RNA–Protein interactions for RNA: ENST00000466763.5

UBA3-209, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-209ENST00000466763 ZNF333Q96JL9 665 aa16.05■□□□□ 0.16
UBA3-209ENST00000466763 TBC1D32Q96NH3 1257 aa16.05■□□□□ 0.16
UBA3-209ENST00000466763 KIF2CQ99661 725 aa16.05■□□□□ 0.16
UBA3-209ENST00000466763 ZNF236Q9UL36 1845 aa16.04■□□□□ 0.16
UBA3-209ENST00000466763 DNAJC25-GNG10A0A024R161 153 aa16.04■□□□□ 0.16
UBA3-209ENST00000466763 CNGA1P29973 690 aa16.04■□□□□ 0.16
UBA3-209ENST00000466763 RPS6P62753 249 aaKnown RBP16.04■□□□□ 0.16
UBA3-209ENST00000466763 RABEP1Q15276 862 aa16.04■□□□□ 0.16
UBA3-209ENST00000466763 MTFR1Q15390 333 aa16.04■□□□□ 0.16
UBA3-209ENST00000466763 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.04■□□□□ 0.16
UBA3-209ENST00000466763 GPKOWQ92917 476 aaPredicted RBP eCLIP16.04■□□□□ 0.16
UBA3-209ENST00000466763 PHKBQ93100 1093 aa16.04■□□□□ 0.16
UBA3-209ENST00000466763 PURBQ96QR8 312 aaKnown RBP16.04■□□□□ 0.16
UBA3-209ENST00000466763 TMEM106CQ9BVX2 250 aa16.04■□□□□ 0.16
UBA3-209ENST00000466763 SLC26A6Q9BXS9 759 aa16.04■□□□□ 0.16
UBA3-209ENST00000466763 RNF208Q9H0X6 261 aa16.04■□□□□ 0.16
UBA3-209ENST00000466763 DIS3Q9Y2L1 958 aaKnown RBP16.04■□□□□ 0.16
UBA3-209ENST00000466763 CCL5P13501 91 aa16.03■□□□□ 0.16
UBA3-209ENST00000466763 CACNB2Q08289 660 aaPredicted RBP16.03■□□□□ 0.16
UBA3-209ENST00000466763 OLFML2BQ68BL8 750 aa16.03■□□□□ 0.16
UBA3-209ENST00000466763 FAM133AQ8N9E0 248 aa16.03■□□□□ 0.16
UBA3-209ENST00000466763 TINF2Q9BSI4 451 aa16.03■□□□□ 0.16
UBA3-209ENST00000466763 UNC93B1Q9H1C4 597 aa16.03■□□□□ 0.16
UBA3-209ENST00000466763 HMX1Q9NP08 348 aaPredicted RBP16.03■□□□□ 0.16
UBA3-209ENST00000466763 SOWAHBA6NEL2 793 aa16.02■□□□□ 0.16
UBA3-209ENST00000466763 SSRP1Q08945 709 aaKnown RBP16.02■□□□□ 0.16
UBA3-209ENST00000466763 FUT2Q10981 343 aa16.02■□□□□ 0.16
UBA3-209ENST00000466763 SCRN1Q12765 414 aa16.02■□□□□ 0.16
UBA3-209ENST00000466763 PRAMEF19Q5SWL8 479 aa16.02■□□□□ 0.16
UBA3-209ENST00000466763 TRIM22Q8IYM9 498 aa16.02■□□□□ 0.16
UBA3-209ENST00000466763 NECAB1Q8N987 351 aa16.02■□□□□ 0.16
UBA3-209ENST00000466763 RGS22Q8NE09 1264 aa16.02■□□□□ 0.16
UBA3-209ENST00000466763 ADD3Q9UEY8 706 aaKnown RBP16.02■□□□□ 0.16
UBA3-209ENST00000466763 NID2Q14112 1375 aa16.01■□□□□ 0.15
UBA3-209ENST00000466763 MCM3APO60318 1980 aa16.01■□□□□ 0.15
UBA3-209ENST00000466763 GCOM1H8Y6P7 765 aaPredicted RBP16.01■□□□□ 0.15
UBA3-209ENST00000466763 PRPF3O43395 683 aaKnown RBP16.01■□□□□ 0.15
UBA3-209ENST00000466763 ST18O60284 1047 aa16.01■□□□□ 0.15
UBA3-209ENST00000466763 PFKFB2O60825 505 aa16.01■□□□□ 0.15
UBA3-209ENST00000466763 LARGE1O95461 756 aa16.01■□□□□ 0.15
UBA3-209ENST00000466763 POLR2MP0CAP2 368 aa16.01■□□□□ 0.15
UBA3-209ENST00000466763 IFNAR1P17181 557 aa16.01■□□□□ 0.15
UBA3-209ENST00000466763 CCND3P30281 292 aaPredicted RBP16.01■□□□□ 0.15
UBA3-209ENST00000466763 HOXA13P31271 388 aaPredicted RBP16.01■□□□□ 0.15
UBA3-209ENST00000466763 NAPAP54920 295 aa16.01■□□□□ 0.15
UBA3-209ENST00000466763 SOX10P56693 466 aa16.01■□□□□ 0.15
UBA3-209ENST00000466763 FCHSD1Q86WN1 690 aa16.01■□□□□ 0.15
UBA3-209ENST00000466763 SYTL5Q8TDW5 730 aaPredicted RBP16.01■□□□□ 0.15
UBA3-209ENST00000466763 CUL5Q93034 780 aa16.01■□□□□ 0.15
UBA3-209ENST00000466763 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.01■□□□□ 0.15
UBA3-209ENST00000466763 LIMCH1Q9UPQ0 1083 aa16.01■□□□□ 0.15
UBA3-209ENST00000466763 CNPY2Q9Y2B0 182 aa16.01■□□□□ 0.15
UBA3-209ENST00000466763 KIAA0100Q14667 2235 aaKnown RBP16■□□□□ 0.15
UBA3-209ENST00000466763 RPTORQ8N122 1335 aa16■□□□□ 0.15
UBA3-209ENST00000466763 ASB14A6NK59 587 aa16■□□□□ 0.15
UBA3-209ENST00000466763 OPLAHO14841 1288 aa16■□□□□ 0.15
UBA3-209ENST00000466763 DTNBO60941 627 aa16■□□□□ 0.15
UBA3-209ENST00000466763 CDKL5O76039 1030 aa16■□□□□ 0.15
UBA3-209ENST00000466763 SCG2P13521 617 aa16■□□□□ 0.15
UBA3-209ENST00000466763 ALDH5A1P51649 535 aaPredicted RBP16■□□□□ 0.15
UBA3-209ENST00000466763 NTRK3Q16288 839 aa16■□□□□ 0.15
UBA3-209ENST00000466763 ME3Q16798 604 aa16■□□□□ 0.15
UBA3-209ENST00000466763 WWC2Q6AWC2 1192 aa16■□□□□ 0.15
UBA3-209ENST00000466763 ARMCX2Q7L311 632 aa16■□□□□ 0.15
UBA3-209ENST00000466763 ZNF467Q7Z7K2 595 aaPredicted RBP16■□□□□ 0.15
UBA3-209ENST00000466763 SMARCC2Q8TAQ2 1214 aa16■□□□□ 0.15
UBA3-209ENST00000466763 FGD4Q96M96 766 aa16■□□□□ 0.15
UBA3-209ENST00000466763 TAAR1Q96RJ0 339 aa16■□□□□ 0.15
UBA3-209ENST00000466763 MPHOSPH6Q99547 160 aaKnown RBP16■□□□□ 0.15
UBA3-209ENST00000466763 RNF26Q9BY78 433 aaPredicted RBP16■□□□□ 0.15
UBA3-209ENST00000466763 CDKN2AIPQ9NXV6 580 aaPredicted RBP16■□□□□ 0.15
UBA3-209ENST00000466763 RBM27Q9P2N5 1060 aaKnown RBP16■□□□□ 0.15
UBA3-209ENST00000466763 ZHX1Q9UKY1 873 aaPredicted RBP16■□□□□ 0.15
UBA3-209ENST00000466763 DDX49Q9Y6V7 483 aaKnown RBP16■□□□□ 0.15
UBA3-209ENST00000466763 MKRN4PQ13434 485 aaPredicted RBP15.99■□□□□ 0.15
UBA3-209ENST00000466763 PFKFB3Q16875 520 aaPredicted RBP15.99■□□□□ 0.15
UBA3-209ENST00000466763 ARHGEF16Q5VV41 709 aa15.99■□□□□ 0.15
UBA3-209ENST00000466763 EEPD1Q7L9B9 569 aa15.99■□□□□ 0.15
UBA3-209ENST00000466763 MSL3Q8N5Y2 521 aaKnown RBP15.99■□□□□ 0.15
UBA3-209ENST00000466763 DEFB118Q96PH6 123 aa15.99■□□□□ 0.15
UBA3-209ENST00000466763 RMDN3Q96TC7 470 aa15.99■□□□□ 0.15
UBA3-209ENST00000466763 PSTPIP2Q9H939 334 aa15.99■□□□□ 0.15
UBA3-209ENST00000466763 SYNGAP1Q96PV0 1343 aa15.98■□□□□ 0.15
UBA3-209ENST00000466763 RBBP6Q7Z6E9 1792 aaKnown RBP15.98■□□□□ 0.15
UBA3-209ENST00000466763 B4DLN1 442 aa15.98■□□□□ 0.15
UBA3-209ENST00000466763 SNAI1O95863 264 aaPredicted RBP15.98■□□□□ 0.15
UBA3-209ENST00000466763 EIF2AK2P19525 551 aaKnown RBP15.98■□□□□ 0.15
UBA3-209ENST00000466763 HSD17B4P51659 736 aa15.98■□□□□ 0.15
UBA3-209ENST00000466763 MRPL12P52815 198 aaKnown RBP15.98■□□□□ 0.15
UBA3-209ENST00000466763 PDE4DQ08499 809 aa15.98■□□□□ 0.15
UBA3-209ENST00000466763 MAP3K21Q5TCX8 1036 aa15.98■□□□□ 0.15
UBA3-209ENST00000466763 ANO1Q5XXA6 986 aa15.98■□□□□ 0.15
UBA3-209ENST00000466763 USP17L6PQ6QN14 398 aa15.98■□□□□ 0.15
UBA3-209ENST00000466763 MAMDC4Q6UXC1 1216 aa15.98■□□□□ 0.15
UBA3-209ENST00000466763 TRPV1Q8NER1 839 aa15.98■□□□□ 0.15
UBA3-209ENST00000466763 DNERQ8NFT8 737 aa15.98■□□□□ 0.15
UBA3-209ENST00000466763 GTF3C6Q969F1 213 aa15.98■□□□□ 0.15
UBA3-209ENST00000466763 ZSCAN31Q96LW9 406 aaPredicted RBP15.98■□□□□ 0.15
UBA3-209ENST00000466763 MAF1Q9H063 256 aa15.98■□□□□ 0.15
UBA3-209ENST00000466763 BARHL2Q9NY43 387 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms