RNA–Protein interactions for RNA: ENST00000464628.1

SCAF8-205, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 5

Gene SCAF8, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-205ENST00000464628 BAHCC1Q9P281 2608 aa13.79□□□□□ -0.2
SCAF8-205ENST00000464628 RIF1Q5UIP0 2472 aaKnown RBP13.79□□□□□ -0.2
SCAF8-205ENST00000464628 STXBP3O00186 592 aa13.78□□□□□ -0.2
SCAF8-205ENST00000464628 CXCL10P02778 98 aa13.78□□□□□ -0.2
SCAF8-205ENST00000464628 SIGLEC14Q08ET2 396 aa13.78□□□□□ -0.2
SCAF8-205ENST00000464628 SMAD4Q13485 552 aaKnown RBP13.78□□□□□ -0.2
SCAF8-205ENST00000464628 LRRFIP1Q32MZ4 808 aaKnown RBP13.78□□□□□ -0.2
SCAF8-205ENST00000464628 CNKSR3Q6P9H4 555 aa13.78□□□□□ -0.2
SCAF8-205ENST00000464628 DYNLL2Q96FJ2 89 aa13.78□□□□□ -0.2
SCAF8-205ENST00000464628 ZNF512BQ96KM6 892 aaPredicted RBP13.78□□□□□ -0.2
SCAF8-205ENST00000464628 CNTNAP3BQ96NU0 1288 aa13.78□□□□□ -0.2
SCAF8-205ENST00000464628 CTAGE1Q96RT6 745 aa13.78□□□□□ -0.2
SCAF8-205ENST00000464628 NUP88Q99567 741 aaPredicted RBP13.78□□□□□ -0.2
SCAF8-205ENST00000464628 CNTNAP3Q9BZ76 1288 aa13.78□□□□□ -0.2
SCAF8-205ENST00000464628 H3BNC9 293 aa13.77□□□□□ -0.21
SCAF8-205ENST00000464628 TBX10O75333 385 aa13.77□□□□□ -0.21
SCAF8-205ENST00000464628 IDH1O75874 414 aaKnown RBP13.77□□□□□ -0.21
SCAF8-205ENST00000464628 BFSP2Q13515 415 aa13.77□□□□□ -0.21
SCAF8-205ENST00000464628 NBPF20Q3BBV1 942 aa13.77□□□□□ -0.21
SCAF8-205ENST00000464628 EPC2Q52LR7 807 aa13.77□□□□□ -0.21
SCAF8-205ENST00000464628 CFAP47Q6ZTR5 3102 aa13.77□□□□□ -0.21
SCAF8-205ENST00000464628 FBXO16Q8IX29 292 aaPredicted RBP13.77□□□□□ -0.21
SCAF8-205ENST00000464628 CPXCR1Q8N123 301 aa13.77□□□□□ -0.21
SCAF8-205ENST00000464628 POLR3EQ9NVU0 708 aa13.77□□□□□ -0.21
SCAF8-205ENST00000464628 MCM9Q9NXL9 1143 aa13.77□□□□□ -0.21
SCAF8-205ENST00000464628 SWAP70Q9UH65 585 aa13.77□□□□□ -0.21
SCAF8-205ENST00000464628 LOC730098B7Z3J9 87 aa13.76□□□□□ -0.21
SCAF8-205ENST00000464628 GALR2O43603 387 aaPredicted RBP13.76□□□□□ -0.21
SCAF8-205ENST00000464628 NBNO60934 754 aa13.76□□□□□ -0.21
SCAF8-205ENST00000464628 SLC4A3P48751 1232 aa13.76□□□□□ -0.21
SCAF8-205ENST00000464628 NUBP1P53384 320 aa13.76□□□□□ -0.21
SCAF8-205ENST00000464628 HTRA4P83105 476 aaPredicted RBP13.76□□□□□ -0.21
SCAF8-205ENST00000464628 MKRN4PQ13434 485 aaPredicted RBP13.76□□□□□ -0.21
SCAF8-205ENST00000464628 FAM47CQ5HY64 1035 aa13.76□□□□□ -0.21
SCAF8-205ENST00000464628 IQSEC1Q6DN90 963 aa13.76□□□□□ -0.21
SCAF8-205ENST00000464628 FAM117BQ6P1L5 589 aa13.76□□□□□ -0.21
SCAF8-205ENST00000464628 NFRKBQ6P4R8 1299 aa13.76□□□□□ -0.21
SCAF8-205ENST00000464628 CHST13Q8NET6 341 aa13.76□□□□□ -0.21
SCAF8-205ENST00000464628 AFAP1L1Q8TED9 768 aa13.76□□□□□ -0.21
SCAF8-205ENST00000464628 RAVER2Q9HCJ3 691 aaKnown RBP13.76□□□□□ -0.21
SCAF8-205ENST00000464628 GOPCQ9HD26 462 aa13.76□□□□□ -0.21
SCAF8-205ENST00000464628 FBXO40Q9UH90 709 aa13.76□□□□□ -0.21
SCAF8-205ENST00000464628 ABHD14A-ACY1A0A1B0GW23 586 aa13.75□□□□□ -0.21
SCAF8-205ENST00000464628 GPM6BQ13491 265 aa13.75□□□□□ -0.21
SCAF8-205ENST00000464628 CBX2Q14781 532 aaPredicted RBP13.75□□□□□ -0.21
SCAF8-205ENST00000464628 TNNI3KQ59H18 835 aa13.75□□□□□ -0.21
SCAF8-205ENST00000464628 CCDC158Q5M9N0 1113 aa13.75□□□□□ -0.21
SCAF8-205ENST00000464628 SAMD11Q96NU1 681 aa13.75□□□□□ -0.21
SCAF8-205ENST00000464628 MTG1Q9BT17 334 aaPredicted RBP13.75□□□□□ -0.21
SCAF8-205ENST00000464628 SLC38A10Q9HBR0 1119 aa13.75□□□□□ -0.21
SCAF8-205ENST00000464628 DCP1AQ9NPI6 582 aaPredicted RBP13.75□□□□□ -0.21
SCAF8-205ENST00000464628 GPR108Q9NPR9 543 aa13.75□□□□□ -0.21
SCAF8-205ENST00000464628 A1CFQ9NQ94 594 aaKnown RBP13.75□□□□□ -0.21
SCAF8-205ENST00000464628 FPGT-TNNI3KV9GXZ4 949 aa13.75□□□□□ -0.21
SCAF8-205ENST00000464628 WDR87Q6ZQQ6 2873 aa13.74□□□□□ -0.21
SCAF8-205ENST00000464628 MYO7AQ13402 2215 aa13.74□□□□□ -0.21
SCAF8-205ENST00000464628 ASB14A6NK59 587 aa13.74□□□□□ -0.21
SCAF8-205ENST00000464628 MYL3P08590 195 aa13.74□□□□□ -0.21
SCAF8-205ENST00000464628 PTPN11Q06124 597 aaPredicted RBP13.74□□□□□ -0.21
SCAF8-205ENST00000464628 HYAL1Q12794 435 aa13.74□□□□□ -0.21
SCAF8-205ENST00000464628 DUSP28Q4G0W2 176 aa13.74□□□□□ -0.21
SCAF8-205ENST00000464628 EEPD1Q7L9B9 569 aa13.74□□□□□ -0.21
SCAF8-205ENST00000464628 ADSSL1Q8N142 457 aa13.74□□□□□ -0.21
SCAF8-205ENST00000464628 PRPF38AQ8NAV1 312 aaKnown RBP13.74□□□□□ -0.21
SCAF8-205ENST00000464628 CAGE1Q8TC20 777 aa13.74□□□□□ -0.21
SCAF8-205ENST00000464628 SDR42E1Q8WUS8 393 aa13.74□□□□□ -0.21
SCAF8-205ENST00000464628 DHX38Q92620 1227 aaKnown RBP13.74□□□□□ -0.21
SCAF8-205ENST00000464628 RMDN1Q96DB5 314 aa13.74□□□□□ -0.21
SCAF8-205ENST00000464628 CRBNQ96SW2 442 aa13.74□□□□□ -0.21
SCAF8-205ENST00000464628 ANTXR1Q9H6X2 564 aa13.74□□□□□ -0.21
SCAF8-205ENST00000464628 INSL6Q9Y581 213 aa13.74□□□□□ -0.21
SCAF8-205ENST00000464628 NCOR2Q9Y618 2525 aa13.74□□□□□ -0.21
SCAF8-205ENST00000464628 KIAA1671Q9BY89 1806 aa13.74□□□□□ -0.21
SCAF8-205ENST00000464628 KDM4AO75164 1064 aa13.73□□□□□ -0.21
SCAF8-205ENST00000464628 PDGFBP01127 241 aaPredicted RBP13.73□□□□□ -0.21
SCAF8-205ENST00000464628 RBL2Q08999 1139 aa13.73□□□□□ -0.21
SCAF8-205ENST00000464628 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.73□□□□□ -0.21
SCAF8-205ENST00000464628 LRRC8DQ7L1W4 858 aa13.73□□□□□ -0.21
SCAF8-205ENST00000464628 CCDC17Q96LX7 622 aa13.73□□□□□ -0.21
SCAF8-205ENST00000464628 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.73□□□□□ -0.21
SCAF8-205ENST00000464628 HDAC5Q9UQL6 1122 aa13.73□□□□□ -0.21
SCAF8-205ENST00000464628 LINC01565O15544 149 aa13.72□□□□□ -0.21
SCAF8-205ENST00000464628 NCK2O43639 380 aa13.72□□□□□ -0.21
SCAF8-205ENST00000464628 RAD21O60216 631 aa13.72□□□□□ -0.21
SCAF8-205ENST00000464628 EFCAB14O75071 495 aa13.72□□□□□ -0.21
SCAF8-205ENST00000464628 ZBED4O75132 1171 aa13.72□□□□□ -0.21
SCAF8-205ENST00000464628 SELPP16109 830 aa13.72□□□□□ -0.21
SCAF8-205ENST00000464628 CPT1AP50416 773 aa13.72□□□□□ -0.21
SCAF8-205ENST00000464628 OAZ1P54368 228 aa13.72□□□□□ -0.21
SCAF8-205ENST00000464628 TRAF7Q6Q0C0 670 aa13.72□□□□□ -0.21
SCAF8-205ENST00000464628 FRMD5Q7Z6J6 570 aa13.72□□□□□ -0.21
SCAF8-205ENST00000464628 FBXO11Q86XK2 927 aa13.72□□□□□ -0.21
SCAF8-205ENST00000464628 MORC4Q8TE76 937 aa13.72□□□□□ -0.21
SCAF8-205ENST00000464628 NKD2Q969F2 451 aaPredicted RBP13.72□□□□□ -0.21
SCAF8-205ENST00000464628 MSLNLQ96KJ4 702 aa13.72□□□□□ -0.21
SCAF8-205ENST00000464628 CRNKL1Q9BZJ0 848 aaKnown RBP13.72□□□□□ -0.21
SCAF8-205ENST00000464628 ACAD9Q9H845 621 aa13.72□□□□□ -0.21
SCAF8-205ENST00000464628 KANSL2Q9H9L4 492 aa13.72□□□□□ -0.21
SCAF8-205ENST00000464628 VTA1Q9NP79 307 aa13.72□□□□□ -0.21
SCAF8-205ENST00000464628 HOMER2Q9NSB8 354 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms