RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 BICD2Q8TD16 824 aa19.71■□□□□ 0.75
PTPRU-206ENST00000465525 CFHR5Q9BXR6 569 aa19.71■□□□□ 0.75
PTPRU-206ENST00000465525 FTOQ9C0B1 505 aaKnown RBP eCLIP19.71■□□□□ 0.75
PTPRU-206ENST00000465525 SPATC1LQ9H0A9 340 aa19.71■□□□□ 0.75
PTPRU-206ENST00000465525 MORF4L1Q9UBU8 362 aa19.71■□□□□ 0.75
PTPRU-206ENST00000465525 TRPA1O75762 1119 aa19.7■□□□□ 0.74
PTPRU-206ENST00000465525 NCLP19338 710 aaKnown RBP19.7■□□□□ 0.74
PTPRU-206ENST00000465525 ATP2B1P20020 1258 aa19.7■□□□□ 0.74
PTPRU-206ENST00000465525 NBR1Q14596 966 aa19.7■□□□□ 0.74
PTPRU-206ENST00000465525 BRAPQ7Z569 592 aa19.7■□□□□ 0.74
PTPRU-206ENST00000465525 GPRC5AQ8NFJ5 357 aa19.7■□□□□ 0.74
PTPRU-206ENST00000465525 MOV10L1Q9BXT6 1211 aaKnown RBP19.7■□□□□ 0.74
PTPRU-206ENST00000465525 TFIP11Q9UBB9 837 aaKnown RBP19.7■□□□□ 0.74
PTPRU-206ENST00000465525 ADGRA2Q96PE1 1338 aa19.7■□□□□ 0.74
PTPRU-206ENST00000465525 CCDC194A0A1B0GVG4 234 aa19.69■□□□□ 0.74
PTPRU-206ENST00000465525 CLK2P49760 499 aaKnown RBP19.69■□□□□ 0.74
PTPRU-206ENST00000465525 CEBPZQ03701 1054 aaKnown RBP19.69■□□□□ 0.74
PTPRU-206ENST00000465525 MYSM1Q5VVJ2 828 aa19.69■□□□□ 0.74
PTPRU-206ENST00000465525 C17orf99Q6UX52 265 aa19.69■□□□□ 0.74
PTPRU-206ENST00000465525 NSMFQ6X4W1 530 aa19.69■□□□□ 0.74
PTPRU-206ENST00000465525 FCHSD1Q86WN1 690 aa19.69■□□□□ 0.74
PTPRU-206ENST00000465525 NCAPG2Q86XI2 1143 aa19.69■□□□□ 0.74
PTPRU-206ENST00000465525 CPA4Q9UI42 421 aa19.69■□□□□ 0.74
PTPRU-206ENST00000465525 CEP350Q5VT06 3117 aa19.69■□□□□ 0.74
PTPRU-206ENST00000465525 BCRP11274 1271 aa19.68■□□□□ 0.74
PTPRU-206ENST00000465525 ERVK-9P63128 1117 aa19.68■□□□□ 0.74
PTPRU-206ENST00000465525 ERVK-24P63145 666 aa19.68■□□□□ 0.74
PTPRU-206ENST00000465525 FAM110CQ1W6H9 321 aa19.68■□□□□ 0.74
PTPRU-206ENST00000465525 RIOX2Q8IUF8 465 aa19.68■□□□□ 0.74
PTPRU-206ENST00000465525 BEGAINQ9BUH8 593 aa19.68■□□□□ 0.74
PTPRU-206ENST00000465525 SAGE1Q9NXZ1 904 aa19.68■□□□□ 0.74
PTPRU-206ENST00000465525 CNPY2Q9Y2B0 182 aa19.68■□□□□ 0.74
PTPRU-206ENST00000465525 GCOM1H8Y6P7 765 aaPredicted RBP19.68■□□□□ 0.74
PTPRU-206ENST00000465525 WNT7AO00755 349 aa19.68■□□□□ 0.74
PTPRU-206ENST00000465525 ECM2O94769 699 aaPredicted RBP19.68■□□□□ 0.74
PTPRU-206ENST00000465525 BAG4O95429 457 aaKnown RBP19.68■□□□□ 0.74
PTPRU-206ENST00000465525 POLR2MP0CAP2 368 aa19.68■□□□□ 0.74
PTPRU-206ENST00000465525 TOB1P50616 345 aaPredicted RBP19.68■□□□□ 0.74
PTPRU-206ENST00000465525 CCNA1P78396 465 aa19.68■□□□□ 0.74
PTPRU-206ENST00000465525 INF2Q27J81 1249 aa19.68■□□□□ 0.74
PTPRU-206ENST00000465525 SLC30A10Q6XR72 485 aa19.68■□□□□ 0.74
PTPRU-206ENST00000465525 ATP6V1DQ9Y5K8 247 aa19.68■□□□□ 0.74
PTPRU-206ENST00000465525 LCTP09848 1927 aa19.67■□□□□ 0.74
PTPRU-206ENST00000465525 TBC1D8O95759 1140 aa19.67■□□□□ 0.74
PTPRU-206ENST00000465525 SLC25A27O95847 323 aa19.67■□□□□ 0.74
PTPRU-206ENST00000465525 ERCC3P19447 782 aa19.67■□□□□ 0.74
PTPRU-206ENST00000465525 TKFCQ3LXA3 575 aa19.67■□□□□ 0.74
PTPRU-206ENST00000465525 WDR78Q5VTH9 848 aa19.67■□□□□ 0.74
PTPRU-206ENST00000465525 KRT25Q7Z3Z0 450 aa19.67■□□□□ 0.74
PTPRU-206ENST00000465525 PURBQ96QR8 312 aaKnown RBP19.67■□□□□ 0.74
PTPRU-206ENST00000465525 ACAD9Q9H845 621 aa19.67■□□□□ 0.74
PTPRU-206ENST00000465525 GDPD2Q9HCC8 539 aa19.67■□□□□ 0.74
PTPRU-206ENST00000465525 COL20A1Q9P218 1284 aa19.67■□□□□ 0.74
PTPRU-206ENST00000465525 COPB2P35606 906 aa19.66■□□□□ 0.74
PTPRU-206ENST00000465525 NONOQ15233 471 aaKnown RBP eCLIP19.66■□□□□ 0.74
PTPRU-206ENST00000465525 USP28Q96RU2 1077 aa19.66■□□□□ 0.74
PTPRU-206ENST00000465525 ANO3Q9BYT9 981 aa19.66■□□□□ 0.74
PTPRU-206ENST00000465525 GLT8D2Q9H1C3 349 aa19.66■□□□□ 0.74
PTPRU-206ENST00000465525 PORCNQ9H237 461 aa19.66■□□□□ 0.74
PTPRU-206ENST00000465525 ZNFX1Q9P2E3 1918 aaKnown RBP19.66■□□□□ 0.74
PTPRU-206ENST00000465525 PLXNB2O15031 1838 aa19.66■□□□□ 0.74
PTPRU-206ENST00000465525 PIK3CDO00329 1044 aa19.65■□□□□ 0.74
PTPRU-206ENST00000465525 HSD17B4P51659 736 aa19.65■□□□□ 0.74
PTPRU-206ENST00000465525 RPS6P62753 249 aaKnown RBP19.65■□□□□ 0.74
PTPRU-206ENST00000465525 UBXN2AP68543 259 aa19.65■□□□□ 0.74
PTPRU-206ENST00000465525 BAATQ14032 418 aaPredicted RBP19.65■□□□□ 0.74
PTPRU-206ENST00000465525 RNF207Q6ZRF8 634 aa19.65■□□□□ 0.74
PTPRU-206ENST00000465525 MCF2L2Q86YR7 1114 aa19.65■□□□□ 0.74
PTPRU-206ENST00000465525 SHCBP1Q8NEM2 672 aa19.65■□□□□ 0.74
PTPRU-206ENST00000465525 TBCKQ8TEA7 893 aa19.65■□□□□ 0.74
PTPRU-206ENST00000465525 EFCC1Q9HA90 598 aa19.65■□□□□ 0.74
PTPRU-206ENST00000465525 WBP1LQ9NX94 342 aa19.65■□□□□ 0.74
PTPRU-206ENST00000465525 CLIC4Q9Y696 253 aa19.65■□□□□ 0.74
PTPRU-206ENST00000465525 PCNTO95613 3336 aa19.65■□□□□ 0.74
PTPRU-206ENST00000465525 SPDYE3A6NKU9 549 aa19.65■□□□□ 0.74
PTPRU-206ENST00000465525 FIBPO43427 364 aa19.65■□□□□ 0.74
PTPRU-206ENST00000465525 CHST13Q8NET6 341 aa19.65■□□□□ 0.74
PTPRU-206ENST00000465525 ZNF396Q96N95 335 aaPredicted RBP19.65■□□□□ 0.74
PTPRU-206ENST00000465525 MROH8Q9H579 483 aa19.65■□□□□ 0.74
PTPRU-206ENST00000465525 A1CFQ9NQ94 594 aaKnown RBP19.65■□□□□ 0.74
PTPRU-206ENST00000465525 PCDHB6Q9Y5E3 794 aa19.65■□□□□ 0.74
PTPRU-206ENST00000465525 CCAR1Q8IX12 1150 aaKnown RBP19.64■□□□□ 0.73
PTPRU-206ENST00000465525 SYTL5Q8TDW5 730 aaPredicted RBP19.64■□□□□ 0.73
PTPRU-206ENST00000465525 FBXO40Q9UH90 709 aa19.64■□□□□ 0.73
PTPRU-206ENST00000465525 NOL7Q9UMY1 257 aaKnown RBP19.64■□□□□ 0.73
PTPRU-206ENST00000465525 AP3B2Q13367 1082 aa19.63■□□□□ 0.73
PTPRU-206ENST00000465525 ZNF174Q15697 407 aa19.63■□□□□ 0.73
PTPRU-206ENST00000465525 RILPL1Q5EBL4 403 aa19.63■□□□□ 0.73
PTPRU-206ENST00000465525 ANKRD35Q8N283 1001 aa19.63■□□□□ 0.73
PTPRU-206ENST00000465525 JMYQ8N9B5 988 aa19.63■□□□□ 0.73
PTPRU-206ENST00000465525 CYP39A1Q9NYL5 469 aa19.63■□□□□ 0.73
PTPRU-206ENST00000465525 KRT85P78386 507 aa19.62■□□□□ 0.73
PTPRU-206ENST00000465525 LETM2Q2VYF4 491 aa19.62■□□□□ 0.73
PTPRU-206ENST00000465525 TPRNQ4KMQ1 711 aa19.62■□□□□ 0.73
PTPRU-206ENST00000465525 TTC38Q5R3I4 469 aa19.62■□□□□ 0.73
PTPRU-206ENST00000465525 ZFP91Q96JP5 570 aaPredicted RBP19.62■□□□□ 0.73
PTPRU-206ENST00000465525 GBP4Q96PP9 640 aa19.62■□□□□ 0.73
PTPRU-206ENST00000465525 TAAR1Q96RJ0 339 aa19.62■□□□□ 0.73
PTPRU-206ENST00000465525 EDIL3O43854 480 aa19.62■□□□□ 0.73
PTPRU-206ENST00000465525 MAPK4P31152 587 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms