RNA–Protein interactions for RNA: ENST00000467563.3

CHRNA4-203, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,098 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-203ENST00000467563 SH3RF1Q7Z6J0 888 aa21.27■□□□□ 0.99
CHRNA4-203ENST00000467563 CRYGNQ8WXF5 182 aa21.27■□□□□ 0.99
CHRNA4-203ENST00000467563 SLF1Q9BQI6 1058 aa21.27■□□□□ 0.99
CHRNA4-203ENST00000467563 ZHX2Q9Y6X8 837 aa21.27■□□□□ 0.99
CHRNA4-203ENST00000467563 AP5Z1O43299 807 aa21.26■□□□□ 0.99
CHRNA4-203ENST00000467563 USP14P54578 494 aa21.26■□□□□ 0.99
CHRNA4-203ENST00000467563 TRAF1Q13077 416 aa21.26■□□□□ 0.99
CHRNA4-203ENST00000467563 KARSQ15046 597 aaKnown RBP21.26■□□□□ 0.99
CHRNA4-203ENST00000467563 SULF1Q8IWU6 871 aa21.26■□□□□ 0.99
CHRNA4-203ENST00000467563 PRPF38AQ8NAV1 312 aaKnown RBP21.26■□□□□ 0.99
CHRNA4-203ENST00000467563 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.26■□□□□ 0.99
CHRNA4-203ENST00000467563 PAGE5Q96GU1 130 aa21.26■□□□□ 0.99
CHRNA4-203ENST00000467563 AS3MTQ9HBK9 375 aa21.26■□□□□ 0.99
CHRNA4-203ENST00000467563 DDX25Q9UHL0 483 aaKnown RBP21.26■□□□□ 0.99
CHRNA4-203ENST00000467563 PIK3CDO00329 1044 aa21.25■□□□□ 0.99
CHRNA4-203ENST00000467563 TECP42680 631 aa21.25■□□□□ 0.99
CHRNA4-203ENST00000467563 NOL9Q5SY16 702 aaKnown RBP21.25■□□□□ 0.99
CHRNA4-203ENST00000467563 LDHDQ86WU2 507 aa21.25■□□□□ 0.99
CHRNA4-203ENST00000467563 CEP57L1Q8IYX8 460 aa21.25■□□□□ 0.99
CHRNA4-203ENST00000467563 IQUBQ8NA54 791 aa21.25■□□□□ 0.99
CHRNA4-203ENST00000467563 TBC1D5Q92609 795 aa21.25■□□□□ 0.99
CHRNA4-203ENST00000467563 TANGO6Q9C0B7 1094 aa21.25■□□□□ 0.99
CHRNA4-203ENST00000467563 ZNF536O15090 1300 aa21.25■□□□□ 0.99
CHRNA4-203ENST00000467563 TXLNAP40222 546 aa21.25■□□□□ 0.99
CHRNA4-203ENST00000467563 TXKP42681 527 aa21.25■□□□□ 0.99
CHRNA4-203ENST00000467563 AFMP43652 599 aa21.25■□□□□ 0.99
CHRNA4-203ENST00000467563 SARSP49591 514 aaKnown RBP21.25■□□□□ 0.99
CHRNA4-203ENST00000467563 NT5DC1Q5TFE4 455 aa21.25■□□□□ 0.99
CHRNA4-203ENST00000467563 MCTP2Q6DN12 878 aa21.25■□□□□ 0.99
CHRNA4-203ENST00000467563 PDXDC2PQ6P474 469 aa21.25■□□□□ 0.99
CHRNA4-203ENST00000467563 AK8Q96MA6 479 aa21.25■□□□□ 0.99
CHRNA4-203ENST00000467563 CCSER1Q9C0I3 900 aa21.25■□□□□ 0.99
CHRNA4-203ENST00000467563 RPAP3Q9H6T3 665 aaPredicted RBP21.25■□□□□ 0.99
CHRNA4-203ENST00000467563 GCFC2P16383 781 aaKnown RBP21.24■□□□□ 0.99
CHRNA4-203ENST00000467563 UBA7P41226 1012 aa21.24■□□□□ 0.99
CHRNA4-203ENST00000467563 USP11P51784 963 aa21.24■□□□□ 0.99
CHRNA4-203ENST00000467563 ARHGAP4P98171 946 aa21.24■□□□□ 0.99
CHRNA4-203ENST00000467563 DHX40Q8IX18 779 aaKnown RBP21.24■□□□□ 0.99
CHRNA4-203ENST00000467563 IGSF22Q8N9C0 903 aa21.24■□□□□ 0.99
CHRNA4-203ENST00000467563 SPATA20Q8TB22 786 aa21.24■□□□□ 0.99
CHRNA4-203ENST00000467563 AGBL1Q96MI9 1066 aa21.24■□□□□ 0.99
CHRNA4-203ENST00000467563 DISC1Q9NRI5 854 aa21.24■□□□□ 0.99
CHRNA4-203ENST00000467563 SPDYE3A6NKU9 549 aa21.24■□□□□ 0.99
CHRNA4-203ENST00000467563 FLOT1O75955 427 aa21.24■□□□□ 0.99
CHRNA4-203ENST00000467563 FOSP01100 380 aaPredicted RBP21.24■□□□□ 0.99
CHRNA4-203ENST00000467563 KRT26Q7Z3Y9 468 aa21.24■□□□□ 0.99
CHRNA4-203ENST00000467563 PYM1Q9BRP8 204 aaKnown RBP21.24■□□□□ 0.99
CHRNA4-203ENST00000467563 ICAM1P05362 532 aa21.23■□□□□ 0.99
CHRNA4-203ENST00000467563 BMP6P22004 513 aa21.23■□□□□ 0.99
CHRNA4-203ENST00000467563 CASP1P29466 404 aa21.23■□□□□ 0.99
CHRNA4-203ENST00000467563 EPHX2P34913 555 aa21.23■□□□□ 0.99
CHRNA4-203ENST00000467563 SREBF1P36956 1147 aa21.23■□□□□ 0.99
CHRNA4-203ENST00000467563 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.23■□□□□ 0.99
CHRNA4-203ENST00000467563 HAS1Q92839 578 aa21.23■□□□□ 0.99
CHRNA4-203ENST00000467563 MTRQ99707 1265 aa21.23■□□□□ 0.99
CHRNA4-203ENST00000467563 NAT10Q9H0A0 1025 aaKnown RBP21.23■□□□□ 0.99
CHRNA4-203ENST00000467563 MAN1B1Q9UKM7 699 aa21.23■□□□□ 0.99
CHRNA4-203ENST00000467563 PPP1R9AQ9ULJ8 1098 aa21.23■□□□□ 0.99
CHRNA4-203ENST00000467563 MRPL11Q9Y3B7 192 aaKnown RBP21.23■□□□□ 0.99
CHRNA4-203ENST00000467563 PHIPQ8WWQ0 1821 aa21.23■□□□□ 0.99
CHRNA4-203ENST00000467563 CYP3A7-CYP3A51PA0A087WV96 503 aa21.22■□□□□ 0.99
CHRNA4-203ENST00000467563 GLTPD2A6NH11 291 aa21.22■□□□□ 0.99
CHRNA4-203ENST00000467563 CFBP00751 764 aa21.22■□□□□ 0.99
CHRNA4-203ENST00000467563 CYP3A7P24462 503 aa21.22■□□□□ 0.99
CHRNA4-203ENST00000467563 FXR2P51116 673 aaKnown RBP eCLIP21.22■□□□□ 0.99
CHRNA4-203ENST00000467563 HMGCS2P54868 508 aa21.22■□□□□ 0.99
CHRNA4-203ENST00000467563 NAALADL2Q58DX5 795 aa21.22■□□□□ 0.99
CHRNA4-203ENST00000467563 USP50Q70EL3 339 aaPredicted RBP21.22■□□□□ 0.99
CHRNA4-203ENST00000467563 STAMQ92783 540 aa21.22■□□□□ 0.99
CHRNA4-203ENST00000467563 SMARCE1Q969G3 411 aa21.22■□□□□ 0.99
CHRNA4-203ENST00000467563 CCDC34Q96HJ3 373 aa21.22■□□□□ 0.99
CHRNA4-203ENST00000467563 MBOAT7Q96N66 472 aa21.22■□□□□ 0.99
CHRNA4-203ENST00000467563 NAP1L4Q99733 375 aaKnown RBP21.22■□□□□ 0.99
CHRNA4-203ENST00000467563 ABCB11O95342 1321 aa21.22■□□□□ 0.99
CHRNA4-203ENST00000467563 ADCY5O95622 1261 aa21.22■□□□□ 0.99
CHRNA4-203ENST00000467563 PLCB2Q00722 1185 aa21.22■□□□□ 0.99
CHRNA4-203ENST00000467563 GJA10Q969M2 543 aa21.22■□□□□ 0.99
CHRNA4-203ENST00000467563 SLC38A10Q9HBR0 1119 aa21.22■□□□□ 0.99
CHRNA4-203ENST00000467563 CCPG1Q9ULG6 757 aa21.22■□□□□ 0.99
CHRNA4-203ENST00000467563 STAT6P42226 847 aa21.21■□□□□ 0.99
CHRNA4-203ENST00000467563 VGLL4Q14135 290 aa21.21■□□□□ 0.99
CHRNA4-203ENST00000467563 CABP7Q86V35 215 aa21.21■□□□□ 0.99
CHRNA4-203ENST00000467563 FCHSD1Q86WN1 690 aa21.21■□□□□ 0.99
CHRNA4-203ENST00000467563 TEX2Q8IWB9 1127 aa21.21■□□□□ 0.99
CHRNA4-203ENST00000467563 AOPEPQ8N6M6 819 aa21.21■□□□□ 0.99
CHRNA4-203ENST00000467563 LRRC15Q8TF66 581 aa21.21■□□□□ 0.99
CHRNA4-203ENST00000467563 C12orf42Q96LP6 360 aa21.21■□□□□ 0.99
CHRNA4-203ENST00000467563 MMTAG2Q9BU76 263 aaKnown RBP21.21■□□□□ 0.99
CHRNA4-203ENST00000467563 AFG3L2Q9Y4W6 797 aa21.21■□□□□ 0.99
CHRNA4-203ENST00000467563 SNCAIPQ9Y6H5 919 aa21.21■□□□□ 0.99
CHRNA4-203ENST00000467563 GCOM1H8Y6P7 765 aaPredicted RBP21.2■□□□□ 0.99
CHRNA4-203ENST00000467563 POLR2MP0CAP2 368 aa21.2■□□□□ 0.99
CHRNA4-203ENST00000467563 MAP3K9P80192 1104 aa21.2■□□□□ 0.99
CHRNA4-203ENST00000467563 DPYDQ12882 1025 aa21.2■□□□□ 0.99
CHRNA4-203ENST00000467563 RRAGBQ5VZM2 374 aa21.2■□□□□ 0.99
CHRNA4-203ENST00000467563 MOXD1Q6UVY6 613 aa21.2■□□□□ 0.99
CHRNA4-203ENST00000467563 RASSF8Q8NHQ8 419 aa21.2■□□□□ 0.99
CHRNA4-203ENST00000467563 PLIN2Q99541 437 aa21.2■□□□□ 0.99
CHRNA4-203ENST00000467563 BPIFA3Q9BQP9 254 aa21.2■□□□□ 0.99
CHRNA4-203ENST00000467563 TTC12Q9H892 705 aaPredicted RBP21.2■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms