RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 A0A1B0GUL7 405 aa11.46□□□□□ -0.57
APP-213ENST00000464867 GJA9P57773 515 aa11.46□□□□□ -0.57
APP-213ENST00000464867 TTLL4Q14679 1199 aa11.46□□□□□ -0.57
APP-213ENST00000464867 PKDCCQ504Y2 493 aa11.46□□□□□ -0.57
APP-213ENST00000464867 TTC6Q86TZ1 520 aa11.46□□□□□ -0.57
APP-213ENST00000464867 DDX11Q96FC9 970 aa11.46□□□□□ -0.57
APP-213ENST00000464867 CACNA1BQ00975 2339 aa11.45□□□□□ -0.58
APP-213ENST00000464867 DGAT1O75907 488 aa11.45□□□□□ -0.58
APP-213ENST00000464867 DXOO77932 396 aaKnown RBP11.45□□□□□ -0.58
APP-213ENST00000464867 CD2BP2O95400 341 aaKnown RBP11.45□□□□□ -0.58
APP-213ENST00000464867 USP5P45974 858 aa11.45□□□□□ -0.58
APP-213ENST00000464867 ITGA7Q13683 1181 aa11.45□□□□□ -0.58
APP-213ENST00000464867 ACVR2BQ13705 512 aa11.45□□□□□ -0.58
APP-213ENST00000464867 AMHR2Q16671 573 aa11.45□□□□□ -0.58
APP-213ENST00000464867 DEFB128Q7Z7B8 93 aa11.45□□□□□ -0.58
APP-213ENST00000464867 HERC6Q8IVU3 1022 aa11.45□□□□□ -0.58
APP-213ENST00000464867 PRSS33Q8NF86 280 aa11.45□□□□□ -0.58
APP-213ENST00000464867 ATG4CQ96DT6 458 aa11.45□□□□□ -0.58
APP-213ENST00000464867 SCLYQ96I15 445 aa11.45□□□□□ -0.58
APP-213ENST00000464867 UPF3AQ9H1J1 476 aaKnown RBP11.45□□□□□ -0.58
APP-213ENST00000464867 WNT8AQ9H1J5 351 aa11.45□□□□□ -0.58
APP-213ENST00000464867 EHD4Q9H223 541 aa11.45□□□□□ -0.58
APP-213ENST00000464867 PRKAG3Q9UGI9 489 aa11.45□□□□□ -0.58
APP-213ENST00000464867 HDAC5Q9UQL6 1122 aa11.45□□□□□ -0.58
APP-213ENST00000464867 COL4A4P53420 1690 aaPredicted RBP11.44□□□□□ -0.58
APP-213ENST00000464867 FAM187AA6NFU0 413 aa11.44□□□□□ -0.58
APP-213ENST00000464867 MPHOSPH10O00566 681 aaKnown RBP11.44□□□□□ -0.58
APP-213ENST00000464867 ZEB2O60315 1214 aa11.44□□□□□ -0.58
APP-213ENST00000464867 LPXNO60711 386 aa11.44□□□□□ -0.58
APP-213ENST00000464867 STAT3P40763 770 aa11.44□□□□□ -0.58
APP-213ENST00000464867 TMEM132BQ14DG7 1078 aa11.44□□□□□ -0.58
APP-213ENST00000464867 CCDC144BQ3MJ40 725 aa11.44□□□□□ -0.58
APP-213ENST00000464867 NOL8Q76FK4 1167 aaKnown RBP11.44□□□□□ -0.58
APP-213ENST00000464867 RIOX2Q8IUF8 465 aa11.44□□□□□ -0.58
APP-213ENST00000464867 SUGP1Q8IWZ8 645 aaKnown RBP11.44□□□□□ -0.58
APP-213ENST00000464867 TRPV6Q9H1D0 765 aa11.44□□□□□ -0.58
APP-213ENST00000464867 ABHD16BQ9H3Z7 469 aa11.44□□□□□ -0.58
APP-213ENST00000464867 SH2D4AQ9H788 454 aa11.44□□□□□ -0.58
APP-213ENST00000464867 TRIOO75962 3097 aa11.44□□□□□ -0.58
APP-213ENST00000464867 SNAI1O95863 264 aaPredicted RBP11.43□□□□□ -0.58
APP-213ENST00000464867 UQCRFS1P1P0C7P4 283 aa11.43□□□□□ -0.58
APP-213ENST00000464867 SUPT20HL2P0C7V6 817 aa11.43□□□□□ -0.58
APP-213ENST00000464867 UBTFL1P0CB47 393 aaPredicted RBP11.43□□□□□ -0.58
APP-213ENST00000464867 RFC2P35250 354 aa11.43□□□□□ -0.58
APP-213ENST00000464867 KCNJ6P48051 423 aa11.43□□□□□ -0.58
APP-213ENST00000464867 SEPT2Q15019 361 aa11.43□□□□□ -0.58
APP-213ENST00000464867 CXCL17Q6UXB2 119 aa11.43□□□□□ -0.58
APP-213ENST00000464867 PI16Q6UXB8 463 aa11.43□□□□□ -0.58
APP-213ENST00000464867 MAMDC4Q6UXC1 1216 aa11.43□□□□□ -0.58
APP-213ENST00000464867 CERS3Q8IU89 383 aa11.43□□□□□ -0.58
APP-213ENST00000464867 WDR63Q8IWG1 891 aa11.43□□□□□ -0.58
APP-213ENST00000464867 SLC43A3Q8NBI5 491 aa11.43□□□□□ -0.58
APP-213ENST00000464867 GDPD5Q8WTR4 605 aa11.43□□□□□ -0.58
APP-213ENST00000464867 ANKS1AQ92625 1134 aa11.43□□□□□ -0.58
APP-213ENST00000464867 FTOQ9C0B1 505 aaKnown RBP eCLIP11.43□□□□□ -0.58
APP-213ENST00000464867 PCDHGC3Q9UN70 934 aa11.43□□□□□ -0.58
APP-213ENST00000464867 COL11A1P12107 1806 aaPredicted RBP11.43□□□□□ -0.58
APP-213ENST00000464867 CACNA1GO43497 2377 aa11.42□□□□□ -0.58
APP-213ENST00000464867 PTPRCP08575 1304 aa11.42□□□□□ -0.58
APP-213ENST00000464867 RIF1Q5UIP0 2472 aaKnown RBP11.42□□□□□ -0.58
APP-213ENST00000464867 C5orf42Q9H799 3197 aa11.42□□□□□ -0.58
APP-213ENST00000464867 B4GALT4O60513 344 aa11.42□□□□□ -0.58
APP-213ENST00000464867 BEX3Q00994 111 aa11.42□□□□□ -0.58
APP-213ENST00000464867 EP400NLQ6ZTU2 488 aa11.42□□□□□ -0.58
APP-213ENST00000464867 PBXIP1Q96AQ6 731 aa11.42□□□□□ -0.58
APP-213ENST00000464867 AGBL1Q96MI9 1066 aa11.42□□□□□ -0.58
APP-213ENST00000464867 POP1Q99575 1024 aaKnown RBP11.42□□□□□ -0.58
APP-213ENST00000464867 ARHGEF10LQ9HCE6 1279 aa11.42□□□□□ -0.58
APP-213ENST00000464867 COPRSQ9NQ92 184 aa11.42□□□□□ -0.58
APP-213ENST00000464867 CTNNA3Q9UI47 895 aa11.42□□□□□ -0.58
APP-213ENST00000464867 PA2G4Q9UQ80 394 aaKnown RBP11.42□□□□□ -0.58
APP-213ENST00000464867 A0A1W2PRG0 241 aa11.41□□□□□ -0.58
APP-213ENST00000464867 IGSF3O75054 1194 aa11.41□□□□□ -0.58
APP-213ENST00000464867 ARID4AP29374 1257 aaPredicted RBP11.41□□□□□ -0.58
APP-213ENST00000464867 ZP2Q05996 745 aa11.41□□□□□ -0.58
APP-213ENST00000464867 TFCP2Q12800 502 aa11.41□□□□□ -0.58
APP-213ENST00000464867 BMP8AQ7Z5Y6 402 aa11.41□□□□□ -0.58
APP-213ENST00000464867 ADHFE1Q8IWW8 467 aa11.41□□□□□ -0.58
APP-213ENST00000464867 SPICE1Q8N0Z3 855 aa11.41□□□□□ -0.58
APP-213ENST00000464867 RETREG2Q8NC44 543 aa11.41□□□□□ -0.58
APP-213ENST00000464867 SPIRE2Q8WWL2 714 aa11.41□□□□□ -0.58
APP-213ENST00000464867 ATOH1Q92858 354 aaPredicted RBP11.41□□□□□ -0.58
APP-213ENST00000464867 CRBNQ96SW2 442 aa11.41□□□□□ -0.58
APP-213ENST00000464867 AP5M1Q9H0R1 490 aa11.41□□□□□ -0.58
APP-213ENST00000464867 MTUS1Q9ULD2 1270 aa11.41□□□□□ -0.58
APP-213ENST00000464867 CACNA1HO95180 2353 aa11.41□□□□□ -0.58
APP-213ENST00000464867 SCN5AQ14524 2016 aa11.4□□□□□ -0.58
APP-213ENST00000464867 MCM3APO60318 1980 aa11.4□□□□□ -0.58
APP-213ENST00000464867 H3BQ06 376 aaPredicted RBP11.4□□□□□ -0.58
APP-213ENST00000464867 WDR46O15213 610 aaKnown RBP11.4□□□□□ -0.58
APP-213ENST00000464867 ZBTB24O43167 697 aaPredicted RBP11.4□□□□□ -0.58
APP-213ENST00000464867 BAIAP3O94812 1187 aa11.4□□□□□ -0.58
APP-213ENST00000464867 ARHGEF15O94989 841 aa11.4□□□□□ -0.58
APP-213ENST00000464867 GUCY1A2P33402 732 aa11.4□□□□□ -0.58
APP-213ENST00000464867 TNFAIP2Q03169 654 aa11.4□□□□□ -0.58
APP-213ENST00000464867 TCF15Q12870 199 aa11.4□□□□□ -0.58
APP-213ENST00000464867 FSCN1Q16658 493 aaKnown RBP11.4□□□□□ -0.58
APP-213ENST00000464867 NEK9Q8TD19 979 aa11.4□□□□□ -0.58
APP-213ENST00000464867 EDAQ92838 391 aa11.4□□□□□ -0.58
APP-213ENST00000464867 TGS1Q96RS0 853 aaKnown RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms