RNA–Protein interactions for RNA: ENST00000464646.1

RPP40-203, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5 BASIC

Gene RPP40, Length 1,042 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-203ENST00000464646 NOVP48745 357 aa16.18■□□□□ 0.18
RPP40-203ENST00000464646 MRPL12P52815 198 aaKnown RBP16.18■□□□□ 0.18
RPP40-203ENST00000464646 PSMC6P62333 389 aa16.18■□□□□ 0.18
RPP40-203ENST00000464646 ITGA7Q13683 1181 aa16.18■□□□□ 0.18
RPP40-203ENST00000464646 TAPT1Q6NXT6 567 aa16.18■□□□□ 0.18
RPP40-203ENST00000464646 OR6J1Q8NGC5 347 aa16.18■□□□□ 0.18
RPP40-203ENST00000464646 ZSCAN10Q96SZ4 725 aaPredicted RBP16.18■□□□□ 0.18
RPP40-203ENST00000464646 KRT23Q9C075 422 aa16.18■□□□□ 0.18
RPP40-203ENST00000464646 GNEQ9Y223 722 aaKnown RBP16.18■□□□□ 0.18
RPP40-203ENST00000464646 ASTN1O14525 1302 aa16.18■□□□□ 0.18
RPP40-203ENST00000464646 MYH6P13533 1939 aa16.17■□□□□ 0.18
RPP40-203ENST00000464646 SZT2Q5T011 3432 aa16.17■□□□□ 0.18
RPP40-203ENST00000464646 CDK7P50613 346 aa16.17■□□□□ 0.18
RPP40-203ENST00000464646 RPS6P62753 249 aaKnown RBP16.17■□□□□ 0.18
RPP40-203ENST00000464646 SMAD3P84022 425 aaKnown RBP16.17■□□□□ 0.18
RPP40-203ENST00000464646 CDC37Q16543 378 aaPredicted RBP16.17■□□□□ 0.18
RPP40-203ENST00000464646 BRDTQ58F21 947 aaPredicted RBP16.17■□□□□ 0.18
RPP40-203ENST00000464646 FAM47CQ5HY64 1035 aa16.17■□□□□ 0.18
RPP40-203ENST00000464646 TMEM63BQ5T3F8 832 aa16.17■□□□□ 0.18
RPP40-203ENST00000464646 FAM109BQ6ICB4 259 aaPredicted RBP16.17■□□□□ 0.18
RPP40-203ENST00000464646 MFSD5Q6N075 450 aa16.17■□□□□ 0.18
RPP40-203ENST00000464646 DGKHQ86XP1 1220 aa16.17■□□□□ 0.18
RPP40-203ENST00000464646 GUCD1Q96NT3 240 aa16.17■□□□□ 0.18
RPP40-203ENST00000464646 DSCC1Q9BVC3 393 aa16.17■□□□□ 0.18
RPP40-203ENST00000464646 RANBP2P49792 3224 aaKnown RBP16.17■□□□□ 0.18
RPP40-203ENST00000464646 LCTP09848 1927 aa16.16■□□□□ 0.18
RPP40-203ENST00000464646 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.16■□□□□ 0.18
RPP40-203ENST00000464646 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.16■□□□□ 0.18
RPP40-203ENST00000464646 PARP1P09874 1014 aaKnown RBP16.16■□□□□ 0.18
RPP40-203ENST00000464646 CSF2RAP15509 400 aa16.16■□□□□ 0.18
RPP40-203ENST00000464646 CYP2C18P33260 490 aa16.16■□□□□ 0.18
RPP40-203ENST00000464646 TRDNQ13061 729 aa16.16■□□□□ 0.18
RPP40-203ENST00000464646 PPP2R5BQ15173 497 aa16.16■□□□□ 0.18
RPP40-203ENST00000464646 IFIT1BQ5T764 474 aaKnown RBP16.16■□□□□ 0.18
RPP40-203ENST00000464646 FAM126BQ8IXS8 530 aa16.16■□□□□ 0.18
RPP40-203ENST00000464646 CLEC4DQ8WXI8 215 aa16.16■□□□□ 0.18
RPP40-203ENST00000464646 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.16■□□□□ 0.18
RPP40-203ENST00000464646 SEMA6BQ9H3T3 888 aa16.16■□□□□ 0.18
RPP40-203ENST00000464646 CNNM2Q9H8M5 875 aa16.16■□□□□ 0.18
RPP40-203ENST00000464646 TBX21Q9UL17 535 aa16.16■□□□□ 0.18
RPP40-203ENST00000464646 TNKSO95271 1327 aa16.16■□□□□ 0.18
RPP40-203ENST00000464646 LAMA4Q16363 1823 aa16.15■□□□□ 0.18
RPP40-203ENST00000464646 LRRC37A2A6NM11 1700 aa16.15■□□□□ 0.18
RPP40-203ENST00000464646 CTAGE5O15320 804 aa16.15■□□□□ 0.18
RPP40-203ENST00000464646 CPT1AP50416 773 aa16.15■□□□□ 0.18
RPP40-203ENST00000464646 CCL23P55773 120 aa16.15■□□□□ 0.18
RPP40-203ENST00000464646 DUSP28Q4G0W2 176 aa16.15■□□□□ 0.18
RPP40-203ENST00000464646 ADGRF4Q8IZF3 695 aa16.15■□□□□ 0.18
RPP40-203ENST00000464646 RUFY2Q8WXA3 655 aa16.15■□□□□ 0.18
RPP40-203ENST00000464646 MYLIPQ8WY64 445 aa16.15■□□□□ 0.18
RPP40-203ENST00000464646 CDX2Q99626 313 aaPredicted RBP16.15■□□□□ 0.18
RPP40-203ENST00000464646 HIPK3Q9H422 1215 aa16.15■□□□□ 0.18
RPP40-203ENST00000464646 POLR3EQ9NVU0 708 aa16.15■□□□□ 0.18
RPP40-203ENST00000464646 ZSWIM5Q9P217 1185 aa16.15■□□□□ 0.18
RPP40-203ENST00000464646 Q9Y3F1 56 aa16.15■□□□□ 0.18
RPP40-203ENST00000464646 WDR19Q8NEZ3 1342 aa16.15■□□□□ 0.18
RPP40-203ENST00000464646 RAD50Q92878 1312 aa16.15■□□□□ 0.18
RPP40-203ENST00000464646 SNHG28P0DPA3 235 aa16.14■□□□□ 0.17
RPP40-203ENST00000464646 ASPRV1Q53RT3 343 aa16.14■□□□□ 0.17
RPP40-203ENST00000464646 SEPT14Q6ZU15 432 aa16.14■□□□□ 0.17
RPP40-203ENST00000464646 ZNF365Q70YC5 407 aa16.14■□□□□ 0.17
RPP40-203ENST00000464646 ENAHQ8N8S7 591 aaPredicted RBP16.14■□□□□ 0.17
RPP40-203ENST00000464646 TRPV6Q9H1D0 765 aa16.14■□□□□ 0.17
RPP40-203ENST00000464646 ABCB11O95342 1321 aa16.14■□□□□ 0.17
RPP40-203ENST00000464646 ERICH2A1L162 156 aa16.13■□□□□ 0.17
RPP40-203ENST00000464646 TXNP10599 105 aaKnown RBP16.13■□□□□ 0.17
RPP40-203ENST00000464646 FOSL2P15408 326 aa16.13■□□□□ 0.17
RPP40-203ENST00000464646 TTC22Q5TAA0 569 aa16.13■□□□□ 0.17
RPP40-203ENST00000464646 PSRC1Q6PGN9 363 aaPredicted RBP16.13■□□□□ 0.17
RPP40-203ENST00000464646 CHST3Q7LGC8 479 aa16.13■□□□□ 0.17
RPP40-203ENST00000464646 FBXO11Q86XK2 927 aa16.13■□□□□ 0.17
RPP40-203ENST00000464646 DNERQ8NFT8 737 aa16.13■□□□□ 0.17
RPP40-203ENST00000464646 MORC4Q8TE76 937 aa16.13■□□□□ 0.17
RPP40-203ENST00000464646 PPP1R13LQ8WUF5 828 aa16.13■□□□□ 0.17
RPP40-203ENST00000464646 COPS5Q92905 334 aa16.13■□□□□ 0.17
RPP40-203ENST00000464646 MTIF3Q9H2K0 278 aaKnown RBP16.13■□□□□ 0.17
RPP40-203ENST00000464646 ZBBXA8MT70 800 aa16.12■□□□□ 0.17
RPP40-203ENST00000464646 B4GALT4O60513 344 aa16.12■□□□□ 0.17
RPP40-203ENST00000464646 CFBP00751 764 aa16.12■□□□□ 0.17
RPP40-203ENST00000464646 FGBP02675 491 aa16.12■□□□□ 0.17
RPP40-203ENST00000464646 DNAJB2P25686 324 aa16.12■□□□□ 0.17
RPP40-203ENST00000464646 PDE4AP27815 886 aa16.12■□□□□ 0.17
RPP40-203ENST00000464646 NT5C2P49902 561 aa16.12■□□□□ 0.17
RPP40-203ENST00000464646 TTLL4Q14679 1199 aa16.12■□□□□ 0.17
RPP40-203ENST00000464646 QRICH1Q2TAL8 776 aa16.12■□□□□ 0.17
RPP40-203ENST00000464646 TMEM240Q5SV17 173 aa16.12■□□□□ 0.17
RPP40-203ENST00000464646 ARHGEF16Q5VV41 709 aa16.12■□□□□ 0.17
RPP40-203ENST00000464646 RALYLQ86SE5 291 aaKnown RBP16.12■□□□□ 0.17
RPP40-203ENST00000464646 MCF2L2Q86YR7 1114 aa16.12■□□□□ 0.17
RPP40-203ENST00000464646 MAFAQ8NHW3 353 aaPredicted RBP16.12■□□□□ 0.17
RPP40-203ENST00000464646 SCFD2Q8WU76 684 aa16.12■□□□□ 0.17
RPP40-203ENST00000464646 TBC1D5Q92609 795 aa16.12■□□□□ 0.17
RPP40-203ENST00000464646 TAAR1Q96RJ0 339 aa16.12■□□□□ 0.17
RPP40-203ENST00000464646 TTYH1Q9H313 450 aaPredicted RBP16.12■□□□□ 0.17
RPP40-203ENST00000464646 NOD1Q9Y239 953 aa16.12■□□□□ 0.17
RPP40-203ENST00000464646 MRPL11Q9Y3B7 192 aaKnown RBP16.12■□□□□ 0.17
RPP40-203ENST00000464646 LOC102724159A0A0B4J2E5 919 aa16.11■□□□□ 0.17
RPP40-203ENST00000464646 GRXCR1A8MXD5 290 aa16.11■□□□□ 0.17
RPP40-203ENST00000464646 NKRFO15226 690 aaKnown RBP eCLIP16.11■□□□□ 0.17
RPP40-203ENST00000464646 CD4P01730 458 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms