RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-231	ENST00000467435	NLRP12	P59046	1061 aa		13.93	□□□□□ -0.18
HDLBP-231	ENST00000467435	PRKG1	Q13976	671 aa		13.93	□□□□□ -0.18
HDLBP-231	ENST00000467435	POSTN	Q15063	836 aa		13.93	□□□□□ -0.18
HDLBP-231	ENST00000467435	CALCRL	Q16602	461 aa		13.93	□□□□□ -0.18
HDLBP-231	ENST00000467435	TEX2	Q8IWB9	1127 aa		13.93	□□□□□ -0.18
HDLBP-231	ENST00000467435	CEP57L1	Q8IYX8	460 aa		13.93	□□□□□ -0.18
HDLBP-231	ENST00000467435	RPAP3	Q9H6T3	665 aa	Predicted RBP	13.93	□□□□□ -0.18
HDLBP-231	ENST00000467435	EMILIN3	Q9NT22	766 aa		13.93	□□□□□ -0.18
HDLBP-231	ENST00000467435	TUBE1	Q9UJT0	475 aa		13.93	□□□□□ -0.18
HDLBP-231	ENST00000467435		A0A0G2JMZ2	1700 aa		13.93	□□□□□ -0.18
HDLBP-231	ENST00000467435	PIK3CD	O00329	1044 aa		13.92	□□□□□ -0.18
HDLBP-231	ENST00000467435	BIN1	O00499	593 aa		13.92	□□□□□ -0.18
HDLBP-231	ENST00000467435	EDIL3	O43854	480 aa		13.92	□□□□□ -0.18
HDLBP-231	ENST00000467435	GRIN3B	O60391	1043 aa		13.92	□□□□□ -0.18
HDLBP-231	ENST00000467435	FLOT1	O75955	427 aa		13.92	□□□□□ -0.18
HDLBP-231	ENST00000467435	FOS	P01100	380 aa	Predicted RBP	13.92	□□□□□ -0.18
HDLBP-231	ENST00000467435	SLFN14	P0C7P3	912 aa		13.92	□□□□□ -0.18
HDLBP-231	ENST00000467435	PRR29	P0C7W0	189 aa		13.92	□□□□□ -0.18
HDLBP-231	ENST00000467435	BACE1	P56817	501 aa		13.92	□□□□□ -0.18
HDLBP-231	ENST00000467435	PPP4R3A	Q6IN85	833 aa		13.92	□□□□□ -0.18
HDLBP-231	ENST00000467435	KRT26	Q7Z3Y9	468 aa		13.92	□□□□□ -0.18
HDLBP-231	ENST00000467435	LUZP1	Q86V48	1076 aa		13.92	□□□□□ -0.18
HDLBP-231	ENST00000467435	PRPF38A	Q8NAV1	312 aa	Known RBP	13.92	□□□□□ -0.18
HDLBP-231	ENST00000467435	RASSF8	Q8NHQ8	419 aa		13.92	□□□□□ -0.18
HDLBP-231	ENST00000467435	C12orf42	Q96LP6	360 aa		13.92	□□□□□ -0.18
HDLBP-231	ENST00000467435	AK8	Q96MA6	479 aa		13.92	□□□□□ -0.18
HDLBP-231	ENST00000467435	DDX25	Q9UHL0	483 aa	Known RBP	13.92	□□□□□ -0.18
HDLBP-231	ENST00000467435	MRPL11	Q9Y3B7	192 aa	Known RBP	13.92	□□□□□ -0.18
HDLBP-231	ENST00000467435	GLTPD2	A6NH11	291 aa		13.91	□□□□□ -0.18
HDLBP-231	ENST00000467435	PP2D1	A8MPX8	630 aa		13.91	□□□□□ -0.18
HDLBP-231	ENST00000467435	USP2	O75604	605 aa	Predicted RBP	13.91	□□□□□ -0.18
HDLBP-231	ENST00000467435	ICAM1	P05362	532 aa		13.91	□□□□□ -0.18
HDLBP-231	ENST00000467435	HOXA13	P31271	388 aa	Predicted RBP	13.91	□□□□□ -0.18
HDLBP-231	ENST00000467435	USP11	P51784	963 aa		13.91	□□□□□ -0.18
HDLBP-231	ENST00000467435	MDM2	Q00987	491 aa	Predicted RBP	13.91	□□□□□ -0.18
HDLBP-231	ENST00000467435	KARS	Q15046	597 aa	Known RBP	13.91	□□□□□ -0.18
HDLBP-231	ENST00000467435	E2F4	Q16254	413 aa		13.91	□□□□□ -0.18
HDLBP-231	ENST00000467435	TMEM266	Q2M3C6	531 aa		13.91	□□□□□ -0.18
HDLBP-231	ENST00000467435	DPCR1	Q3MIW9	517 aa		13.91	□□□□□ -0.18
HDLBP-231	ENST00000467435	DLK2	Q6UY11	383 aa		13.91	□□□□□ -0.18
HDLBP-231	ENST00000467435	LDHD	Q86WU2	507 aa		13.91	□□□□□ -0.18
HDLBP-231	ENST00000467435	GRAMD1C	Q8IYS0	662 aa		13.91	□□□□□ -0.18
HDLBP-231	ENST00000467435	IQUB	Q8NA54	791 aa		13.91	□□□□□ -0.18
HDLBP-231	ENST00000467435	SMARCE1	Q969G3	411 aa		13.91	□□□□□ -0.18
HDLBP-231	ENST00000467435	MTMR9	Q96QG7	549 aa		13.91	□□□□□ -0.18
HDLBP-231	ENST00000467435	PPP1R9B	Q96SB3	815 aa		13.91	□□□□□ -0.18
HDLBP-231	ENST00000467435	P2RX7	Q99572	595 aa	Known RBP	13.91	□□□□□ -0.18
HDLBP-231	ENST00000467435	CCSER1	Q9C0I3	900 aa		13.91	□□□□□ -0.18
HDLBP-231	ENST00000467435	NAT10	Q9H0A0	1025 aa	Known RBP	13.91	□□□□□ -0.18
HDLBP-231	ENST00000467435	DISC1	Q9NRI5	854 aa		13.91	□□□□□ -0.18
HDLBP-231	ENST00000467435	CCDC39	Q9UFE4	941 aa		13.91	□□□□□ -0.18
HDLBP-231	ENST00000467435	CCPG1	Q9ULG6	757 aa		13.91	□□□□□ -0.18
HDLBP-231	ENST00000467435	PPP1R9A	Q9ULJ8	1098 aa		13.91	□□□□□ -0.18
HDLBP-231	ENST00000467435	SNCAIP	Q9Y6H5	919 aa		13.91	□□□□□ -0.18
HDLBP-231	ENST00000467435	ZHX2	Q9Y6X8	837 aa		13.91	□□□□□ -0.18
HDLBP-231	ENST00000467435	ZNF536	O15090	1300 aa		13.9	□□□□□ -0.18
HDLBP-231	ENST00000467435	C19orf81	C9J6K1	198 aa		13.9	□□□□□ -0.18
HDLBP-231	ENST00000467435	GCOM1	H8Y6P7	765 aa	Predicted RBP	13.9	□□□□□ -0.18
HDLBP-231	ENST00000467435	CFB	P00751	764 aa		13.9	□□□□□ -0.18
HDLBP-231	ENST00000467435	POLR2M	P0CAP2	368 aa		13.9	□□□□□ -0.18
HDLBP-231	ENST00000467435	CDC25A	P30304	524 aa		13.9	□□□□□ -0.18
HDLBP-231	ENST00000467435	SREBF1	P36956	1147 aa		13.9	□□□□□ -0.18
HDLBP-231	ENST00000467435	UBA7	P41226	1012 aa		13.9	□□□□□ -0.18
HDLBP-231	ENST00000467435	STAT6	P42226	847 aa		13.9	□□□□□ -0.18
HDLBP-231	ENST00000467435	TEC	P42680	631 aa		13.9	□□□□□ -0.18
HDLBP-231	ENST00000467435	TXK	P42681	527 aa		13.9	□□□□□ -0.18
HDLBP-231	ENST00000467435	FXR2	P51116	673 aa	Known RBP eCLIP	13.9	□□□□□ -0.18	7e-26	■□□□□ 9.3
HDLBP-231	ENST00000467435	HMGCS2	P54868	508 aa		13.9	□□□□□ -0.18
HDLBP-231	ENST00000467435	ARHGAP4	P98171	946 aa		13.9	□□□□□ -0.18
HDLBP-231	ENST00000467435	VGLL4	Q14135	290 aa		13.9	□□□□□ -0.18
HDLBP-231	ENST00000467435	PDXDC2P	Q6P474	469 aa		13.9	□□□□□ -0.18
HDLBP-231	ENST00000467435	MOXD1	Q6UVY6	613 aa		13.9	□□□□□ -0.18
HDLBP-231	ENST00000467435	SH3RF1	Q7Z6J0	888 aa		13.9	□□□□□ -0.18
HDLBP-231	ENST00000467435	CABP7	Q86V35	215 aa		13.9	□□□□□ -0.18
HDLBP-231	ENST00000467435	ZC3H15	Q8WU90	426 aa	Known RBP	13.9	□□□□□ -0.18
HDLBP-231	ENST00000467435	CDCA5	Q96FF9	252 aa		13.9	□□□□□ -0.18
HDLBP-231	ENST00000467435	PAGE5	Q96GU1	130 aa		13.9	□□□□□ -0.18
HDLBP-231	ENST00000467435	SLC38A10	Q9HBR0	1119 aa		13.9	□□□□□ -0.18
HDLBP-231	ENST00000467435	PCDHA5	Q9Y5H7	936 aa		13.9	□□□□□ -0.18
HDLBP-231	ENST00000467435	IQCA1L	A6NCM1	817 aa		13.89	□□□□□ -0.19
HDLBP-231	ENST00000467435	PPP1R12B	O60237	982 aa	Predicted RBP	13.89	□□□□□ -0.19
HDLBP-231	ENST00000467435	SMC2	O95347	1197 aa		13.89	□□□□□ -0.19
HDLBP-231	ENST00000467435	NF2	P35240	595 aa		13.89	□□□□□ -0.19
HDLBP-231	ENST00000467435	AFM	P43652	599 aa		13.89	□□□□□ -0.19
HDLBP-231	ENST00000467435	IREB2	P48200	963 aa	Known RBP	13.89	□□□□□ -0.19
HDLBP-231	ENST00000467435	MAP3K9	P80192	1104 aa		13.89	□□□□□ -0.19
HDLBP-231	ENST00000467435	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	13.89	□□□□□ -0.19
HDLBP-231	ENST00000467435	FCHSD1	Q86WN1	690 aa		13.89	□□□□□ -0.19
HDLBP-231	ENST00000467435	IGSF22	Q8N9C0	903 aa		13.89	□□□□□ -0.19
HDLBP-231	ENST00000467435	CRYGN	Q8WXF5	182 aa		13.89	□□□□□ -0.19
HDLBP-231	ENST00000467435	AGBL1	Q96MI9	1066 aa		13.89	□□□□□ -0.19
HDLBP-231	ENST00000467435	MBOAT7	Q96N66	472 aa		13.89	□□□□□ -0.19
HDLBP-231	ENST00000467435	RAB34	Q9BZG1	259 aa		13.89	□□□□□ -0.19
HDLBP-231	ENST00000467435	EHMT1	Q9H9B1	1298 aa		13.89	□□□□□ -0.19
HDLBP-231	ENST00000467435	TMOD4	Q9NZQ9	345 aa		13.89	□□□□□ -0.19
HDLBP-231	ENST00000467435	MAN1B1	Q9UKM7	699 aa		13.89	□□□□□ -0.19
HDLBP-231	ENST00000467435	AFG3L2	Q9Y4W6	797 aa		13.89	□□□□□ -0.19
HDLBP-231	ENST00000467435	CTDP1	Q9Y5B0	961 aa	Predicted RBP	13.89	□□□□□ -0.19
HDLBP-231	ENST00000467435	CSAD	Q9Y600	493 aa		13.89	□□□□□ -0.19
HDLBP-231	ENST00000467435	CYP3A7-CYP3A51P	A0A087WV96	503 aa		13.88	□□□□□ -0.19

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