RNA–Protein interactions for RNA: ENST00000465627.5

UBA3-208, Transcript of ubiquitin like modifier activating enzyme 3, human

TSL 2

Gene UBA3, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA3-208	ENST00000465627	LOC285556	D6RIA3	1793 aa		10.14	□□□□□ -0.79
UBA3-208	ENST00000465627	SMCHD1	A6NHR9	2005 aa		10.14	□□□□□ -0.79
UBA3-208	ENST00000465627	PNMA6F	A0A0J9YX94	578 aa		10.14	□□□□□ -0.79
UBA3-208	ENST00000465627	USP17L10	C9JJH3	530 aa		10.14	□□□□□ -0.79
UBA3-208	ENST00000465627	hCG_1984214	I3L0E3	225 aa		10.14	□□□□□ -0.79
UBA3-208	ENST00000465627	HR	O43593	1189 aa		10.14	□□□□□ -0.79
UBA3-208	ENST00000465627	NASP	P49321	788 aa	Predicted RBP	10.14	□□□□□ -0.79
UBA3-208	ENST00000465627	AKAP17A	Q02040	695 aa	Known RBP	10.14	□□□□□ -0.79
UBA3-208	ENST00000465627	NR5A1	Q13285	461 aa		10.14	□□□□□ -0.79
UBA3-208	ENST00000465627	EARS2	Q5JPH6	523 aa	Known RBP	10.14	□□□□□ -0.79
UBA3-208	ENST00000465627	LDLRAD1	Q5T700	205 aa		10.14	□□□□□ -0.79
UBA3-208	ENST00000465627	NOSTRIN	Q8IVI9	506 aa		10.14	□□□□□ -0.79
UBA3-208	ENST00000465627	ZNF713	Q8N859	430 aa	Predicted RBP	10.14	□□□□□ -0.79
UBA3-208	ENST00000465627	CD99L2	Q8TCZ2	262 aa		10.14	□□□□□ -0.79
UBA3-208	ENST00000465627	LPAR1	Q92633	364 aa		10.14	□□□□□ -0.79
UBA3-208	ENST00000465627	SYMPK	Q92797	1274 aa	Known RBP	10.14	□□□□□ -0.79
UBA3-208	ENST00000465627	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	10.14	□□□□□ -0.79
UBA3-208	ENST00000465627	RRP36	Q96EU6	259 aa	Known RBP	10.14	□□□□□ -0.79
UBA3-208	ENST00000465627	USP28	Q96RU2	1077 aa		10.14	□□□□□ -0.79
UBA3-208	ENST00000465627	FTO	Q9C0B1	505 aa	Known RBP eCLIP	10.14	□□□□□ -0.79
UBA3-208	ENST00000465627	SH2D4A	Q9H788	454 aa		10.14	□□□□□ -0.79
UBA3-208	ENST00000465627	GDPD2	Q9HCC8	539 aa		10.14	□□□□□ -0.79
UBA3-208	ENST00000465627	GOPC	Q9HD26	462 aa		10.14	□□□□□ -0.79
UBA3-208	ENST00000465627	RCOR1	Q9UKL0	485 aa		10.14	□□□□□ -0.79
UBA3-208	ENST00000465627	AFG3L2	Q9Y4W6	797 aa		10.14	□□□□□ -0.79
UBA3-208	ENST00000465627	MORC2	Q9Y6X9	1032 aa	Predicted RBP	10.14	□□□□□ -0.79
UBA3-208	ENST00000465627	ZBTB5	O15062	677 aa		10.13	□□□□□ -0.79
UBA3-208	ENST00000465627	TM4SF4	P48230	202 aa		10.13	□□□□□ -0.79
UBA3-208	ENST00000465627	KRT85	P78386	507 aa		10.13	□□□□□ -0.79
UBA3-208	ENST00000465627	MAP3K9	P80192	1104 aa		10.13	□□□□□ -0.79
UBA3-208	ENST00000465627	VGLL4	Q14135	290 aa		10.13	□□□□□ -0.79
UBA3-208	ENST00000465627	PTPA	Q15257	358 aa		10.13	□□□□□ -0.79
UBA3-208	ENST00000465627	CCDC96	Q2M329	555 aa		10.13	□□□□□ -0.79
UBA3-208	ENST00000465627	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	10.13	□□□□□ -0.79
UBA3-208	ENST00000465627	SH3D19	Q5HYK7	790 aa		10.13	□□□□□ -0.79
UBA3-208	ENST00000465627	SYDE2	Q5VT97	1194 aa		10.13	□□□□□ -0.79
UBA3-208	ENST00000465627	GALNT17	Q6IS24	598 aa		10.13	□□□□□ -0.79
UBA3-208	ENST00000465627	FOXD4L3	Q6VB84	417 aa	Predicted RBP	10.13	□□□□□ -0.79
UBA3-208	ENST00000465627	SPICE1	Q8N0Z3	855 aa		10.13	□□□□□ -0.79
UBA3-208	ENST00000465627	ZNF280C	Q8ND82	737 aa		10.13	□□□□□ -0.79
UBA3-208	ENST00000465627	LEO1	Q8WVC0	666 aa	Predicted RBP	10.13	□□□□□ -0.79
UBA3-208	ENST00000465627	FAM161B	Q96MY7	647 aa		10.13	□□□□□ -0.79
UBA3-208	ENST00000465627	POLR3E	Q9NVU0	708 aa		10.13	□□□□□ -0.79
UBA3-208	ENST00000465627	RTEL1	Q9NZ71	1219 aa		10.13	□□□□□ -0.79
UBA3-208	ENST00000465627	TFIP11	Q9UBB9	837 aa	Known RBP	10.13	□□□□□ -0.79
UBA3-208	ENST00000465627	PRR12	Q9ULL5	1215 aa		10.13	□□□□□ -0.79
UBA3-208	ENST00000465627	PCDHA4	Q9UN74	947 aa		10.13	□□□□□ -0.79
UBA3-208	ENST00000465627		A0A0G2JMZ2	1700 aa		10.12	□□□□□ -0.79
UBA3-208	ENST00000465627	TMEM232	C9JQI7	657 aa		10.12	□□□□□ -0.79
UBA3-208	ENST00000465627	WNT7A	O00755	349 aa		10.12	□□□□□ -0.79
UBA3-208	ENST00000465627	WDR46	O15213	610 aa	Known RBP	10.12	□□□□□ -0.79
UBA3-208	ENST00000465627	EDIL3	O43854	480 aa		10.12	□□□□□ -0.79
UBA3-208	ENST00000465627	GADD45B	O75293	160 aa	Predicted RBP	10.12	□□□□□ -0.79
UBA3-208	ENST00000465627	PRPF40A	O75400	957 aa	Known RBP	10.12	□□□□□ -0.79
UBA3-208	ENST00000465627	XBP1	P17861	261 aa		10.12	□□□□□ -0.79
UBA3-208	ENST00000465627	KRT2	P35908	639 aa		10.12	□□□□□ -0.79
UBA3-208	ENST00000465627	CLK2	P49760	499 aa	Known RBP	10.12	□□□□□ -0.79
UBA3-208	ENST00000465627	BACE1	P56817	501 aa		10.12	□□□□□ -0.79
UBA3-208	ENST00000465627	TRIM29	Q14134	588 aa		10.12	□□□□□ -0.79
UBA3-208	ENST00000465627	QRICH1	Q2TAL8	776 aa		10.12	□□□□□ -0.79
UBA3-208	ENST00000465627	FAM83B	Q5T0W9	1011 aa		10.12	□□□□□ -0.79
UBA3-208	ENST00000465627	PPP1R18	Q6NYC8	613 aa		10.12	□□□□□ -0.79
UBA3-208	ENST00000465627	MOB2	Q70IA6	237 aa		10.12	□□□□□ -0.79
UBA3-208	ENST00000465627	LINC00301	Q8NCQ3	95 aa		10.12	□□□□□ -0.79
UBA3-208	ENST00000465627	GPT2	Q8TD30	523 aa		10.12	□□□□□ -0.79
UBA3-208	ENST00000465627	PIBF1	Q8WXW3	757 aa		10.12	□□□□□ -0.79
UBA3-208	ENST00000465627	PGBD1	Q96JS3	809 aa		10.12	□□□□□ -0.79
UBA3-208	ENST00000465627	SCAND2P	Q9GZW5	306 aa	Predicted RBP	10.12	□□□□□ -0.79
UBA3-208	ENST00000465627	RANBP17	Q9H2T7	1088 aa	Known RBP	10.12	□□□□□ -0.79
UBA3-208	ENST00000465627	VAT1L	Q9HCJ6	419 aa		10.12	□□□□□ -0.79
UBA3-208	ENST00000465627	NR2E3	Q9Y5X4	410 aa		10.12	□□□□□ -0.79
UBA3-208	ENST00000465627	OPLAH	O14841	1288 aa		10.11	□□□□□ -0.79
UBA3-208	ENST00000465627	YEATS4	O95619	227 aa		10.11	□□□□□ -0.79
UBA3-208	ENST00000465627	VCAM1	P19320	739 aa		10.11	□□□□□ -0.79
UBA3-208	ENST00000465627	CALML3	P27482	149 aa		10.11	□□□□□ -0.79
UBA3-208	ENST00000465627	STAT2	P52630	851 aa		10.11	□□□□□ -0.79
UBA3-208	ENST00000465627	SPP2	Q13103	211 aa		10.11	□□□□□ -0.79
UBA3-208	ENST00000465627	MTMR2	Q13614	643 aa		10.11	□□□□□ -0.79
UBA3-208	ENST00000465627	CDC37	Q16543	378 aa	Predicted RBP	10.11	□□□□□ -0.79
UBA3-208	ENST00000465627	HEATR3	Q7Z4Q2	680 aa		10.11	□□□□□ -0.79
UBA3-208	ENST00000465627	HOMER1	Q86YM7	354 aa		10.11	□□□□□ -0.79
UBA3-208	ENST00000465627	BLID	Q8IZY5	108 aa		10.11	□□□□□ -0.79
UBA3-208	ENST00000465627	CCDC148	Q8NFR7	591 aa		10.11	□□□□□ -0.79
UBA3-208	ENST00000465627	COA7	Q96BR5	231 aa		10.11	□□□□□ -0.79
UBA3-208	ENST00000465627	KCNK17	Q96T54	332 aa		10.11	□□□□□ -0.79
UBA3-208	ENST00000465627	CFHR5	Q9BXR6	569 aa		10.11	□□□□□ -0.79
UBA3-208	ENST00000465627	FBXO28	Q9NVF7	368 aa		10.11	□□□□□ -0.79
UBA3-208	ENST00000465627	FEM1B	Q9UK73	627 aa		10.11	□□□□□ -0.79
UBA3-208	ENST00000465627	PCDHA6	Q9UN73	950 aa		10.11	□□□□□ -0.79
UBA3-208	ENST00000465627	ADAMTS5	Q9UNA0	930 aa		10.11	□□□□□ -0.79
UBA3-208	ENST00000465627	PCDHA8	Q9Y5H6	950 aa		10.11	□□□□□ -0.79
UBA3-208	ENST00000465627	CLIC4	Q9Y696	253 aa		10.11	□□□□□ -0.79
UBA3-208	ENST00000465627	ZHX2	Q9Y6X8	837 aa		10.11	□□□□□ -0.79
UBA3-208	ENST00000465627	PKD1L2	Q7Z442	2459 aa		10.1	□□□□□ -0.79
UBA3-208	ENST00000465627	ZNF536	O15090	1300 aa		10.1	□□□□□ -0.79
UBA3-208	ENST00000465627	COL11A1	P12107	1806 aa	Predicted RBP	10.1	□□□□□ -0.79
UBA3-208	ENST00000465627	SPDYE5	A6NIY4	337 aa		10.1	□□□□□ -0.79
UBA3-208	ENST00000465627	UNCX	A6NJT0	531 aa		10.1	□□□□□ -0.79
UBA3-208	ENST00000465627	C19orf81	C9J6K1	198 aa		10.1	□□□□□ -0.79
UBA3-208	ENST00000465627	FIBP	O43427	364 aa		10.1	□□□□□ -0.79

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