RNA–Protein interactions for RNA: ENST00000467681.5

SSBP1-206, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-206ENST00000467681 GHRHRQ02643 423 aa15.75■□□□□ 0.11
SSBP1-206ENST00000467681 ANKRD1Q15327 319 aa15.75■□□□□ 0.11
SSBP1-206ENST00000467681 SYTL5Q8TDW5 730 aaPredicted RBP15.75■□□□□ 0.11
SSBP1-206ENST00000467681 DEFB118Q96PH6 123 aa15.75■□□□□ 0.11
SSBP1-206ENST00000467681 PURBQ96QR8 312 aaKnown RBP15.75■□□□□ 0.11
SSBP1-206ENST00000467681 MAP3K20Q9NYL2 800 aaKnown RBP15.75■□□□□ 0.11
SSBP1-206ENST00000467681 ADD3Q9UEY8 706 aaKnown RBP15.75■□□□□ 0.11
SSBP1-206ENST00000467681 SEC63Q9UGP8 760 aaKnown RBP15.75■□□□□ 0.11
SSBP1-206ENST00000467681 SYNGAP1Q96PV0 1343 aa15.74■□□□□ 0.11
SSBP1-206ENST00000467681 CYBAP13498 195 aa15.74■□□□□ 0.11
SSBP1-206ENST00000467681 CAPN2P17655 700 aa15.74■□□□□ 0.11
SSBP1-206ENST00000467681 EN2P19622 333 aaPredicted RBP15.74■□□□□ 0.11
SSBP1-206ENST00000467681 GJA8P48165 433 aa15.74■□□□□ 0.11
SSBP1-206ENST00000467681 CCT2P78371 535 aaKnown RBP15.74■□□□□ 0.11
SSBP1-206ENST00000467681 SLC30A10Q6XR72 485 aa15.74■□□□□ 0.11
SSBP1-206ENST00000467681 MORC4Q8TE76 937 aa15.74■□□□□ 0.11
SSBP1-206ENST00000467681 U2AF1L4Q8WU68 220 aaKnown RBP15.74■□□□□ 0.11
SSBP1-206ENST00000467681 KIF2CQ99661 725 aa15.74■□□□□ 0.11
SSBP1-206ENST00000467681 LOC102724159A0A0B4J2E5 919 aa15.73■□□□□ 0.11
SSBP1-206ENST00000467681 hCG_1642624A0A1W2PR95 340 aa15.73■□□□□ 0.11
SSBP1-206ENST00000467681 RGS19P49795 217 aa15.73■□□□□ 0.11
SSBP1-206ENST00000467681 HSD17B4P51659 736 aa15.73■□□□□ 0.11
SSBP1-206ENST00000467681 AK2P54819 239 aa15.73■□□□□ 0.11
SSBP1-206ENST00000467681 PWP2Q15269 919 aaKnown RBP15.73■□□□□ 0.11
SSBP1-206ENST00000467681 NTRK3Q16288 839 aa15.73■□□□□ 0.11
SSBP1-206ENST00000467681 ARMCX2Q7L311 632 aa15.73■□□□□ 0.11
SSBP1-206ENST00000467681 DNERQ8NFT8 737 aa15.73■□□□□ 0.11
SSBP1-206ENST00000467681 BACH2Q9BYV9 841 aa15.73■□□□□ 0.11
SSBP1-206ENST00000467681 CRISPLD2Q9H0B8 497 aa15.73■□□□□ 0.11
SSBP1-206ENST00000467681 UPF2Q9HAU5 1272 aaKnown RBP15.73■□□□□ 0.11
SSBP1-206ENST00000467681 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.73■□□□□ 0.11
SSBP1-206ENST00000467681 TPCN1Q9ULQ1 816 aa15.73■□□□□ 0.11
SSBP1-206ENST00000467681 CNPY2Q9Y2B0 182 aa15.73■□□□□ 0.11
SSBP1-206ENST00000467681 NID2Q14112 1375 aa15.73■□□□□ 0.11
SSBP1-206ENST00000467681 ZNF236Q9UL36 1845 aa15.73■□□□□ 0.11
SSBP1-206ENST00000467681 ASTN1O14525 1302 aa15.72■□□□□ 0.11
SSBP1-206ENST00000467681 CNTNAP5Q8WYK1 1306 aa15.72■□□□□ 0.11
SSBP1-206ENST00000467681 GCOM1H8Y6P7 765 aaPredicted RBP15.72■□□□□ 0.11
SSBP1-206ENST00000467681 PRPF3O43395 683 aaKnown RBP15.72■□□□□ 0.11
SSBP1-206ENST00000467681 CFBP00751 764 aa15.72■□□□□ 0.11
SSBP1-206ENST00000467681 TFRCP02786 760 aaKnown RBP15.72■□□□□ 0.11
SSBP1-206ENST00000467681 POLR2MP0CAP2 368 aa15.72■□□□□ 0.11
SSBP1-206ENST00000467681 ZNF865P0CJ78 1059 aaPredicted RBP15.72■□□□□ 0.11
SSBP1-206ENST00000467681 CNGA1P29973 690 aa15.72■□□□□ 0.11
SSBP1-206ENST00000467681 LHX8Q68G74 356 aa15.72■□□□□ 0.11
SSBP1-206ENST00000467681 TAAR1Q96RJ0 339 aa15.72■□□□□ 0.11
SSBP1-206ENST00000467681 ABHD16BQ9H3Z7 469 aa15.72■□□□□ 0.11
SSBP1-206ENST00000467681 NCOA5Q9HCD5 579 aaKnown RBP15.72■□□□□ 0.11
SSBP1-206ENST00000467681 B4DLN1 442 aa15.71■□□□□ 0.11
SSBP1-206ENST00000467681 SEPT4O43236 478 aa15.71■□□□□ 0.11
SSBP1-206ENST00000467681 MSCO60682 206 aa15.71■□□□□ 0.11
SSBP1-206ENST00000467681 PFKFB2O60825 505 aa15.71■□□□□ 0.11
SSBP1-206ENST00000467681 IFNAR1P17181 557 aa15.71■□□□□ 0.11
SSBP1-206ENST00000467681 ALDH5A1P51649 535 aaPredicted RBP15.71■□□□□ 0.11
SSBP1-206ENST00000467681 MRPL12P52815 198 aaKnown RBP15.71■□□□□ 0.11
SSBP1-206ENST00000467681 ACVR2BQ13705 512 aa15.71■□□□□ 0.11
SSBP1-206ENST00000467681 NSUN6Q8TEA1 469 aaKnown RBP15.71■□□□□ 0.11
SSBP1-206ENST00000467681 KATNBL1Q9H079 304 aa15.71■□□□□ 0.11
SSBP1-206ENST00000467681 SLKQ9H2G2 1235 aaPredicted RBP15.71■□□□□ 0.11
SSBP1-206ENST00000467681 PSTPIP2Q9H939 334 aa15.71■□□□□ 0.11
SSBP1-206ENST00000467681 COL20A1Q9P218 1284 aa15.71■□□□□ 0.11
SSBP1-206ENST00000467681 DDX20Q9UHI6 824 aaKnown RBP15.71■□□□□ 0.11
SSBP1-206ENST00000467681 HOXA13P31271 388 aaPredicted RBP15.7■□□□□ 0.1
SSBP1-206ENST00000467681 HEATR3Q7Z4Q2 680 aa15.7■□□□□ 0.1
SSBP1-206ENST00000467681 IWS1Q96ST2 819 aa15.7■□□□□ 0.1
SSBP1-206ENST00000467681 RMDN3Q96TC7 470 aa15.7■□□□□ 0.1
SSBP1-206ENST00000467681 RBM27Q9P2N5 1060 aaKnown RBP15.7■□□□□ 0.1
SSBP1-206ENST00000467681 OGDHLQ9ULD0 1010 aa15.7■□□□□ 0.1
SSBP1-206ENST00000467681 FAM184BQ9ULE4 1060 aa15.7■□□□□ 0.1
SSBP1-206ENST00000467681 DDX49Q9Y6V7 483 aaKnown RBP15.7■□□□□ 0.1
SSBP1-206ENST00000467681 MYH6P13533 1939 aa15.7■□□□□ 0.1
SSBP1-206ENST00000467681 PIK3CDO00329 1044 aa15.69■□□□□ 0.1
SSBP1-206ENST00000467681 CPLX1O14810 134 aa15.69■□□□□ 0.1
SSBP1-206ENST00000467681 EDNRBP24530 442 aa15.69■□□□□ 0.1
SSBP1-206ENST00000467681 AKAP17AQ02040 695 aaKnown RBP15.69■□□□□ 0.1
SSBP1-206ENST00000467681 STK3Q13188 491 aa15.69■□□□□ 0.1
SSBP1-206ENST00000467681 PKN1Q16512 942 aa15.69■□□□□ 0.1
SSBP1-206ENST00000467681 PFKFB3Q16875 520 aaPredicted RBP15.69■□□□□ 0.1
SSBP1-206ENST00000467681 WWC2Q6AWC2 1192 aa15.69■□□□□ 0.1
SSBP1-206ENST00000467681 CPLX2Q6PUV4 134 aaKnown RBP15.69■□□□□ 0.1
SSBP1-206ENST00000467681 GPKOWQ92917 476 aaPredicted RBP eCLIP15.69■□□□□ 0.15e-7■■■■■ 43.5
SSBP1-206ENST00000467681 PHKBQ93100 1093 aa15.69■□□□□ 0.1
SSBP1-206ENST00000467681 SHISA4Q96DD7 197 aa15.69■□□□□ 0.1
SSBP1-206ENST00000467681 MPHOSPH6Q99547 160 aaKnown RBP15.69■□□□□ 0.1
SSBP1-206ENST00000467681 RNF26Q9BY78 433 aaPredicted RBP15.69■□□□□ 0.1
SSBP1-206ENST00000467681 hCG_1984214I3L0E3 225 aa15.68■□□□□ 0.1
SSBP1-206ENST00000467681 MEIS2O14770 477 aa15.68■□□□□ 0.1
SSBP1-206ENST00000467681 SCG2P13521 617 aa15.68■□□□□ 0.1
SSBP1-206ENST00000467681 PDE4DQ08499 809 aa15.68■□□□□ 0.1
SSBP1-206ENST00000467681 SSRP1Q08945 709 aaKnown RBP15.68■□□□□ 0.1
SSBP1-206ENST00000467681 SCRN1Q12765 414 aa15.68■□□□□ 0.1
SSBP1-206ENST00000467681 RABEP1Q15276 862 aa15.68■□□□□ 0.1
SSBP1-206ENST00000467681 ME3Q16798 604 aa15.68■□□□□ 0.1
SSBP1-206ENST00000467681 ARHGEF16Q5VV41 709 aa15.68■□□□□ 0.1
SSBP1-206ENST00000467681 IQSEC1Q6DN90 963 aa15.68■□□□□ 0.1
SSBP1-206ENST00000467681 TAPT1Q6NXT6 567 aa15.68■□□□□ 0.1
SSBP1-206ENST00000467681 USP17L6PQ6QN14 398 aa15.68■□□□□ 0.1
SSBP1-206ENST00000467681 FCHSD1Q86WN1 690 aa15.68■□□□□ 0.1
SSBP1-206ENST00000467681 TEX2Q8IWB9 1127 aa15.68■□□□□ 0.1
SSBP1-206ENST00000467681 ZNF713Q8N859 430 aaPredicted RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 133.5 ms