RNA–Protein interactions for RNA: ENST00000465441.1

CSPG5-204, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 4

Gene CSPG5, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-204ENST00000465441 RNF207Q6ZRF8 634 aa24.48■■□□□ 1.51
CSPG5-204ENST00000465441 PPP1R12CQ9BZL4 782 aa24.48■■□□□ 1.51
CSPG5-204ENST00000465441 CPVLQ9H3G5 476 aa24.48■■□□□ 1.51
CSPG5-204ENST00000465441 LCTP09848 1927 aa24.47■■□□□ 1.51
CSPG5-204ENST00000465441 LOC102724159A0A0B4J2E5 919 aa24.47■■□□□ 1.51
CSPG5-204ENST00000465441 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.47■■□□□ 1.51
CSPG5-204ENST00000465441 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.47■■□□□ 1.51
CSPG5-204ENST00000465441 CSF2RAP15509 400 aa24.47■■□□□ 1.51
CSPG5-204ENST00000465441 RPS6P62753 249 aaKnown RBP24.47■■□□□ 1.51
CSPG5-204ENST00000465441 PPIGQ13427 754 aaKnown RBP eCLIP24.47■■□□□ 1.51
CSPG5-204ENST00000465441 PWP2Q15269 919 aaKnown RBP24.47■■□□□ 1.51
CSPG5-204ENST00000465441 DUSP28Q4G0W2 176 aa24.47■■□□□ 1.51
CSPG5-204ENST00000465441 CCDC178Q5BJE1 867 aa24.47■■□□□ 1.51
CSPG5-204ENST00000465441 TMEM240Q5SV17 173 aa24.47■■□□□ 1.51
CSPG5-204ENST00000465441 GPATCH4Q5T3I0 446 aaKnown RBP24.47■■□□□ 1.51
CSPG5-204ENST00000465441 IQCA1Q86XH1 822 aa24.47■■□□□ 1.51
CSPG5-204ENST00000465441 ANKS1AQ92625 1134 aa24.47■■□□□ 1.51
CSPG5-204ENST00000465441 DSCC1Q9BVC3 393 aa24.47■■□□□ 1.51
CSPG5-204ENST00000465441 WDR11Q9BZH6 1224 aa24.47■■□□□ 1.51
CSPG5-204ENST00000465441 ZSWIM5Q9P217 1185 aa24.47■■□□□ 1.51
CSPG5-204ENST00000465441 WDR19Q8NEZ3 1342 aa24.46■■□□□ 1.51
CSPG5-204ENST00000465441 RBM47A0AV96 593 aaKnown RBP24.46■■□□□ 1.51
CSPG5-204ENST00000465441 B4E1Z4 1266 aa24.46■■□□□ 1.51
CSPG5-204ENST00000465441 NT5C2P49902 561 aa24.46■■□□□ 1.51
CSPG5-204ENST00000465441 TMEM199Q8N511 208 aa24.46■■□□□ 1.51
CSPG5-204ENST00000465441 PNMA1Q8ND90 353 aa24.46■■□□□ 1.51
CSPG5-204ENST00000465441 LAMA2P24043 3122 aaKnown RBP24.46■■□□□ 1.51
CSPG5-204ENST00000465441 ACRP10323 421 aa24.45■■□□□ 1.5
CSPG5-204ENST00000465441 CYP2C18P33260 490 aa24.45■■□□□ 1.5
CSPG5-204ENST00000465441 PSMC6P62333 389 aa24.45■■□□□ 1.5
CSPG5-204ENST00000465441 IMMTQ16891 758 aaKnown RBP24.44■■□□□ 1.5
CSPG5-204ENST00000465441 USH1GQ495M9 461 aa24.44■■□□□ 1.5
CSPG5-204ENST00000465441 ZSCAN10Q96SZ4 725 aaPredicted RBP24.44■■□□□ 1.5
CSPG5-204ENST00000465441 SEZ6LQ9BYH1 1024 aa24.44■■□□□ 1.5
CSPG5-204ENST00000465441 KAT14Q9H8E8 782 aa24.44■■□□□ 1.5
CSPG5-204ENST00000465441 LRRC37A2A6NM11 1700 aa24.44■■□□□ 1.5
CSPG5-204ENST00000465441 ZNF365Q70YC5 407 aa24.43■■□□□ 1.5
CSPG5-204ENST00000465441 RGS22Q8NE09 1264 aa24.43■■□□□ 1.5
CSPG5-204ENST00000465441 DNERQ8NFT8 737 aa24.43■■□□□ 1.5
CSPG5-204ENST00000465441 MYLIPQ8WY64 445 aa24.43■■□□□ 1.5
CSPG5-204ENST00000465441 TBC1D5Q92609 795 aa24.43■■□□□ 1.5
CSPG5-204ENST00000465441 TRPV6Q9H1D0 765 aa24.43■■□□□ 1.5
CSPG5-204ENST00000465441 CTNNA3Q9UI47 895 aa24.43■■□□□ 1.5
CSPG5-204ENST00000465441 SUPT16HQ9Y5B9 1047 aaKnown RBP24.43■■□□□ 1.5
CSPG5-204ENST00000465441 EDNRBP24530 442 aa24.42■■□□□ 1.5
CSPG5-204ENST00000465441 PDE4AP27815 886 aa24.42■■□□□ 1.5
CSPG5-204ENST00000465441 PDE4DQ08499 809 aa24.42■■□□□ 1.5
CSPG5-204ENST00000465441 ADGRF4Q8IZF3 695 aa24.42■■□□□ 1.5
CSPG5-204ENST00000465441 ENAHQ8N8S7 591 aaPredicted RBP24.42■■□□□ 1.5
CSPG5-204ENST00000465441 IL25Q9H293 177 aa24.42■■□□□ 1.5
CSPG5-204ENST00000465441 UMODL1Q5DID0 1318 aa24.41■■□□□ 1.5
CSPG5-204ENST00000465441 TMEM265A0A087WTH1 108 aa24.41■■□□□ 1.5
CSPG5-204ENST00000465441 B4GALT4O60513 344 aa24.41■■□□□ 1.5
CSPG5-204ENST00000465441 CDC37Q16543 378 aaPredicted RBP24.41■■□□□ 1.5
CSPG5-204ENST00000465441 RASIP1Q5U651 963 aa24.41■■□□□ 1.5
CSPG5-204ENST00000465441 OR6J1Q8NGC5 347 aa24.41■■□□□ 1.5
CSPG5-204ENST00000465441 MPHOSPH6Q99547 160 aaKnown RBP24.41■■□□□ 1.5
CSPG5-204ENST00000465441 KRT23Q9C075 422 aa24.41■■□□□ 1.5
CSPG5-204ENST00000465441 HIPK3Q9H422 1215 aa24.41■■□□□ 1.5
CSPG5-204ENST00000465441 IL23AQ9NPF7 189 aa24.41■■□□□ 1.5
CSPG5-204ENST00000465441 DNAJB2P25686 324 aa24.4■■□□□ 1.5
CSPG5-204ENST00000465441 VAT1LQ9HCJ6 419 aa24.4■■□□□ 1.5
CSPG5-204ENST00000465441 POLR3EQ9NVU0 708 aa24.4■■□□□ 1.5
CSPG5-204ENST00000465441 TNKSO95271 1327 aa24.39■■□□□ 1.5
CSPG5-204ENST00000465441 GRXCR1A8MXD5 290 aa24.39■■□□□ 1.49
CSPG5-204ENST00000465441 MYL3P08590 195 aa24.39■■□□□ 1.49
CSPG5-204ENST00000465441 CPT1AP50416 773 aa24.39■■□□□ 1.49
CSPG5-204ENST00000465441 CCL23P55773 120 aa24.39■■□□□ 1.49
CSPG5-204ENST00000465441 PURAQ00577 322 aaKnown RBP24.39■■□□□ 1.49
CSPG5-204ENST00000465441 ASPRV1Q53RT3 343 aa24.39■■□□□ 1.49
CSPG5-204ENST00000465441 PSRC1Q6PGN9 363 aaPredicted RBP24.39■■□□□ 1.49
CSPG5-204ENST00000465441 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.39■■□□□ 1.49
CSPG5-204ENST00000465441 COPS5Q92905 334 aa24.39■■□□□ 1.49
CSPG5-204ENST00000465441 NOC4LQ9BVI4 516 aaKnown RBP24.39■■□□□ 1.49
CSPG5-204ENST00000465441 B4DLN1 442 aa24.38■■□□□ 1.49
CSPG5-204ENST00000465441 NKRFO15226 690 aaKnown RBP eCLIP24.38■■□□□ 1.49
CSPG5-204ENST00000465441 GSPT1P15170 499 aaKnown RBP24.38■■□□□ 1.49
CSPG5-204ENST00000465441 MRPL12P52815 198 aaKnown RBP24.38■■□□□ 1.49
CSPG5-204ENST00000465441 GRIN2CQ14957 1233 aa24.38■■□□□ 1.49
CSPG5-204ENST00000465441 SCFD2Q8WU76 684 aa24.38■■□□□ 1.49
CSPG5-204ENST00000465441 TAAR1Q96RJ0 339 aa24.38■■□□□ 1.49
CSPG5-204ENST00000465441 ALDH8A1Q9H2A2 487 aaPredicted RBP24.38■■□□□ 1.49
CSPG5-204ENST00000465441 CNNM2Q9H8M5 875 aa24.38■■□□□ 1.49
CSPG5-204ENST00000465441 ABCB11O95342 1321 aa24.37■■□□□ 1.49
CSPG5-204ENST00000465441 FGBP02675 491 aa24.37■■□□□ 1.49
CSPG5-204ENST00000465441 PARP1P09874 1014 aaKnown RBP24.37■■□□□ 1.49
CSPG5-204ENST00000465441 TXNP10599 105 aaKnown RBP24.37■■□□□ 1.49
CSPG5-204ENST00000465441 PBX2P40425 430 aa24.37■■□□□ 1.49
CSPG5-204ENST00000465441 PPP2R5BQ15173 497 aa24.37■■□□□ 1.49
CSPG5-204ENST00000465441 QRICH1Q2TAL8 776 aa24.37■■□□□ 1.49
CSPG5-204ENST00000465441 TTC22Q5TAA0 569 aa24.37■■□□□ 1.49
CSPG5-204ENST00000465441 MAFAQ8NHW3 353 aaPredicted RBP24.37■■□□□ 1.49
CSPG5-204ENST00000465441 SYTL5Q8TDW5 730 aaPredicted RBP24.37■■□□□ 1.49
CSPG5-204ENST00000465441 HERVK_113Q902F9 699 aa24.37■■□□□ 1.49
CSPG5-204ENST00000465441 TIFAQ96CG3 184 aa24.37■■□□□ 1.49
CSPG5-204ENST00000465441 MTG1Q9BT17 334 aaPredicted RBP24.37■■□□□ 1.49
CSPG5-204ENST00000465441 MAF1Q9H063 256 aa24.37■■□□□ 1.49
CSPG5-204ENST00000465441 ZNF576Q9H609 170 aa24.37■■□□□ 1.49
CSPG5-204ENST00000465441 JMJD4Q9H9V9 463 aa24.37■■□□□ 1.49
CSPG5-204ENST00000465441 GPHNQ9NQX3 736 aaPredicted RBP24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms