RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 ANAPC16Q96DE5 110 aa6.81□□□□□ -1.32
SMC4-207ENST00000467263 SPATA25Q9BR10 227 aa6.81□□□□□ -1.32
SMC4-207ENST00000467263 SUSD2Q9UGT4 822 aa6.81□□□□□ -1.32
SMC4-207ENST00000467263 MRVI1Q9Y6F6 885 aa6.81□□□□□ -1.32
SMC4-207ENST00000467263 SRGAP3O43295 1099 aa6.8□□□□□ -1.32
SMC4-207ENST00000467263 CYBBP04839 570 aa6.8□□□□□ -1.32
SMC4-207ENST00000467263 DNAJA1P31689 397 aaKnown RBP6.8□□□□□ -1.32
SMC4-207ENST00000467263 KCNC1P48547 511 aa6.8□□□□□ -1.32
SMC4-207ENST00000467263 DLX2Q07687 328 aaPredicted RBP6.8□□□□□ -1.32
SMC4-207ENST00000467263 EFEMP1Q12805 493 aa6.8□□□□□ -1.32
SMC4-207ENST00000467263 PPP2R5EQ16537 467 aa6.8□□□□□ -1.32
SMC4-207ENST00000467263 CWF19L1Q69YN2 538 aaKnown RBP6.8□□□□□ -1.32
SMC4-207ENST00000467263 FAM169BQ8N8A8 192 aa6.8□□□□□ -1.32
SMC4-207ENST00000467263 MCMBPQ9BTE3 642 aa6.8□□□□□ -1.32
SMC4-207ENST00000467263 PDLIM7Q9NR12 457 aa6.8□□□□□ -1.32
SMC4-207ENST00000467263 LTBP3Q9NS15 1303 aa6.79□□□□□ -1.32
SMC4-207ENST00000467263 F8W031 263 aaPredicted RBP6.79□□□□□ -1.32
SMC4-207ENST00000467263 ADRB1P08588 477 aa6.79□□□□□ -1.32
SMC4-207ENST00000467263 PFKLP17858 780 aa6.79□□□□□ -1.32
SMC4-207ENST00000467263 CD247P20963 164 aa6.79□□□□□ -1.32
SMC4-207ENST00000467263 PLP2Q04941 152 aa6.79□□□□□ -1.32
SMC4-207ENST00000467263 ANKRD39Q53RE8 183 aa6.79□□□□□ -1.32
SMC4-207ENST00000467263 NOL9Q5SY16 702 aaKnown RBP6.79□□□□□ -1.32
SMC4-207ENST00000467263 LIPIQ6XZB0 460 aa6.79□□□□□ -1.32
SMC4-207ENST00000467263 FERMT3Q86UX7 667 aa6.79□□□□□ -1.32
SMC4-207ENST00000467263 PTCHD1Q96NR3 888 aa6.79□□□□□ -1.32
SMC4-207ENST00000467263 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.79□□□□□ -1.32
SMC4-207ENST00000467263 NOL6Q9H6R4 1146 aaKnown RBP6.79□□□□□ -1.32
SMC4-207ENST00000467263 PCDHB10Q9UN67 800 aa6.79□□□□□ -1.32
SMC4-207ENST00000467263 A0A1W2PQH9 124 aa6.78□□□□□ -1.32
SMC4-207ENST00000467263 CBFA2T2O43439 604 aa6.78□□□□□ -1.32
SMC4-207ENST00000467263 SSBP05455 408 aaKnown RBP eCLIP6.78□□□□□ -1.32
SMC4-207ENST00000467263 CD3EP07766 207 aa6.78□□□□□ -1.32
SMC4-207ENST00000467263 HTRA3P83110 453 aa6.78□□□□□ -1.32
SMC4-207ENST00000467263 ARID5AQ03989 594 aa6.78□□□□□ -1.32
SMC4-207ENST00000467263 OR6P1Q8NGX9 317 aa6.78□□□□□ -1.32
SMC4-207ENST00000467263 ZDHHC15Q96MV8 337 aa6.78□□□□□ -1.32
SMC4-207ENST00000467263 STRIP2Q9ULQ0 834 aa6.78□□□□□ -1.32
SMC4-207ENST00000467263 FHOD1Q9Y613 1164 aa6.78□□□□□ -1.32
SMC4-207ENST00000467263 DUSP10Q9Y6W6 482 aa6.78□□□□□ -1.32
SMC4-207ENST00000467263 PMF1-BGLAPU3KQ54 211 aa6.78□□□□□ -1.32
SMC4-207ENST00000467263 PPP1R11O60927 126 aaPredicted RBP6.77□□□□□ -1.33
SMC4-207ENST00000467263 ASGR2P07307 311 aa6.77□□□□□ -1.33
SMC4-207ENST00000467263 CAP1Q01518 475 aa6.77□□□□□ -1.33
SMC4-207ENST00000467263 TARBP2Q15633 366 aaKnown RBP6.77□□□□□ -1.33
SMC4-207ENST00000467263 NT5DC1Q5TFE4 455 aa6.77□□□□□ -1.33
SMC4-207ENST00000467263 SAPCD2Q86UD0 394 aa6.77□□□□□ -1.33
SMC4-207ENST00000467263 NOX5Q96PH1 765 aa6.77□□□□□ -1.33
SMC4-207ENST00000467263 ZNF214Q9UL59 606 aaPredicted RBP6.77□□□□□ -1.33
SMC4-207ENST00000467263 GLI4P10075 376 aa6.76□□□□□ -1.33
SMC4-207ENST00000467263 PPP2R5DQ14738 602 aa6.76□□□□□ -1.33
SMC4-207ENST00000467263 CYP2R1Q6VVX0 501 aa6.76□□□□□ -1.33
SMC4-207ENST00000467263 MCF2L2Q86YR7 1114 aa6.76□□□□□ -1.33
SMC4-207ENST00000467263 SLC12A7Q9Y666 1083 aa6.76□□□□□ -1.33
SMC4-207ENST00000467263 A0A1W2PQJ5 194 aa6.75□□□□□ -1.33
SMC4-207ENST00000467263 SMAD7O15105 426 aaKnown RBP6.75□□□□□ -1.33
SMC4-207ENST00000467263 FGRP09769 529 aa6.75□□□□□ -1.33
SMC4-207ENST00000467263 PMLP29590 882 aa6.75□□□□□ -1.33
SMC4-207ENST00000467263 ETFBP38117 255 aa6.75□□□□□ -1.33
SMC4-207ENST00000467263 GNPTABQ3T906 1256 aa6.75□□□□□ -1.33
SMC4-207ENST00000467263 NAALADL2Q58DX5 795 aa6.75□□□□□ -1.33
SMC4-207ENST00000467263 HHIPL2Q6UWX4 724 aa6.75□□□□□ -1.33
SMC4-207ENST00000467263 NLGN1Q8N2Q7 840 aa6.75□□□□□ -1.33
SMC4-207ENST00000467263 C19orf47Q8N9M1 422 aaKnown RBP6.75□□□□□ -1.33
SMC4-207ENST00000467263 ADCY4Q8NFM4 1077 aa6.75□□□□□ -1.33
SMC4-207ENST00000467263 SYT3Q9BQG1 590 aa6.75□□□□□ -1.33
SMC4-207ENST00000467263 VAMP4O75379 141 aa6.74□□□□□ -1.33
SMC4-207ENST00000467263 INSRRP14616 1297 aa6.74□□□□□ -1.33
SMC4-207ENST00000467263 L1CAMP32004 1257 aa6.74□□□□□ -1.33
SMC4-207ENST00000467263 CASP7P55210 303 aa6.74□□□□□ -1.33
SMC4-207ENST00000467263 ZC3H6P61129 1189 aaKnown RBP6.74□□□□□ -1.33
SMC4-207ENST00000467263 ZFYVE27Q5T4F4 411 aa6.74□□□□□ -1.33
SMC4-207ENST00000467263 SLC43A3Q8NBI5 491 aa6.74□□□□□ -1.33
SMC4-207ENST00000467263 NLGN2Q8NFZ4 835 aa6.74□□□□□ -1.33
SMC4-207ENST00000467263 DDX1Q92499 740 aaKnown RBP6.74□□□□□ -1.33
SMC4-207ENST00000467263 SMARCC1Q92922 1105 aaPredicted RBP6.74□□□□□ -1.33
SMC4-207ENST00000467263 PHAXQ9H814 394 aaKnown RBP6.74□□□□□ -1.33
SMC4-207ENST00000467263 ZNF408Q9H9D4 720 aa6.74□□□□□ -1.33
SMC4-207ENST00000467263 RWDD3Q9Y3V2 267 aa6.74□□□□□ -1.33
SMC4-207ENST00000467263 SH3D21A4FU49 640 aa6.73□□□□□ -1.33
SMC4-207ENST00000467263 ITGA4P13612 1032 aa6.73□□□□□ -1.33
SMC4-207ENST00000467263 NOP2P46087 812 aaKnown RBP6.73□□□□□ -1.33
SMC4-207ENST00000467263 SLC7A5Q01650 507 aa6.73□□□□□ -1.33
SMC4-207ENST00000467263 SPATS1Q496A3 300 aa6.73□□□□□ -1.33
SMC4-207ENST00000467263 UBXN11Q5T124 520 aa6.73□□□□□ -1.33
SMC4-207ENST00000467263 ERICH6BQ5W0A0 696 aa6.73□□□□□ -1.33
SMC4-207ENST00000467263 ALG3Q92685 438 aa6.73□□□□□ -1.33
SMC4-207ENST00000467263 DBR1Q9UK59 544 aaKnown RBP6.73□□□□□ -1.33
SMC4-207ENST00000467263 FAN1Q9Y2M0 1017 aa6.73□□□□□ -1.33
SMC4-207ENST00000467263 STXBP3O00186 592 aa6.72□□□□□ -1.33
SMC4-207ENST00000467263 NOBOXO60393 691 aa6.72□□□□□ -1.33
SMC4-207ENST00000467263 NCAM1P13591 858 aa6.72□□□□□ -1.33
SMC4-207ENST00000467263 CORO7P57737 925 aa6.72□□□□□ -1.33
SMC4-207ENST00000467263 DPY19L1Q2PZI1 675 aa6.72□□□□□ -1.33
SMC4-207ENST00000467263 KIAA1211LQ6NV74 962 aa6.72□□□□□ -1.33
SMC4-207ENST00000467263 VHLLQ6RSH7 139 aa6.72□□□□□ -1.33
SMC4-207ENST00000467263 B3GNT8Q7Z7M8 397 aa6.72□□□□□ -1.33
SMC4-207ENST00000467263 KLHL6Q8WZ60 621 aa6.72□□□□□ -1.33
SMC4-207ENST00000467263 GMLQ99445 158 aa6.72□□□□□ -1.33
SMC4-207ENST00000467263 HAUS7Q99871 368 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms