□□□□□ -1.07
SNRPD3-205ENST00000468770 TRAF1Q13077 416 aa8.35□□□□□ -1.07
SNRPD3-205ENST00000468770 ITGA7Q13683 1181 aa8.35□□□□□ -1.07
SNRPD3-205ENST00000468770 TTLL4Q14679 1199 aa8.35□□□□□ -1.07
SNRPD3-205ENST00000468770 PPP2R5BQ15173 497 aa8.35□□□□□ -1.07
SNRPD3-205ENST00000468770 C9orf50Q5SZB4 431 aa8.35□□□□□ -1.07
SNRPD3-205ENST00000468770 ARHGEF16Q5VV41 709 aa8.35□□□□□ -1.07
SNRPD3-205ENST00000468770 CASC1Q6TDU7 716 aa8.35□□□□□ -1.07
SNRPD3-205ENST00000468770 STOX1Q6ZVD7 989 aa8.35□□□□□ -1.07
SNRPD3-205ENST00000468770 DEFB123Q8N688 67 aa8.35□□□□□ -1.07
SNRPD3-205ENST00000468770 OR6J1Q8NGC5 347 aa8.35□□□□□ -1.07
SNRPD3-205ENST00000468770 SYTL5Q8TDW5 730 aaPredicted RBP8.35□□□□□ -1.07
SNRPD3-205ENST00000468770 SCFD2Q8WU76 684 aa8.35□□□□□ -1.07
SNRPD3-205ENST00000468770 TAAR1Q96RJ0 339 aa8.35□□□□□ -1.07
SNRPD3-205ENST00000468770 RMDN3Q96TC7 470 aa8.35□□□□□ -1.07
SNRPD3-205ENST00000468770 SEZ6LQ9BYH1 1024 aa8.35□□□□□ -1.07
SNRPD3-205ENST00000468770 GPHNQ9NQX3 736 aaPredicted RBP8.35□□□□□ -1.07
SNRPD3-205ENST00000468770 PCDHA1Q9Y5I3 950 aa8.35□□□□□ -1.07
SNRPD3-205ENST00000468770 TAF6LQ9Y6J9 622 aa8.35□□□□□ -1.07
SNRPD3-205ENST00000468770 MYL3P08590 195 aa8.34□□□□□ -1.07
SNRPD3-205ENST00000468770 MCM5P33992 734 aa8.34□□□□□ -1.07
SNRPD3-205ENST00000468770 PSMC6P62333 389 aa8.34□□□□□ -1.07
SNRPD3-205ENST00000468770 TROAPQ12815 778 aa8.34□□□□□ -1.07
SNRPD3-205ENST00000468770 GRM4Q14833 912 aa8.34□□□□□ -1.07
SNRPD3-205ENST00000468770 STXBP2Q15833 593 aa8.34□□□□□ -1.07
SNRPD3-205ENST00000468770 BMP2KLQ5H9B9 411 aa8.34□□□□□ -1.07
SNRPD3-205ENST00000468770 MFSD5Q6N075 450 aa8.34□□□□□ -1.07
SNRPD3-205ENST00000468770 SEPT14Q6ZU15 432 aa8.34□□□□□ -1.07
SNRPD3-205ENST00000468770 HOMER1Q86YM7 354 aa8.34□□□□□ -1.07
SNRPD3-205ENST00000468770 FAM126BQ8IXS8 530 aa8.34□□□□□ -1.07
SNRPD3-205ENST00000468770 MB21D2Q8IYB1 491 aaPredicted RBP8.34□□□□□ -1.07
SNRPD3-205ENST00000468770 TMTC2Q8N394 836 aa8.34□□□□□ -1.07
SNRPD3-205ENST00000468770 TMEM199Q8N511 208 aa8.34□□□□□ -1.07
SNRPD3-205ENST00000468770 IGDCC4Q8TDY8 1250 aa8.34□□□□□ -1.07
SNRPD3-205ENST00000468770 MTMR8Q96EF0 704 aa8.34□□□□□ -1.07
SNRPD3-205ENST00000468770 IWS1Q96ST2 819 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms