RNA–Protein interactions for RNA: ENST00000466963.1

CXXC4-202, Transcript of CXXC finger protein 4, humanhuman

TSL 1 (best)

Gene CXXC4, Length 3,130 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-202ENST00000466963 MKRN4PQ13434 485 aaPredicted RBP6.78□□□□□ -1.32
CXXC4-202ENST00000466963 FBXL18Q96ME1 805 aa6.78□□□□□ -1.32
CXXC4-202ENST00000466963 CRBNQ96SW2 442 aa6.78□□□□□ -1.32
CXXC4-202ENST00000466963 SAP30BPQ9UHR5 308 aaKnown RBP6.78□□□□□ -1.32
CXXC4-202ENST00000466963 LPXNO60711 386 aa6.77□□□□□ -1.33
CXXC4-202ENST00000466963 ECM2O94769 699 aaPredicted RBP6.77□□□□□ -1.33
CXXC4-202ENST00000466963 CA3P07451 260 aa6.77□□□□□ -1.33
CXXC4-202ENST00000466963 TGFB3P10600 412 aa6.77□□□□□ -1.33
CXXC4-202ENST00000466963 WDR5P61964 334 aaKnown RBP6.77□□□□□ -1.33
CXXC4-202ENST00000466963 SIGLEC14Q08ET2 396 aa6.77□□□□□ -1.33
CXXC4-202ENST00000466963 CTC1Q2NKJ3 1217 aa6.77□□□□□ -1.33
CXXC4-202ENST00000466963 FAM26DQ5JW98 314 aa6.77□□□□□ -1.33
CXXC4-202ENST00000466963 TAPT1Q6NXT6 567 aa6.77□□□□□ -1.33
CXXC4-202ENST00000466963 RASGRP2Q7LDG7 609 aa6.77□□□□□ -1.33
CXXC4-202ENST00000466963 SEPT8Q92599 483 aa6.77□□□□□ -1.33
CXXC4-202ENST00000466963 NECTIN4Q96NY8 510 aa6.77□□□□□ -1.33
CXXC4-202ENST00000466963 RHOBTB2Q9BYZ6 727 aa6.77□□□□□ -1.33
CXXC4-202ENST00000466963 NOB1Q9ULX3 412 aaKnown RBP6.77□□□□□ -1.33
CXXC4-202ENST00000466963 F5H6K3 240 aa6.77□□□□□ -1.33
CXXC4-202ENST00000466963 LGR5O75473 907 aa6.77□□□□□ -1.33
CXXC4-202ENST00000466963 GH1P01241 217 aa6.77□□□□□ -1.33
CXXC4-202ENST00000466963 KLRC3Q07444 240 aa6.77□□□□□ -1.33
CXXC4-202ENST00000466963 LAMC2Q13753 1193 aa6.77□□□□□ -1.33
CXXC4-202ENST00000466963 PPP2R5BQ15173 497 aa6.77□□□□□ -1.33
CXXC4-202ENST00000466963 ZKSCAN2Q63HK3 967 aa6.77□□□□□ -1.33
CXXC4-202ENST00000466963 XRRA1Q6P2D8 792 aa6.77□□□□□ -1.33
CXXC4-202ENST00000466963 LRRC8DQ7L1W4 858 aa6.77□□□□□ -1.33
CXXC4-202ENST00000466963 SIAH1Q8IUQ4 282 aa6.77□□□□□ -1.33
CXXC4-202ENST00000466963 ZNF444Q8N0Y2 327 aaPredicted RBP6.77□□□□□ -1.33
CXXC4-202ENST00000466963 SNRKQ9NRH2 765 aa6.77□□□□□ -1.33
CXXC4-202ENST00000466963 PA2G4Q9UQ80 394 aaKnown RBP6.77□□□□□ -1.33
CXXC4-202ENST00000466963 COG6Q9Y2V7 657 aa6.77□□□□□ -1.33
CXXC4-202ENST00000466963 KMT2EQ8IZD2 1858 aa6.77□□□□□ -1.33
CXXC4-202ENST00000466963 SSTR3P32745 418 aaPredicted RBP6.76□□□□□ -1.33
CXXC4-202ENST00000466963 MAGEA9P43362 315 aa6.76□□□□□ -1.33
CXXC4-202ENST00000466963 RARSP54136 660 aaKnown RBP6.76□□□□□ -1.33
CXXC4-202ENST00000466963 PRAMEF19Q5SWL8 479 aa6.76□□□□□ -1.33
CXXC4-202ENST00000466963 FGD4Q96M96 766 aa6.76□□□□□ -1.33
CXXC4-202ENST00000466963 TTC14Q96N46 770 aa6.76□□□□□ -1.33
CXXC4-202ENST00000466963 MEIS3Q99687 375 aa6.76□□□□□ -1.33
CXXC4-202ENST00000466963 ZBED2Q9BTP6 218 aa6.76□□□□□ -1.33
CXXC4-202ENST00000466963 PPP1R12CQ9BZL4 782 aa6.76□□□□□ -1.33
CXXC4-202ENST00000466963 NOD1Q9Y239 953 aa6.76□□□□□ -1.33
CXXC4-202ENST00000466963 NR2E1Q9Y466 385 aa6.76□□□□□ -1.33
CXXC4-202ENST00000466963 MYH4Q9Y623 1939 aa6.76□□□□□ -1.33
CXXC4-202ENST00000466963 LOC730098B7Z3J9 87 aa6.76□□□□□ -1.33
CXXC4-202ENST00000466963 HOXB8P17481 243 aaPredicted RBP6.76□□□□□ -1.33
CXXC4-202ENST00000466963 SLC9C2Q5TAH2 1124 aa6.76□□□□□ -1.33
CXXC4-202ENST00000466963 TMEM184AQ6ZMB5 413 aa6.76□□□□□ -1.33
CXXC4-202ENST00000466963 TBC1D9Q6ZT07 1266 aa6.76□□□□□ -1.33
CXXC4-202ENST00000466963 TRIM67Q6ZTA4 783 aa6.76□□□□□ -1.33
CXXC4-202ENST00000466963 CCDC144CPQ8IYA2 1237 aa6.76□□□□□ -1.33
CXXC4-202ENST00000466963 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.76□□□□□ -1.33
CXXC4-202ENST00000466963 HAUS7Q99871 368 aa6.76□□□□□ -1.33
CXXC4-202ENST00000466963 DBNDD2Q9BQY9 259 aa6.76□□□□□ -1.33
CXXC4-202ENST00000466963 RANBP17Q9H2T7 1088 aaKnown RBP6.76□□□□□ -1.33
CXXC4-202ENST00000466963 RNF146Q9NTX7 359 aa6.76□□□□□ -1.33
CXXC4-202ENST00000466963 CD207Q9UJ71 328 aa6.76□□□□□ -1.33
CXXC4-202ENST00000466963 LZTS1Q9Y250 596 aa6.76□□□□□ -1.33
CXXC4-202ENST00000466963 ABCB11O95342 1321 aa6.76□□□□□ -1.33
CXXC4-202ENST00000466963 GALR2O43603 387 aaPredicted RBP6.76□□□□□ -1.33
CXXC4-202ENST00000466963 IRS1P35568 1242 aa6.76□□□□□ -1.33
CXXC4-202ENST00000466963 PLCD1P51178 756 aa6.76□□□□□ -1.33
CXXC4-202ENST00000466963 GIMAP8Q8ND71 665 aaPredicted RBP6.76□□□□□ -1.33
CXXC4-202ENST00000466963 OR6J1Q8NGC5 347 aa6.76□□□□□ -1.33
CXXC4-202ENST00000466963 FTHL17Q9BXU8 183 aa6.76□□□□□ -1.33
CXXC4-202ENST00000466963 FTOQ9C0B1 505 aaKnown RBP eCLIP6.76□□□□□ -1.33
CXXC4-202ENST00000466963 MTMR4Q9NYA4 1195 aa6.76□□□□□ -1.33
CXXC4-202ENST00000466963 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.76□□□□□ -1.33
CXXC4-202ENST00000466963 DBNLQ9UJU6 430 aaKnown RBP6.76□□□□□ -1.33
CXXC4-202ENST00000466963 TMEM221A6NGB7 291 aa6.75□□□□□ -1.33
CXXC4-202ENST00000466963 M0R296 226 aa6.75□□□□□ -1.33
CXXC4-202ENST00000466963 SURF6O75683 361 aaKnown RBP6.75□□□□□ -1.33
CXXC4-202ENST00000466963 NDUFB10O96000 172 aa6.75□□□□□ -1.33
CXXC4-202ENST00000466963 MMP1P03956 469 aa6.75□□□□□ -1.33
CXXC4-202ENST00000466963 AKR1B1P15121 316 aa6.75□□□□□ -1.33
CXXC4-202ENST00000466963 DYNLL1P63167 89 aaKnown RBP6.75□□□□□ -1.33
CXXC4-202ENST00000466963 ZXDAP98168 799 aa6.75□□□□□ -1.33
CXXC4-202ENST00000466963 ZYXQ15942 572 aaKnown RBP6.75□□□□□ -1.33
CXXC4-202ENST00000466963 DGKDQ16760 1214 aa6.75□□□□□ -1.33
CXXC4-202ENST00000466963 FAM83BQ5T0W9 1011 aa6.75□□□□□ -1.33
CXXC4-202ENST00000466963 ADGRA1Q86SQ6 560 aa6.75□□□□□ -1.33
CXXC4-202ENST00000466963 CMTR2Q8IYT2 770 aaKnown RBP6.75□□□□□ -1.33
CXXC4-202ENST00000466963 BANK1Q8NDB2 785 aa6.75□□□□□ -1.33
CXXC4-202ENST00000466963 MKNK2Q9HBH9 465 aa6.75□□□□□ -1.33
CXXC4-202ENST00000466963 AAASQ9NRG9 546 aa6.75□□□□□ -1.33
CXXC4-202ENST00000466963 CYP39A1Q9NYL5 469 aa6.75□□□□□ -1.33
CXXC4-202ENST00000466963 CUL9Q8IWT3 2517 aa6.75□□□□□ -1.33
CXXC4-202ENST00000466963 LINC01553A4QN01 128 aa6.75□□□□□ -1.33
CXXC4-202ENST00000466963 HAS3O00219 553 aa6.75□□□□□ -1.33
CXXC4-202ENST00000466963 SMPD1P17405 629 aa6.75□□□□□ -1.33
CXXC4-202ENST00000466963 ICAM3P32942 547 aa6.75□□□□□ -1.33
CXXC4-202ENST00000466963 ALDH5A1P51649 535 aaPredicted RBP6.75□□□□□ -1.33
CXXC4-202ENST00000466963 KCNQ1P51787 676 aa6.75□□□□□ -1.33
CXXC4-202ENST00000466963 CLCN5P51795 746 aa6.75□□□□□ -1.33
CXXC4-202ENST00000466963 BMS1Q14692 1282 aaKnown RBP6.75□□□□□ -1.33
CXXC4-202ENST00000466963 GPATCH4Q5T3I0 446 aaKnown RBP6.75□□□□□ -1.33
CXXC4-202ENST00000466963 EFHBQ8N7U6 833 aa6.75□□□□□ -1.33
CXXC4-202ENST00000466963 RASGRP4Q8TDF6 673 aa6.75□□□□□ -1.33
CXXC4-202ENST00000466963 LRRCC1Q9C099 1032 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms