RNA–Protein interactions for RNA: ENST00000466454.1

CLCA3P-202, Transcript of chloride channel accessory 3, pseudogene, humanhuman

TSL 1 (best) BASIC

Gene CLCA3P, Length 3,412 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3P-202ENST00000466454 SLC13A1Q9BZW2 595 aa5.03□□□□□ -1.6
CLCA3P-202ENST00000466454 LRRCC1Q9C099 1032 aa5.03□□□□□ -1.6
CLCA3P-202ENST00000466454 KLHL11Q9NVR0 708 aa5.03□□□□□ -1.6
CLCA3P-202ENST00000466454 GTF3C4Q9UKN8 822 aa5.03□□□□□ -1.6
CLCA3P-202ENST00000466454 SPEF2Q9C093 1822 aa5.03□□□□□ -1.6
CLCA3P-202ENST00000466454 RAD50Q92878 1312 aa5.03□□□□□ -1.6
CLCA3P-202ENST00000466454 WDR33Q9C0J8 1336 aaKnown RBP5.03□□□□□ -1.6
CLCA3P-202ENST00000466454 LOC102724428A0A0B4J2F2 783 aa5.03□□□□□ -1.6
CLCA3P-202ENST00000466454 FAM221AA4D161 298 aa5.03□□□□□ -1.6
CLCA3P-202ENST00000466454 ZBBXA8MT70 800 aa5.03□□□□□ -1.6
CLCA3P-202ENST00000466454 AKR1B10O60218 316 aa5.03□□□□□ -1.6
CLCA3P-202ENST00000466454 PLOD3O60568 738 aa5.03□□□□□ -1.6
CLCA3P-202ENST00000466454 SLC4A1P02730 911 aa5.03□□□□□ -1.6
CLCA3P-202ENST00000466454 KIF5BP33176 963 aa5.03□□□□□ -1.6
CLCA3P-202ENST00000466454 SIK1P57059 783 aa5.03□□□□□ -1.6
CLCA3P-202ENST00000466454 KCNC4Q03721 635 aa5.03□□□□□ -1.6
CLCA3P-202ENST00000466454 CACNB2Q08289 660 aaPredicted RBP5.03□□□□□ -1.6
CLCA3P-202ENST00000466454 ITKQ08881 620 aa5.03□□□□□ -1.6
CLCA3P-202ENST00000466454 CCDC30Q5VVM6 783 aa5.03□□□□□ -1.6
CLCA3P-202ENST00000466454 NFXL1Q6ZNB6 911 aa5.03□□□□□ -1.6
CLCA3P-202ENST00000466454 CATSPER4Q7RTX7 472 aa5.03□□□□□ -1.6
CLCA3P-202ENST00000466454 SH3RF1Q7Z6J0 888 aa5.03□□□□□ -1.6
CLCA3P-202ENST00000466454 CHMP4CQ96CF2 233 aa5.03□□□□□ -1.6
CLCA3P-202ENST00000466454 FAM210AQ96ND0 272 aa5.03□□□□□ -1.6
CLCA3P-202ENST00000466454 CITED4Q96RK1 184 aa5.03□□□□□ -1.6
CLCA3P-202ENST00000466454 POLR3CQ9BUI4 534 aaPredicted RBP5.03□□□□□ -1.6
CLCA3P-202ENST00000466454 RTCAO00442 366 aaKnown RBP5.02□□□□□ -1.61
CLCA3P-202ENST00000466454 TRIM37O94972 964 aa5.02□□□□□ -1.61
CLCA3P-202ENST00000466454 MBD4O95243 580 aa5.02□□□□□ -1.61
CLCA3P-202ENST00000466454 MX1P20591 662 aa5.02□□□□□ -1.61
CLCA3P-202ENST00000466454 HPDP32754 393 aaPredicted RBP5.02□□□□□ -1.61
CLCA3P-202ENST00000466454 CCDC15Q0P6D6 951 aa5.02□□□□□ -1.61
CLCA3P-202ENST00000466454 ORC1Q13415 861 aa5.02□□□□□ -1.61
CLCA3P-202ENST00000466454 SAFBQ15424 915 aaKnown RBP eCLIP5.02□□□□□ -1.61
CLCA3P-202ENST00000466454 SULT6B1Q6IMI4 303 aa5.02□□□□□ -1.61
CLCA3P-202ENST00000466454 KLHL10Q6JEL2 608 aa5.02□□□□□ -1.61
CLCA3P-202ENST00000466454 ATCAYQ86WG3 371 aa5.02□□□□□ -1.61
CLCA3P-202ENST00000466454 OTUD7AQ8TE49 926 aaPredicted RBP5.02□□□□□ -1.61
CLCA3P-202ENST00000466454 UROC1Q96N76 676 aa5.02□□□□□ -1.61
CLCA3P-202ENST00000466454 SPON2Q9BUD6 331 aa5.02□□□□□ -1.61
CLCA3P-202ENST00000466454 TRIM6Q9C030 488 aaPredicted RBP5.02□□□□□ -1.61
CLCA3P-202ENST00000466454 RASSF1Q9NS23 344 aa5.02□□□□□ -1.61
CLCA3P-202ENST00000466454 DIAPH3Q9NSV4 1193 aa5.02□□□□□ -1.61
CLCA3P-202ENST00000466454 WBP1LQ9NX94 342 aa5.02□□□□□ -1.61
CLCA3P-202ENST00000466454 FER1L4A9Z1Z3 1794 aa5.02□□□□□ -1.61
CLCA3P-202ENST00000466454 SCN11AQ9UI33 1791 aa5.02□□□□□ -1.61
CLCA3P-202ENST00000466454 ZBTB39O15060 712 aa5.02□□□□□ -1.61
CLCA3P-202ENST00000466454 RAB15P59190 212 aa5.02□□□□□ -1.61
CLCA3P-202ENST00000466454 MPP1Q00013 466 aa5.02□□□□□ -1.61
CLCA3P-202ENST00000466454 TRIM29Q14134 588 aa5.02□□□□□ -1.61
CLCA3P-202ENST00000466454 TRIM14Q14142 442 aa5.02□□□□□ -1.61
CLCA3P-202ENST00000466454 MTHFSDQ2M296 383 aaKnown RBP5.02□□□□□ -1.61
CLCA3P-202ENST00000466454 CCDC102BQ68D86 513 aa5.02□□□□□ -1.61
CLCA3P-202ENST00000466454 MCTP1Q6DN14 999 aa5.02□□□□□ -1.61
CLCA3P-202ENST00000466454 SRLQ86TD4 932 aa5.02□□□□□ -1.61
CLCA3P-202ENST00000466454 ELOA2Q8IYF1 753 aaPredicted RBP5.02□□□□□ -1.61
CLCA3P-202ENST00000466454 TRIM22Q8IYM9 498 aa5.02□□□□□ -1.61
CLCA3P-202ENST00000466454 OR8H1Q8NGG4 311 aa5.02□□□□□ -1.61
CLCA3P-202ENST00000466454 N4BP2L2Q92802 583 aaPredicted RBP5.02□□□□□ -1.61
CLCA3P-202ENST00000466454 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.02□□□□□ -1.61
CLCA3P-202ENST00000466454 RRN3Q9NYV6 651 aa5.02□□□□□ -1.61
CLCA3P-202ENST00000466454 TSR3Q9UJK0 312 aaKnown RBP5.02□□□□□ -1.61
CLCA3P-202ENST00000466454 ZBTB21Q9ULJ3 1066 aa5.02□□□□□ -1.61
CLCA3P-202ENST00000466454 LAMB4A4D0S4 1761 aa5.02□□□□□ -1.61
CLCA3P-202ENST00000466454 KIF1AQ12756 1690 aa5.02□□□□□ -1.61
CLCA3P-202ENST00000466454 TCHHQ07283 1943 aa5.02□□□□□ -1.61
CLCA3P-202ENST00000466454 ELP1O95163 1332 aa5.02□□□□□ -1.61
CLCA3P-202ENST00000466454 TRIM64A6NGJ6 449 aa5.01□□□□□ -1.61
CLCA3P-202ENST00000466454 TRIM64BA6NI03 449 aa5.01□□□□□ -1.61
CLCA3P-202ENST00000466454 ARHGAP33O14559 1287 aa5.01□□□□□ -1.61
CLCA3P-202ENST00000466454 SGSM2O43147 1006 aa5.01□□□□□ -1.61
CLCA3P-202ENST00000466454 PYGLP06737 847 aa5.01□□□□□ -1.61
CLCA3P-202ENST00000466454 TPM3P06753 285 aa5.01□□□□□ -1.61
CLCA3P-202ENST00000466454 HOXD12P35452 270 aa5.01□□□□□ -1.61
CLCA3P-202ENST00000466454 EMP3P54852 163 aa5.01□□□□□ -1.61
CLCA3P-202ENST00000466454 PIP4K2BP78356 416 aa5.01□□□□□ -1.61
CLCA3P-202ENST00000466454 ARMC4Q5T2S8 1044 aa5.01□□□□□ -1.61
CLCA3P-202ENST00000466454 NUGGCQ68CJ6 796 aa5.01□□□□□ -1.61
CLCA3P-202ENST00000466454 CCDC81Q6ZN84 652 aa5.01□□□□□ -1.61
CLCA3P-202ENST00000466454 RBM43Q6ZSC3 357 aaKnown RBP5.01□□□□□ -1.61
CLCA3P-202ENST00000466454 STAG2Q8N3U4 1231 aa5.01□□□□□ -1.61
CLCA3P-202ENST00000466454 CARNMT1Q8N4J0 409 aa5.01□□□□□ -1.61
CLCA3P-202ENST00000466454 ZGPATQ8N5A5 531 aaKnown RBP5.01□□□□□ -1.61
CLCA3P-202ENST00000466454 TEX9Q8N6V9 391 aa5.01□□□□□ -1.61
CLCA3P-202ENST00000466454 GABPB2Q8TAK5 448 aaPredicted RBP5.01□□□□□ -1.61
CLCA3P-202ENST00000466454 CAMKK2Q96RR4 588 aa5.01□□□□□ -1.61
CLCA3P-202ENST00000466454 PAIP2Q9BPZ3 127 aaKnown RBP5.01□□□□□ -1.61
CLCA3P-202ENST00000466454 CCDC94Q9BW85 323 aaPredicted RBP5.01□□□□□ -1.61
CLCA3P-202ENST00000466454 TARS2Q9BW92 718 aaKnown RBP5.01□□□□□ -1.61
CLCA3P-202ENST00000466454 LSG1Q9H089 658 aaKnown RBP5.01□□□□□ -1.61
CLCA3P-202ENST00000466454 DBNDD1Q9H9R9 158 aa5.01□□□□□ -1.61
CLCA3P-202ENST00000466454 IKBKGQ9Y6K9 419 aa5.01□□□□□ -1.61
CLCA3P-202ENST00000466454 MAGEB6P1A0A0J9YX57 407 aa5.01□□□□□ -1.61
CLCA3P-202ENST00000466454 TMEM127O75204 238 aa5.01□□□□□ -1.61
CLCA3P-202ENST00000466454 MAPK9P45984 424 aa5.01□□□□□ -1.61
CLCA3P-202ENST00000466454 ALDH5A1P51649 535 aaPredicted RBP5.01□□□□□ -1.61
CLCA3P-202ENST00000466454 PKP1Q13835 747 aa5.01□□□□□ -1.61
CLCA3P-202ENST00000466454 SYCP1Q15431 976 aa5.01□□□□□ -1.61
CLCA3P-202ENST00000466454 EML3Q32P44 896 aa5.01□□□□□ -1.61
CLCA3P-202ENST00000466454 SLC45A4Q5BKX6 768 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms